data_XXN # _chem_comp.id XXN _chem_comp.name "(3S)-4,7-dichloro-3-hydroxy-1,3-dihydro-2H-indol-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H5 Cl2 N O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-11-14 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 218.037 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XXN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GS6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XXN C4 C1 C 0 1 Y N N N N N -20.440 -7.020 -25.686 1.211 2.078 0.072 C4 XXN 1 XXN C5 C2 C 0 1 Y N N N N N -19.380 -6.280 -25.153 -0.145 2.344 0.018 C5 XXN 2 XXN C6 C3 C 0 1 Y N N N N N -19.602 -4.977 -24.684 -1.049 1.299 -0.077 C6 XXN 3 XXN C7 C4 C 0 1 N N N N N N -22.806 -3.158 -24.731 -0.174 -2.348 -0.207 C7 XXN 4 XXN N N1 N 0 1 N N N N N N -23.043 -4.355 -25.238 0.977 -1.660 -0.118 N XXN 5 XXN C C5 C 0 1 N N S N N N -21.449 -3.028 -24.378 -1.299 -1.335 -0.214 C XXN 6 XXN O O1 O 0 1 N N N N N N -21.423 -2.925 -22.959 -2.157 -1.531 0.911 O XXN 7 XXN C1 C6 C 0 1 Y N N N N N -20.886 -4.335 -24.727 -0.594 -0.002 -0.116 C1 XXN 8 XXN C2 C7 C 0 1 Y N N N N N -21.912 -5.089 -25.267 0.765 -0.281 -0.063 C2 XXN 9 XXN C3 C8 C 0 1 Y N N N N N -21.696 -6.424 -25.742 1.669 0.777 0.027 C3 XXN 10 XXN O1 O2 O 0 1 N N N N N N -23.815 -2.192 -24.569 -0.290 -3.553 -0.271 O1 XXN 11 XXN CL CL1 CL 0 0 N N N N N N -23.074 -7.335 -26.423 3.374 0.456 0.095 CL XXN 12 XXN CL1 CL2 CL 0 0 N N N N N N -18.196 -4.117 -24.030 -2.752 1.626 -0.144 CL1 XXN 13 XXN H1 H1 H 0 1 N N N N N N -20.288 -8.027 -26.045 1.915 2.894 0.145 H1 XXN 14 XXN H2 H2 H 0 1 N N N N N N -18.391 -6.711 -25.103 -0.499 3.364 0.049 H2 XXN 15 XXN H3 H3 H 0 1 N N N N N N -23.936 -4.672 -25.556 1.854 -2.074 -0.095 H3 XXN 16 XXN H4 H4 H 0 1 N N N N N N -20.938 -2.197 -24.886 -1.867 -1.401 -1.142 H4 XXN 17 XXN H5 H5 H 0 1 N N N N N N -22.260 -2.599 -22.649 -2.589 -2.396 0.930 H5 XXN 18 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XXN CL C3 SING N N 1 XXN C3 C4 DOUB Y N 2 XXN C3 C2 SING Y N 3 XXN C4 C5 SING Y N 4 XXN C2 N SING N N 5 XXN C2 C1 DOUB Y N 6 XXN N C7 SING N N 7 XXN C5 C6 DOUB Y N 8 XXN C7 O1 DOUB N N 9 XXN C7 C SING N N 10 XXN C1 C6 SING Y N 11 XXN C1 C SING N N 12 XXN C6 CL1 SING N N 13 XXN C O SING N N 14 XXN C4 H1 SING N N 15 XXN C5 H2 SING N N 16 XXN N H3 SING N N 17 XXN C H4 SING N N 18 XXN O H5 SING N N 19 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XXN SMILES ACDLabs 12.01 "Clc1ccc(Cl)c2c1NC(=O)C2O" XXN InChI InChI 1.06 "InChI=1S/C8H5Cl2NO2/c9-3-1-2-4(10)6-5(3)7(12)8(13)11-6/h1-2,7,12H,(H,11,13)/t7-/m0/s1" XXN InChIKey InChI 1.06 JSUBYQLEJVQEIU-ZETCQYMHSA-N XXN SMILES_CANONICAL CACTVS 3.385 "O[C@@H]1C(=O)Nc2c(Cl)ccc(Cl)c12" XXN SMILES CACTVS 3.385 "O[CH]1C(=O)Nc2c(Cl)ccc(Cl)c12" XXN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c2c(c1Cl)[C@@H](C(=O)N2)O)Cl" XXN SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c2c(c1Cl)C(C(=O)N2)O)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XXN "SYSTEMATIC NAME" ACDLabs 12.01 "(3S)-4,7-dichloro-3-hydroxy-1,3-dihydro-2H-indol-2-one" XXN "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{S})-4,7-bis(chloranyl)-3-oxidanyl-1,3-dihydroindol-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XXN "Create component" 2023-11-14 RCSB XXN "Initial release" 2024-02-14 RCSB XXN "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id XXN _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #