data_XYL
#

_chem_comp.id                                   XYL
_chem_comp.name                                 Xylitol
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C5 H12 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        D-Xylitol
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       152.146
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    XYL
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1XIG
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     XYL
_pdbx_chem_comp_synonyms.name        D-Xylitol
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XYL  C1   C1   C  0  1  N  N  N  37.063  33.623  56.120   0.691   0.183   2.498  C1   XYL   1  
XYL  C2   C2   C  0  1  N  N  S  35.719  33.984  56.718  -0.147   0.457   1.249  C2   XYL   2  
XYL  C3   C3   C  0  1  N  N  R  35.016  32.719  57.236   0.691   0.183   0.000  C3   XYL   3  
XYL  C4   C4   C  0  1  N  N  R  33.541  32.973  57.545  -0.147   0.457  -1.249  C4   XYL   4  
XYL  C5   C5   C  0  1  N  N  N  32.680  31.715  57.608   0.691   0.183  -2.498  C5   XYL   5  
XYL  O1   O1   O  0  1  N  N  N  37.649  34.732  55.851  -0.092   0.439   3.665  O1   XYL   6  
XYL  O2   O2   O  0  1  N  N  N  35.933  34.807  57.795  -1.294  -0.396   1.249  O2   XYL   7  
XYL  O3   O3   O  0  1  N  N  N  35.667  32.142  58.357   1.114  -1.181   0.000  O3   XYL   8  
XYL  O4   O4   O  0  1  N  N  N  33.323  33.709  58.737  -1.294  -0.396  -1.249  O4   XYL   9  
XYL  O5   O5   O  0  1  N  N  N  32.672  30.892  56.473  -0.092   0.439  -3.665  O5   XYL  10  
XYL  H11  H11  H  0  1  N  N  N  37.669  32.948  56.769   1.566   0.834   2.498  H11  XYL  11  
XYL  H12  H12  H  0  1  N  N  N  36.987  32.938  55.242   1.014  -0.858   2.498  H12  XYL  12  
XYL  H2   H2   H  0  1  N  N  N  35.091  34.478  55.939  -0.470   1.498   1.249  H2   XYL  13  
XYL  H3   H3   H  0  1  N  N  N  35.078  31.979  56.404   1.566   0.834   0.000  H3   XYL  14  
XYL  H4   H4   H  0  1  N  N  N  33.222  33.581  56.667  -0.470   1.498  -1.249  H4   XYL  15  
XYL  H51  H51  H  0  1  N  N  N  32.965  31.113  58.502   1.566   0.834  -2.498  H51  XYL  16  
XYL  H52  H52  H  0  1  N  N  N  31.633  31.993  57.872   1.014  -0.858  -2.498  H52  XYL  17  
XYL  HO1  HO1  H  0  1  N  N  N  38.491  34.505  55.475   0.472   0.254   4.427  HO1  XYL  18  
XYL  HO2  HO2  H  0  1  N  N  N  35.090  35.033  58.170  -0.965  -1.305   1.249  HO2  XYL  19  
XYL  HO3  HO3  H  0  1  N  N  N  35.232  31.360  58.677   0.312  -1.722   0.000  HO3  XYL  20  
XYL  HO4  HO4  H  0  1  N  N  N  32.406  33.866  58.929  -0.965  -1.305  -1.249  HO4  XYL  21  
XYL  HO5  HO5  H  0  1  N  N  N  32.135  30.108  56.512   0.472   0.254  -4.427  HO5  XYL  22  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XYL  C1  C2   SING  N  N   1  
XYL  C1  O1   SING  N  N   2  
XYL  C1  H11  SING  N  N   3  
XYL  C1  H12  SING  N  N   4  
XYL  C2  C3   SING  N  N   5  
XYL  C2  O2   SING  N  N   6  
XYL  C2  H2   SING  N  N   7  
XYL  C3  C4   SING  N  N   8  
XYL  C3  O3   SING  N  N   9  
XYL  C3  H3   SING  N  N  10  
XYL  C4  C5   SING  N  N  11  
XYL  C4  O4   SING  N  N  12  
XYL  C4  H4   SING  N  N  13  
XYL  C5  O5   SING  N  N  14  
XYL  C5  H51  SING  N  N  15  
XYL  C5  H52  SING  N  N  16  
XYL  O1  HO1  SING  N  N  17  
XYL  O2  HO2  SING  N  N  18  
XYL  O3  HO3  SING  N  N  19  
XYL  O4  HO4  SING  N  N  20  
XYL  O5  HO5  SING  N  N  21  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XYL  SMILES            ACDLabs               10.04  "OC(CO)C(O)C(O)CO"  
XYL  SMILES_CANONICAL  CACTVS                3.341  "OC[C@H](O)[C@@H](O)[C@H](O)CO"  
XYL  SMILES            CACTVS                3.341  "OC[CH](O)[CH](O)[CH](O)CO"  
XYL  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C([C@@H](C([C@@H](CO)O)O)O)O"  
XYL  SMILES            "OpenEye OEToolkits"  1.5.0  "C(C(C(C(CO)O)O)O)O"  
XYL  InChI             InChI                 1.03   "InChI=1S/C5H12O5/c6-1-3(8)5(10)4(9)2-7/h3-10H,1-2H2/t3-,4+,5+"  
XYL  InChIKey          InChI                 1.03   HEBKCHPVOIAQTA-SCDXWVJYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
XYL  "SYSTEMATIC NAME"  ACDLabs               10.04  D-xylitol  
XYL  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2S,4R)-pentane-1,2,3,4,5-pentol"  
#
_pdbx_chem_comp_feature.comp_id  XYL
_pdbx_chem_comp_feature.type     "CARBOHYDRATE ISOMER"
_pdbx_chem_comp_feature.value    D
_pdbx_chem_comp_feature.source   PDB
_pdbx_chem_comp_feature.support  ?
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XYL  "Create component"     1999-07-08  RCSB  
XYL  "Modify descriptor"    2011-06-04  RCSB  
XYL  "Other modification"   2020-07-03  RCSB  
XYL  "Modify name"          2020-07-17  RCSB  
XYL  "Modify synonyms"      2020-07-17  RCSB  
XYL  "Modify linking type"  2020-07-17  RCSB  
##