data_XWG # _chem_comp.id XWG _chem_comp.name "(3AS,4R,5S,8AS,8BR)-4-[5-(5-CHLOROTHIOPHEN-2-YL)-1,2-OXAZOL-3-YL]-2-[3-[1-(2-HYDROXYETHYL)PYRROLIDIN-1-IUM-1-YL]PROPYL]-4,6,7,8,8A,8B-HEXAHYDRO-3AH-PYRROLO[3,4-A]PYRROLIZINE-1,3-DIONE" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H32 Cl N4 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2011-01-13 _chem_comp.pdbx_modified_date 2011-12-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 520.064 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XWG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2Y5F _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XWG CL1 CL1 CL 0 0 N N N -0.504 5.701 27.995 -8.023 2.111 0.133 CL1 XWG 1 XWG C25 C25 C 0 1 Y N N -1.277 7.273 27.584 -6.321 1.779 0.045 C25 XWG 2 XWG C24 C24 C 0 1 Y N N -2.377 7.822 28.191 -5.362 2.706 -0.071 C24 XWG 3 XWG C22 C22 C 0 1 Y N N -2.699 9.032 27.580 -4.076 2.215 -0.123 C22 XWG 4 XWG S1 S1 S 0 1 Y N N -0.544 8.175 26.336 -5.601 0.176 0.102 S1 XWG 5 XWG C20 C20 C 0 1 Y N N -1.792 9.334 26.582 -3.987 0.858 -0.048 C20 XWG 6 XWG C17 C17 C 0 1 Y N N -1.818 10.432 25.731 -2.737 0.086 -0.079 C17 XWG 7 XWG C16 C16 C 0 1 Y N N -2.906 11.140 25.311 -2.608 -1.279 0.001 C16 XWG 8 XWG O10 O10 O 0 1 Y N N -0.709 10.819 25.088 -1.488 0.572 -0.198 O10 XWG 9 XWG N9 N9 N 0 1 Y N N -1.044 11.891 24.256 -0.667 -0.315 -0.193 N9 XWG 10 XWG C4 C4 C 0 1 Y N N -2.347 12.075 24.373 -1.219 -1.491 -0.076 C4 XWG 11 XWG C1 C1 C 0 1 N N R -3.159 13.118 23.647 -0.507 -2.819 -0.032 C1 XWG 12 XWG N3 N3 N 0 1 N N N -4.504 13.452 24.166 0.412 -2.872 1.129 N3 XWG 13 XWG C7 C7 C 0 1 N N S -5.135 14.222 23.074 1.426 -3.902 0.759 C7 XWG 14 XWG C14 C14 C 0 1 N N N -4.735 15.677 23.314 0.721 -5.253 0.989 C14 XWG 15 XWG C15 C15 C 0 1 N N N -4.418 15.766 24.803 -0.418 -4.956 1.985 C15 XWG 16 XWG C8 C8 C 0 1 N N N -4.442 14.334 25.341 -0.299 -3.450 2.295 C8 XWG 17 XWG C5 C5 C 0 1 N N R -4.622 13.623 21.771 1.664 -3.707 -0.750 C5 XWG 18 XWG C2 C2 C 0 1 N N S -3.434 12.759 22.177 0.396 -2.982 -1.271 C2 XWG 19 XWG C6 C6 C 0 1 N N N -3.927 11.350 21.965 0.916 -1.627 -1.696 C6 XWG 20 XWG O13 O13 O 0 1 N N N -3.281 10.301 22.125 0.243 -0.732 -2.160 O13 XWG 21 XWG C11 C11 C 0 1 N N N -5.597 12.627 21.226 2.759 -2.684 -0.953 C11 XWG 22 XWG O18 O18 O 0 1 N N N -6.593 12.887 20.553 3.930 -2.847 -0.683 O18 XWG 23 XWG N12 N12 N 0 1 N N N -5.269 11.358 21.652 2.235 -1.571 -1.479 N12 XWG 24 XWG C19 C19 C 0 1 N N N -5.938 10.152 21.106 3.039 -0.387 -1.793 C19 XWG 25 XWG C21 C21 C 0 1 N N N -5.523 9.677 19.729 3.080 0.539 -0.576 C21 XWG 26 XWG C23 C23 C 0 1 N N N -6.425 8.494 19.397 3.921 1.775 -0.903 C23 XWG 27 XWG N29 N29 N 1 1 N N N -6.242 7.900 18.057 3.855 2.722 0.217 N29 XWG 28 XWG C34 C34 C 0 1 N N N -6.346 8.881 16.937 4.284 2.056 1.455 C34 XWG 29 XWG C35 C35 C 0 1 N N N -7.591 9.770 16.981 5.661 1.423 1.242 C35 XWG 30 XWG O36 O36 O 0 1 N N N -8.744 8.966 16.762 6.630 2.450 1.029 O36 XWG 31 XWG C31 C31 C 0 1 N N N -7.234 6.811 17.890 2.470 3.213 0.374 C31 XWG 32 XWG C33 C33 C 0 1 N N N -6.582 5.536 18.402 2.620 4.695 0.798 C33 XWG 33 XWG C32 C32 C 0 1 N N N -5.114 5.735 18.101 3.847 5.138 -0.042 C32 XWG 34 XWG C30 C30 C 0 1 N N N -4.922 7.235 18.009 4.733 3.875 -0.056 C30 XWG 35 XWG H24 H24 H 0 1 N N N -2.914 7.382 29.019 -5.581 3.762 -0.120 H24 XWG 36 XWG H22 H22 H 0 1 N N N -3.543 9.650 27.850 -3.210 2.854 -0.216 H22 XWG 37 XWG H16 H16 H 0 1 N N N -3.937 11.026 25.611 -3.390 -2.017 0.101 H16 XWG 38 XWG H1 H1 H 0 1 N N N -2.486 13.975 23.799 -1.229 -3.634 0.019 H1 XWG 39 XWG H7 H7 H 0 1 N N N -6.233 14.181 23.031 2.339 -3.812 1.348 H7 XWG 40 XWG H82 H82 H 0 1 N N N -5.319 14.179 25.987 0.280 -3.295 3.205 H82 XWG 41 XWG H81 H81 H 0 1 N N N -3.551 14.123 25.951 -1.289 -3.004 2.394 H81 XWG 42 XWG H5 H5 H 0 1 N N N -4.422 14.426 21.046 1.866 -4.646 -1.266 H5 XWG 43 XWG H2 H2 H 0 1 N N N -2.495 12.895 21.621 -0.097 -3.523 -2.079 H2 XWG 44 XWG H141 H141 H 0 0 N N N -3.857 15.947 22.709 0.313 -5.630 0.051 H141 XWG 45 XWG H142 H142 H 0 0 N N N -5.535 16.374 23.024 1.417 -5.975 1.416 H142 XWG 46 XWG H151 H151 H 0 0 N N N -5.168 16.383 25.319 -1.384 -5.174 1.530 H151 XWG 47 XWG H152 H152 H 0 0 N N N -3.437 16.235 24.971 -0.287 -5.543 2.894 H152 XWG 48 XWG H191 H191 H 0 0 N N N -5.727 9.328 21.803 4.053 -0.695 -2.050 H191 XWG 49 XWG H192 H192 H 0 0 N N N -6.994 10.439 20.999 2.595 0.141 -2.637 H192 XWG 50 XWG H211 H211 H 0 0 N N N -5.651 10.480 18.988 2.066 0.846 -0.319 H211 XWG 51 XWG H212 H212 H 0 0 N N N -4.462 9.388 19.710 3.524 0.011 0.268 H212 XWG 52 XWG H231 H231 H 0 0 N N N -6.220 7.706 20.137 4.956 1.477 -1.068 H231 XWG 53 XWG H232 H232 H 0 0 N N N -7.453 8.884 19.416 3.532 2.250 -1.804 H232 XWG 54 XWG H341 H341 H 0 0 N N N -5.464 9.536 16.981 4.342 2.789 2.260 H341 XWG 55 XWG H342 H342 H 0 0 N N N -6.412 8.293 16.010 3.565 1.282 1.719 H342 XWG 56 XWG H311 H311 H 0 0 N N N -8.145 7.032 18.466 1.932 3.141 -0.571 H311 XWG 57 XWG H312 H312 H 0 0 N N N -7.527 6.705 16.835 1.952 2.647 1.150 H312 XWG 58 XWG H301 H301 H 0 0 N N N -4.419 7.484 17.063 5.498 3.950 0.717 H301 XWG 59 XWG H302 H302 H 0 0 N N N -4.305 7.580 18.852 5.201 3.761 -1.033 H302 XWG 60 XWG H351 H351 H 0 0 N N N -7.662 10.257 17.965 5.933 0.842 2.123 H351 XWG 61 XWG H352 H352 H 0 0 N N N -7.523 10.542 16.200 5.628 0.768 0.371 H352 XWG 62 XWG H36 H36 H 0 1 N N N -9.168 8.787 17.593 7.513 2.119 0.812 H36 XWG 63 XWG H331 H331 H 0 0 N N N -6.756 5.401 19.480 1.734 5.270 0.529 H331 XWG 64 XWG H332 H332 H 0 0 N N N -6.992 4.632 17.928 2.827 4.777 1.865 H332 XWG 65 XWG H321 H321 H 0 0 N N N -4.839 5.246 17.155 3.544 5.407 -1.054 H321 XWG 66 XWG H322 H322 H 0 0 N N N -4.475 5.289 18.878 4.363 5.969 0.438 H322 XWG 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XWG C1 C2 SING N N 1 XWG C1 N3 SING N N 2 XWG C1 C4 SING N N 3 XWG S1 C20 SING Y N 4 XWG S1 C25 SING Y N 5 XWG CL1 C25 SING N N 6 XWG C2 C5 SING N N 7 XWG C2 C6 SING N N 8 XWG N3 C7 SING N N 9 XWG N3 C8 SING N N 10 XWG C4 N9 DOUB Y N 11 XWG C4 C16 SING Y N 12 XWG C5 C7 SING N N 13 XWG C5 C11 SING N N 14 XWG C6 N12 SING N N 15 XWG C6 O13 DOUB N N 16 XWG C7 C14 SING N N 17 XWG C8 C15 SING N N 18 XWG N9 O10 SING Y N 19 XWG O10 C17 SING Y N 20 XWG C11 N12 SING N N 21 XWG C11 O18 DOUB N N 22 XWG N12 C19 SING N N 23 XWG C14 C15 SING N N 24 XWG C16 C17 DOUB Y N 25 XWG C17 C20 SING Y N 26 XWG C19 C21 SING N N 27 XWG C20 C22 DOUB Y N 28 XWG C21 C23 SING N N 29 XWG C22 C24 SING Y N 30 XWG C23 N29 SING N N 31 XWG C24 C25 DOUB Y N 32 XWG N29 C30 SING N N 33 XWG N29 C31 SING N N 34 XWG N29 C34 SING N N 35 XWG C30 C32 SING N N 36 XWG C31 C33 SING N N 37 XWG C32 C33 SING N N 38 XWG C34 C35 SING N N 39 XWG C35 O36 SING N N 40 XWG C24 H24 SING N N 41 XWG C22 H22 SING N N 42 XWG C16 H16 SING N N 43 XWG C1 H1 SING N N 44 XWG C7 H7 SING N N 45 XWG C8 H82 SING N N 46 XWG C8 H81 SING N N 47 XWG C5 H5 SING N N 48 XWG C2 H2 SING N N 49 XWG C14 H141 SING N N 50 XWG C14 H142 SING N N 51 XWG C15 H151 SING N N 52 XWG C15 H152 SING N N 53 XWG C19 H191 SING N N 54 XWG C19 H192 SING N N 55 XWG C21 H211 SING N N 56 XWG C21 H212 SING N N 57 XWG C23 H231 SING N N 58 XWG C23 H232 SING N N 59 XWG C34 H341 SING N N 60 XWG C34 H342 SING N N 61 XWG C31 H311 SING N N 62 XWG C31 H312 SING N N 63 XWG C30 H301 SING N N 64 XWG C30 H302 SING N N 65 XWG C35 H351 SING N N 66 XWG C35 H352 SING N N 67 XWG O36 H36 SING N N 68 XWG C33 H331 SING N N 69 XWG C33 H332 SING N N 70 XWG C32 H321 SING N N 71 XWG C32 H322 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XWG SMILES_CANONICAL CACTVS 3.352 "OCC[N+]1(CCCC1)CCCN2C(=O)[C@H]3[C@@H]4CCCN4[C@H]([C@H]3C2=O)c5cc(on5)c6sc(Cl)cc6" XWG SMILES CACTVS 3.352 "OCC[N+]1(CCCC1)CCCN2C(=O)[CH]3[CH]4CCCN4[CH]([CH]3C2=O)c5cc(on5)c6sc(Cl)cc6" XWG SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "c1cc(sc1c2cc(no2)[C@H]3[C@@H]4[C@H]([C@H]5[N@@]3CCC5)C(=O)N(C4=O)CCC[N+]6(CCCC6)CCO)Cl" XWG SMILES "OpenEye OEToolkits" 1.6.1 "c1cc(sc1c2cc(no2)C3C4C(C5N3CCC5)C(=O)N(C4=O)CCC[N+]6(CCCC6)CCO)Cl" XWG InChI InChI 1.03 "InChI=1S/C25H32ClN4O4S/c26-20-7-6-19(35-20)18-15-16(27-34-18)23-22-21(17-5-3-8-28(17)23)24(32)29(25(22)33)9-4-12-30(13-14-31)10-1-2-11-30/h6-7,15,17,21-23,31H,1-5,8-14H2/q+1/t17-,21-,22-,23-/m0/s1" XWG InChIKey InChI 1.03 NGWQPUFWVMNLQW-ZMVGRULKSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XWG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(3aS,4R,5S,8aS,8bR)-4-[5-(5-chlorothiophen-2-yl)-1,2-oxazol-3-yl]-2-[3-[1-(2-hydroxyethyl)pyrrolidin-1-ium-1-yl]propyl]-4,6,7,8,8a,8b-hexahydro-3aH-pyrrolo[3,4-a]pyrrolizine-1,3-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XWG "Create component" 2011-01-13 EBI XWG "Modify aromatic_flag" 2011-06-04 RCSB XWG "Modify descriptor" 2011-06-04 RCSB #