data_XX8
#
_chem_comp.id XX8
_chem_comp.name "{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]phenyl}methanol"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C13 H15 N3 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2013-10-15
_chem_comp.pdbx_modified_date 2014-09-12
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 229.278
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code XX8
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4N4D
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XX8 CM2 CM2 C 0 1 N N N 19.781 1.303 21.468 -4.651 0.923 1.406 CM2 XX8 1
XX8 N4A N4A N 0 1 N N N 20.363 5.186 18.516 -0.860 1.642 -1.436 N4A XX8 2
XX8 O01 O01 O 0 1 N N N 24.956 5.770 20.809 3.371 2.345 0.954 O01 XX8 3
XX8 C6 C6 C 0 1 N N N 25.230 6.718 19.708 3.816 1.398 -0.018 C6 XX8 4
XX8 C2 C2 C 0 1 Y N N 23.875 5.331 15.850 1.377 -2.103 0.179 C2 XX8 5
XX8 C5 C5 C 0 1 Y N N 24.721 6.210 18.390 2.955 0.163 0.052 C5 XX8 6
XX8 C4 C4 C 0 1 Y N N 23.735 5.202 18.297 1.813 0.072 -0.722 C4 XX8 7
XX8 C01 C01 C 0 1 Y N N 23.326 4.764 16.972 1.024 -1.060 -0.658 C01 XX8 8
XX8 C7A C7A C 0 1 N N N 22.234 3.668 16.739 -0.221 -1.160 -1.502 C7A XX8 9
XX8 C4A C4A C 0 1 Y N N 20.691 3.815 18.825 -1.664 0.764 -0.729 C4A XX8 10
XX8 N3A N3A N 0 1 Y N N 20.121 3.215 19.936 -2.709 1.211 -0.038 N3A XX8 11
XX8 C2A C2A C 0 1 Y N N 20.415 1.959 20.237 -3.476 0.377 0.635 C2A XX8 12
XX8 N1A N1A N 0 1 Y N N 21.255 1.235 19.491 -3.244 -0.919 0.655 N1A XX8 13
XX8 C6A C6A C 0 1 Y N N 21.837 1.744 18.365 -2.222 -1.441 -0.009 C6A XX8 14
XX8 C5A C5A C 0 1 Y N N 21.582 3.085 17.997 -1.394 -0.607 -0.734 C5A XX8 15
XX8 C28 C28 C 0 1 Y N N 25.271 6.748 17.280 3.308 -0.879 0.888 C28 XX8 16
XX8 C30 C30 C 0 1 Y N N 24.858 6.307 15.972 2.519 -2.012 0.952 C30 XX8 17
XX8 H1 H1 H 0 1 N N N 20.138 0.266 21.556 -5.532 0.936 0.764 H1 XX8 18
XX8 H2 H2 H 0 1 N N N 20.064 1.866 22.370 -4.842 0.291 2.273 H2 XX8 19
XX8 H3 H3 H 0 1 N N N 18.686 1.306 21.362 -4.428 1.938 1.737 H3 XX8 20
XX8 H4 H4 H 0 1 N N N 19.722 5.538 19.198 -1.058 2.592 -1.431 H4 XX8 21
XX8 H5 H5 H 0 1 N N N 21.197 5.738 18.526 -0.100 1.308 -1.938 H5 XX8 22
XX8 H6 H6 H 0 1 N N N 25.291 6.125 21.624 3.881 3.167 0.966 H6 XX8 23
XX8 H7 H7 H 0 1 N N N 26.317 6.872 19.634 3.742 1.837 -1.013 H7 XX8 24
XX8 H8 H8 H 0 1 N N N 24.739 7.676 19.933 4.853 1.130 0.184 H8 XX8 25
XX8 H9 H9 H 0 1 N N N 23.543 5.019 14.871 0.757 -2.986 0.232 H9 XX8 26
XX8 H10 H10 H 0 1 N N N 23.298 4.769 19.185 1.538 0.887 -1.376 H10 XX8 27
XX8 H11 H11 H 0 1 N N N 21.438 4.113 16.124 -0.085 -0.587 -2.419 H11 XX8 28
XX8 H12 H12 H 0 1 N N N 22.703 2.839 16.189 -0.410 -2.204 -1.750 H12 XX8 29
XX8 H13 H13 H 0 1 N N N 22.486 1.127 17.761 -2.041 -2.505 0.014 H13 XX8 30
XX8 H14 H14 H 0 1 N N N 26.026 7.515 17.374 4.201 -0.808 1.492 H14 XX8 31
XX8 H15 H15 H 0 1 N N N 25.311 6.733 15.089 2.794 -2.826 1.606 H15 XX8 32
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XX8 C2 C30 DOUB Y N 1
XX8 C2 C01 SING Y N 2
XX8 C30 C28 SING Y N 3
XX8 C7A C01 SING N N 4
XX8 C7A C5A SING N N 5
XX8 C01 C4 DOUB Y N 6
XX8 C28 C5 DOUB Y N 7
XX8 C5A C6A DOUB Y N 8
XX8 C5A C4A SING Y N 9
XX8 C4 C5 SING Y N 10
XX8 C6A N1A SING Y N 11
XX8 C5 C6 SING N N 12
XX8 N4A C4A SING N N 13
XX8 C4A N3A DOUB Y N 14
XX8 N1A C2A DOUB Y N 15
XX8 C6 O01 SING N N 16
XX8 N3A C2A SING Y N 17
XX8 C2A CM2 SING N N 18
XX8 CM2 H1 SING N N 19
XX8 CM2 H2 SING N N 20
XX8 CM2 H3 SING N N 21
XX8 N4A H4 SING N N 22
XX8 N4A H5 SING N N 23
XX8 O01 H6 SING N N 24
XX8 C6 H7 SING N N 25
XX8 C6 H8 SING N N 26
XX8 C2 H9 SING N N 27
XX8 C4 H10 SING N N 28
XX8 C7A H11 SING N N 29
XX8 C7A H12 SING N N 30
XX8 C6A H13 SING N N 31
XX8 C28 H14 SING N N 32
XX8 C30 H15 SING N N 33
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XX8 SMILES ACDLabs 12.01 "n1c(N)c(cnc1C)Cc2cccc(c2)CO"
XX8 InChI InChI 1.03 "InChI=1S/C13H15N3O/c1-9-15-7-12(13(14)16-9)6-10-3-2-4-11(5-10)8-17/h2-5,7,17H,6,8H2,1H3,(H2,14,15,16)"
XX8 InChIKey InChI 1.03 WCYNVVXZGIHJNV-UHFFFAOYSA-N
XX8 SMILES_CANONICAL CACTVS 3.385 "Cc1ncc(Cc2cccc(CO)c2)c(N)n1"
XX8 SMILES CACTVS 3.385 "Cc1ncc(Cc2cccc(CO)c2)c(N)n1"
XX8 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1ncc(c(n1)N)Cc2cccc(c2)CO"
XX8 SMILES "OpenEye OEToolkits" 1.7.6 "Cc1ncc(c(n1)N)Cc2cccc(c2)CO"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
XX8 "SYSTEMATIC NAME" ACDLabs 12.01 "{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]phenyl}methanol"
XX8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]phenyl]methanol"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XX8 "Create component" 2013-10-15 RCSB
XX8 "Initial release" 2014-09-17 RCSB
#