data_XYX # _chem_comp.id XYX _chem_comp.name "3-[7,7-bis(oxidanyl)-8-oxa-7-boranuidabicyclo[4.3.0]nona-1,3,5-trien-5-yl]-~{N}-[3-(4-ethanoylphenyl)phenyl]propanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H23 B N O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge -1 _chem_comp.pdbx_initial_date 2023-06-09 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 416.254 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XYX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8T1Q _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XYX C7 C1 C 0 1 Y N N N N N -29.443 -3.212 3.298 7.019 2.341 -0.542 C7 XYX 1 XYX C8 C2 C 0 1 Y N N N N N -28.716 -2.771 2.205 6.120 2.687 -1.536 C8 XYX 2 XYX C9 C3 C 0 1 Y N N N N N -27.614 -1.947 2.392 4.995 1.914 -1.753 C9 XYX 3 XYX O1 O1 O 0 1 N N N N N N -26.491 -2.435 6.926 4.893 -0.456 2.101 O1 XYX 4 XYX C1 C4 C 0 1 N N N N N N -25.636 0.165 2.648 2.427 0.386 -0.258 C1 XYX 5 XYX C5 C5 C 0 1 N N N N N N -29.716 -3.165 5.872 7.540 0.571 1.366 C5 XYX 6 XYX C6 C6 C 0 1 Y N N N N N -29.051 -2.814 4.572 6.790 1.223 0.229 C6 XYX 7 XYX C4 C7 C 0 1 Y N N N N N -27.942 -2.001 4.793 5.658 0.449 0.013 C4 XYX 8 XYX O4 O2 O 0 1 N N N N N N -28.112 4.996 -7.084 -9.608 0.786 0.165 O4 XYX 9 XYX C3 C8 C 0 1 Y N N N N N -27.209 -1.564 3.672 4.765 0.791 -0.978 C3 XYX 10 XYX O3 O3 O 0 1 N N N N N N -28.874 -2.582 6.897 7.031 -0.770 1.474 O3 XYX 11 XYX C2 C9 C 0 1 N N N N N N -25.969 -0.712 3.862 3.538 -0.052 -1.214 C2 XYX 12 XYX N N1 N 0 1 N N N N N N -27.340 1.129 1.244 0.088 -0.248 0.239 N XYX 13 XYX C C10 C 0 1 N N N N N N -26.660 1.247 2.402 1.200 -0.457 -0.494 C XYX 14 XYX O O4 O 0 1 N N N N N N -26.859 2.152 3.211 1.213 -1.323 -1.343 O XYX 15 XYX B B1 B -1 1 N N N N N N -27.757 -1.818 6.403 5.723 -0.716 1.046 B XYX 16 XYX C10 C11 C 0 1 Y N N N N N -28.354 2.002 0.792 -1.081 -0.964 -0.044 C10 XYX 17 XYX C11 C12 C 0 1 Y N N N N N -28.272 2.592 -0.462 -2.318 -0.356 0.102 C11 XYX 18 XYX C12 C13 C 0 1 Y N N N N N -29.248 3.483 -0.898 -3.479 -1.072 -0.182 C12 XYX 19 XYX C13 C14 C 0 1 Y N N N N N -29.209 4.015 -2.282 -4.806 -0.429 -0.028 C13 XYX 20 XYX C14 C15 C 0 1 Y N N N N N -30.382 4.264 -2.986 -5.966 -1.149 -0.313 C14 XYX 21 XYX C15 C16 C 0 1 Y N N N N N -30.351 4.664 -4.310 -7.194 -0.556 -0.171 C15 XYX 22 XYX C16 C17 C 0 1 Y N N N N N -29.139 4.826 -4.974 -7.283 0.773 0.259 C16 XYX 23 XYX C17 C18 C 0 1 N N N N N N -29.126 5.164 -6.423 -8.599 1.411 0.412 C17 XYX 24 XYX C18 C19 C 0 1 N N N N N N -30.371 5.694 -7.058 -8.693 2.842 0.876 C18 XYX 25 XYX C19 C20 C 0 1 Y N N N N N -27.961 4.611 -4.267 -6.117 1.494 0.545 C19 XYX 26 XYX C20 C21 C 0 1 Y N N N N N -27.994 4.210 -2.943 -4.892 0.895 0.407 C20 XYX 27 XYX C21 C22 C 0 1 Y N N N N N -30.300 3.798 -0.036 -3.389 -2.396 -0.611 C21 XYX 28 XYX C22 C23 C 0 1 Y N N N N N -30.384 3.208 1.216 -2.153 -2.993 -0.754 C22 XYX 29 XYX C23 C24 C 0 1 Y N N N N N -29.421 2.306 1.628 -1.001 -2.282 -0.478 C23 XYX 30 XYX O2 O5 O 0 1 N N N N N N -27.775 -0.414 6.999 5.375 -1.895 0.449 O2 XYX 31 XYX H1 H1 H 0 1 N N N N N N -30.301 -3.855 3.163 7.900 2.942 -0.375 H1 XYX 32 XYX H2 H2 H 0 1 N N N N N N -29.006 -3.068 1.208 6.298 3.563 -2.142 H2 XYX 33 XYX H3 H3 H 0 1 N N N N N N -27.061 -1.597 1.533 4.295 2.187 -2.529 H3 XYX 34 XYX H4 H4 H 0 1 N N N N N N -26.436 -2.299 7.865 4.890 -1.146 2.779 H4 XYX 35 XYX H5 H5 H 0 1 N N N N N N -25.583 -0.477 1.756 2.762 0.259 0.771 H5 XYX 36 XYX H6 H6 H 0 1 N N N N N N -24.658 0.640 2.816 2.187 1.434 -0.436 H6 XYX 37 XYX H7 H7 H 0 1 N N N N N N -30.729 -2.738 5.915 8.607 0.548 1.145 H7 XYX 38 XYX H8 H8 H 0 1 N N N N N N -29.773 -4.257 5.994 7.362 1.115 2.293 H8 XYX 39 XYX H9 H9 H 0 1 N N N N N N -25.115 -1.378 4.055 3.778 -1.100 -1.036 H9 XYX 40 XYX H10 H10 H 0 1 N N N N N N -26.127 -0.057 4.732 3.203 0.075 -2.243 H10 XYX 41 XYX H11 H11 H 0 1 N N N N N N -27.106 0.356 0.654 0.098 0.398 0.962 H11 XYX 42 XYX H12 H12 H 0 1 N N N N N N -27.439 2.356 -1.108 -2.382 0.669 0.435 H12 XYX 43 XYX H13 H13 H 0 1 N N N N N N -31.334 4.143 -2.491 -5.897 -2.174 -0.645 H13 XYX 44 XYX H14 H14 H 0 1 N N N N N N -31.277 4.852 -4.833 -8.092 -1.114 -0.392 H14 XYX 45 XYX H15 H15 H 0 1 N N N N N N -30.189 5.877 -8.127 -9.741 3.138 0.929 H15 XYX 46 XYX H16 H16 H 0 1 N N N N N N -31.182 4.959 -6.945 -8.239 2.935 1.863 H16 XYX 47 XYX H17 H17 H 0 1 N N N N N N -30.659 6.636 -6.569 -8.168 3.487 0.172 H17 XYX 48 XYX H18 H18 H 0 1 N N N N N N -27.010 4.759 -4.757 -6.183 2.519 0.877 H18 XYX 49 XYX H19 H19 H 0 1 N N N N N N -27.067 4.045 -2.413 -3.992 1.450 0.627 H19 XYX 50 XYX H20 H20 H 0 1 N N N N N N -31.054 4.506 -0.347 -4.287 -2.954 -0.831 H20 XYX 51 XYX H21 H21 H 0 1 N N N N N N -31.206 3.454 1.872 -2.086 -4.019 -1.087 H21 XYX 52 XYX H22 H22 H 0 1 N N N N N N -29.498 1.838 2.598 -0.036 -2.752 -0.595 H22 XYX 53 XYX H23 H23 H 0 1 N N N N N N -27.656 -0.467 7.940 5.396 -2.659 1.042 H23 XYX 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XYX O4 C17 DOUB N N 1 XYX C18 C17 SING N N 2 XYX C17 C16 SING N N 3 XYX C16 C15 DOUB Y N 4 XYX C16 C19 SING Y N 5 XYX C15 C14 SING Y N 6 XYX C19 C20 DOUB Y N 7 XYX C14 C13 DOUB Y N 8 XYX C20 C13 SING Y N 9 XYX C13 C12 SING N N 10 XYX C12 C11 DOUB Y N 11 XYX C12 C21 SING Y N 12 XYX C11 C10 SING Y N 13 XYX C21 C22 DOUB Y N 14 XYX C10 N SING N N 15 XYX C10 C23 DOUB Y N 16 XYX C22 C23 SING Y N 17 XYX N C SING N N 18 XYX C8 C9 DOUB Y N 19 XYX C8 C7 SING Y N 20 XYX C9 C3 SING Y N 21 XYX C C1 SING N N 22 XYX C O DOUB N N 23 XYX C1 C2 SING N N 24 XYX C7 C6 DOUB Y N 25 XYX C3 C2 SING N N 26 XYX C3 C4 DOUB Y N 27 XYX C6 C4 SING Y N 28 XYX C6 C5 SING N N 29 XYX C4 B SING N N 30 XYX C5 O3 SING N N 31 XYX B O3 SING N N 32 XYX B O1 SING N N 33 XYX B O2 SING N N 34 XYX C7 H1 SING N N 35 XYX C8 H2 SING N N 36 XYX C9 H3 SING N N 37 XYX O1 H4 SING N N 38 XYX C1 H5 SING N N 39 XYX C1 H6 SING N N 40 XYX C5 H7 SING N N 41 XYX C5 H8 SING N N 42 XYX C2 H9 SING N N 43 XYX C2 H10 SING N N 44 XYX N H11 SING N N 45 XYX C11 H12 SING N N 46 XYX C14 H13 SING N N 47 XYX C15 H14 SING N N 48 XYX C18 H15 SING N N 49 XYX C18 H16 SING N N 50 XYX C18 H17 SING N N 51 XYX C19 H18 SING N N 52 XYX C20 H19 SING N N 53 XYX C21 H20 SING N N 54 XYX C22 H21 SING N N 55 XYX C23 H22 SING N N 56 XYX O2 H23 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XYX InChI InChI 1.06 "InChI=1S/C24H23BNO5/c1-16(27)17-8-10-18(11-9-17)20-5-3-7-22(14-20)26-23(28)13-12-19-4-2-6-21-15-31-25(29,30)24(19)21/h2-11,14,29-30H,12-13,15H2,1H3,(H,26,28)/q-1" XYX InChIKey InChI 1.06 OUDDKMXJHGOSNX-UHFFFAOYSA-N XYX SMILES_CANONICAL CACTVS 3.385 "CC(=O)c1ccc(cc1)c2cccc(NC(=O)CCc3cccc4CO[B-](O)(O)c34)c2" XYX SMILES CACTVS 3.385 "CC(=O)c1ccc(cc1)c2cccc(NC(=O)CCc3cccc4CO[B-](O)(O)c34)c2" XYX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[B-]1(c2c(cccc2CCC(=O)Nc3cccc(c3)c4ccc(cc4)C(=O)C)CO1)(O)O" XYX SMILES "OpenEye OEToolkits" 2.0.7 "[B-]1(c2c(cccc2CCC(=O)Nc3cccc(c3)c4ccc(cc4)C(=O)C)CO1)(O)O" # _pdbx_chem_comp_identifier.comp_id XYX _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "3-[7,7-bis(oxidanyl)-8-oxa-7-boranuidabicyclo[4.3.0]nona-1,3,5-trien-5-yl]-~{N}-[3-(4-ethanoylphenyl)phenyl]propanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XYX "Create component" 2023-06-09 RCSB XYX "Initial release" 2023-11-08 RCSB #