data_XZG # _chem_comp.id XZG _chem_comp.name "(5R)-1-ethyl-5-(4-methylphenyl)-7-({1-[(4-nitrophenyl)methyl]piperidin-4-yl}methyl)-5,7,8,9-tetrahydro-1H-pyrrolo[3',4':5,6]pyrido[2,3-d]pyrimidine-2,4,6(3H)-trione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H34 N6 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-01-22 _chem_comp.pdbx_modified_date 2022-07-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 570.639 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XZG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7LH8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XZG C13 C1 C 0 1 N N N -21.209 5.910 -1.930 3.170 1.701 1.418 C13 XZG 1 XZG C17 C2 C 0 1 Y N N -23.015 4.580 1.617 6.137 -0.407 -0.774 C17 XZG 2 XZG C20 C3 C 0 1 Y N N -24.581 2.283 2.033 8.799 0.047 -0.180 C20 XZG 3 XZG C24 C4 C 0 1 Y N N -25.166 3.433 1.503 8.064 1.012 -0.845 C24 XZG 4 XZG C26 C5 C 0 1 N N N -20.080 6.220 0.399 2.457 -0.625 -0.154 C26 XZG 5 XZG C28 C6 C 0 1 N N N -17.503 6.688 -4.976 -1.449 2.399 0.691 C28 XZG 6 XZG C01 C7 C 0 1 N N N -13.414 10.182 -7.603 -6.910 2.343 2.329 C01 XZG 7 XZG C02 C8 C 0 1 N N N -14.855 10.722 -7.584 -6.594 2.829 0.914 C02 XZG 8 XZG C04 C9 C 0 1 N N N -15.948 10.399 -5.408 -4.988 1.236 -0.049 C04 XZG 9 XZG C06 C10 C 0 1 N N N -17.012 8.163 -4.944 -2.698 1.652 0.326 C06 XZG 10 XZG C07 C11 C 0 1 N N N -17.646 8.789 -3.792 -2.319 0.600 -0.440 C07 XZG 11 XZG C08 C12 C 0 1 N N N -18.497 7.818 -3.077 -0.923 0.607 -0.605 C08 XZG 12 XZG C11 C13 C 0 1 N N N -19.175 5.343 -3.340 1.068 1.969 0.092 C11 XZG 13 XZG C12 C14 C 0 1 N N N -19.882 5.330 -1.930 1.707 1.267 1.292 C12 XZG 14 XZG C14 C15 C 0 1 N N N -21.986 5.273 -0.770 3.935 1.269 0.164 C14 XZG 15 XZG C16 C16 C 0 1 N N N -22.088 5.792 1.383 4.686 -0.655 -1.098 C16 XZG 16 XZG C18 C17 C 0 1 Y N N -22.454 3.432 2.153 6.874 -1.376 -0.119 C18 XZG 17 XZG C19 C18 C 0 1 Y N N -23.232 2.302 2.357 8.205 -1.148 0.179 C19 XZG 18 XZG C25 C19 C 0 1 Y N N -24.381 4.575 1.294 6.732 0.786 -1.137 C25 XZG 19 XZG C27 C20 C 0 1 N N N -19.146 5.836 -0.780 1.648 -0.249 1.089 C27 XZG 20 XZG C29 C21 C 0 1 N N R -17.212 10.090 -3.186 -3.315 -0.389 -0.995 C29 XZG 21 XZG C30 C22 C 0 1 Y N N -16.367 9.652 -2.001 -3.203 -1.690 -0.244 C30 XZG 22 XZG C31 C23 C 0 1 Y N N -15.471 8.597 -2.140 -3.430 -1.724 1.119 C31 XZG 23 XZG C32 C24 C 0 1 Y N N -14.725 8.179 -1.040 -3.326 -2.918 1.808 C32 XZG 24 XZG C33 C25 C 0 1 Y N N -14.870 8.806 0.193 -2.996 -4.079 1.133 C33 XZG 25 XZG C34 C26 C 0 1 N N N -14.049 8.337 1.386 -2.883 -5.380 1.884 C34 XZG 26 XZG C35 C27 C 0 1 Y N N -15.766 9.859 0.336 -2.770 -4.045 -0.230 C35 XZG 27 XZG C36 C28 C 0 1 Y N N -16.525 10.264 -0.759 -2.878 -2.852 -0.919 C36 XZG 28 XZG C37 C29 C 0 1 N N N -16.466 10.938 -4.241 -4.710 0.163 -0.838 C37 XZG 29 XZG C38 C30 C 0 1 N N N -16.211 12.282 -3.927 -5.765 -0.461 -1.533 C38 XZG 30 XZG C41 C31 C 0 1 N N N -15.118 12.540 -5.987 -7.277 1.064 -0.613 C41 XZG 31 XZG N03 N1 N 0 1 N N N -15.318 11.237 -6.294 -6.287 1.679 0.059 N03 XZG 32 XZG N05 N2 N 0 1 N N N -16.151 8.981 -5.793 -4.002 1.906 0.648 N05 XZG 33 XZG N10 N3 N 0 1 N N N -18.422 6.540 -3.790 -0.361 1.647 0.042 N10 XZG 34 XZG N15 N4 N 0 1 N N N -21.316 5.444 0.504 3.849 -0.190 0.016 N15 XZG 35 XZG N21 N5 N 1 1 N N N -25.312 1.051 2.308 10.224 0.291 0.138 N21 XZG 36 XZG N40 N6 N 0 1 N N N -15.551 13.033 -4.814 -7.021 0.006 -1.402 N40 XZG 37 XZG O09 O1 O 0 1 N N N -19.098 8.109 -2.097 -0.303 -0.219 -1.248 O09 XZG 38 XZG O22 O2 O -1 1 N N N -26.375 0.800 1.825 10.747 1.345 -0.178 O22 XZG 39 XZG O23 O3 O 0 1 N N N -24.817 0.269 3.050 10.873 -0.562 0.715 O23 XZG 40 XZG O39 O4 O 0 1 N N N -16.598 12.748 -2.883 -5.541 -1.421 -2.250 O39 XZG 41 XZG O42 O5 O 0 1 N N N -14.530 13.273 -6.733 -8.418 1.471 -0.505 O42 XZG 42 XZG H1 H1 H 0 1 N N N -21.144 6.999 -1.786 3.221 2.785 1.519 H1 XZG 43 XZG H2 H2 H 0 1 N N N -21.714 5.695 -2.884 3.615 1.232 2.295 H2 XZG 44 XZG H3 H3 H 0 1 N N N -26.217 3.443 1.255 8.530 1.942 -1.132 H3 XZG 45 XZG H4 H4 H 0 1 N N N -19.517 6.087 1.334 2.429 -1.706 -0.293 H4 XZG 46 XZG H5 H5 H 0 1 N N N -20.354 7.279 0.283 2.028 -0.135 -1.028 H5 XZG 47 XZG H6 H6 H 0 1 N N N -18.046 6.485 -5.910 -1.488 3.418 0.305 H6 XZG 48 XZG H7 H7 H 0 1 N N N -16.651 5.998 -4.890 -1.313 2.407 1.772 H7 XZG 49 XZG H8 H8 H 0 1 N N N -13.170 9.823 -8.614 -6.047 1.811 2.732 H8 XZG 50 XZG H9 H9 H 0 1 N N N -12.718 10.986 -7.322 -7.138 3.198 2.965 H9 XZG 51 XZG H10 H10 H 0 1 N N N -13.324 9.352 -6.887 -7.769 1.672 2.300 H10 XZG 52 XZG H11 H11 H 0 1 N N N -14.921 11.538 -8.318 -7.457 3.361 0.511 H11 XZG 53 XZG H12 H12 H 0 1 N N N -15.527 9.905 -7.884 -5.735 3.499 0.943 H12 XZG 54 XZG H13 H13 H 0 1 N N N -19.961 5.164 -4.089 1.194 3.047 0.191 H13 XZG 55 XZG H14 H14 H 0 1 N N N -18.465 4.503 -3.345 1.548 1.630 -0.826 H14 XZG 56 XZG H15 H15 H 0 1 N N N -20.036 4.261 -1.722 1.168 1.536 2.200 H15 XZG 57 XZG H16 H16 H 0 1 N N N -22.980 5.740 -0.712 3.499 1.750 -0.711 H16 XZG 58 XZG H17 H17 H 0 1 N N N -22.098 4.197 -0.969 4.981 1.564 0.257 H17 XZG 59 XZG H18 H18 H 0 1 N N N -21.538 6.039 2.303 4.419 -0.113 -2.005 H18 XZG 60 XZG H19 H19 H 0 1 N N N -22.672 6.666 1.059 4.526 -1.722 -1.252 H19 XZG 61 XZG H20 H20 H 0 1 N N N -21.406 3.417 2.413 6.411 -2.310 0.161 H20 XZG 62 XZG H21 H21 H 0 1 N N N -22.778 1.417 2.777 8.781 -1.905 0.691 H21 XZG 63 XZG H22 H22 H 0 1 N N N -24.833 5.463 0.879 6.158 1.540 -1.656 H22 XZG 64 XZG H23 H23 H 0 1 N N N -18.447 5.058 -0.438 0.612 -0.558 0.956 H23 XZG 65 XZG H24 H24 H 0 1 N N N -18.580 6.728 -1.087 2.069 -0.749 1.962 H24 XZG 66 XZG H25 H25 H 0 1 N N N -15.354 8.105 -3.094 -3.687 -0.817 1.646 H25 XZG 67 XZG H26 H26 H 0 1 N N N -14.028 7.361 -1.146 -3.503 -2.944 2.873 H26 XZG 68 XZG H27 H27 H 0 1 N N N -13.102 8.895 1.422 -3.853 -5.879 1.895 H27 XZG 69 XZG H28 H28 H 0 1 N N N -14.614 8.515 2.313 -2.151 -6.021 1.393 H28 XZG 70 XZG H29 H29 H 0 1 N N N -13.838 7.262 1.286 -2.565 -5.183 2.908 H29 XZG 71 XZG H30 H30 H 0 1 N N N -15.873 10.358 1.288 -2.513 -4.952 -0.757 H30 XZG 72 XZG H31 H31 H 0 1 N N N -17.244 11.061 -0.644 -2.705 -2.826 -1.985 H31 XZG 73 XZG H33 H33 H 0 1 N N N -15.374 13.993 -4.598 -7.746 -0.424 -1.881 H33 XZG 74 XZG H34 H34 H 0 1 N N N -18.090 10.647 -2.827 -3.108 -0.559 -2.051 H34 XZG 75 XZG H35 H35 H 0 1 N N N -15.713 8.598 -6.606 -4.228 2.539 1.348 H35 XZG 76 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XZG C01 C02 SING N N 1 XZG C02 N03 SING N N 2 XZG O42 C41 DOUB N N 3 XZG N03 C41 SING N N 4 XZG N03 C04 SING N N 5 XZG C41 N40 SING N N 6 XZG N05 C04 SING N N 7 XZG N05 C06 SING N N 8 XZG C04 C37 DOUB N N 9 XZG C28 C06 SING N N 10 XZG C28 N10 SING N N 11 XZG C06 C07 DOUB N N 12 XZG N40 C38 SING N N 13 XZG C37 C38 SING N N 14 XZG C37 C29 SING N N 15 XZG C38 O39 DOUB N N 16 XZG C07 C29 SING N N 17 XZG C07 C08 SING N N 18 XZG N10 C11 SING N N 19 XZG N10 C08 SING N N 20 XZG C11 C12 SING N N 21 XZG C29 C30 SING N N 22 XZG C08 O09 DOUB N N 23 XZG C31 C30 DOUB Y N 24 XZG C31 C32 SING Y N 25 XZG C30 C36 SING Y N 26 XZG C12 C13 SING N N 27 XZG C12 C27 SING N N 28 XZG C13 C14 SING N N 29 XZG C32 C33 DOUB Y N 30 XZG C27 C26 SING N N 31 XZG C14 N15 SING N N 32 XZG C36 C35 DOUB Y N 33 XZG C33 C35 SING Y N 34 XZG C33 C34 SING N N 35 XZG C26 N15 SING N N 36 XZG N15 C16 SING N N 37 XZG C25 C24 DOUB Y N 38 XZG C25 C17 SING Y N 39 XZG C16 C17 SING N N 40 XZG C24 C20 SING Y N 41 XZG C17 C18 DOUB Y N 42 XZG O22 N21 SING N N 43 XZG C20 N21 SING N N 44 XZG C20 C19 DOUB Y N 45 XZG C18 C19 SING Y N 46 XZG N21 O23 DOUB N N 47 XZG C13 H1 SING N N 48 XZG C13 H2 SING N N 49 XZG C24 H3 SING N N 50 XZG C26 H4 SING N N 51 XZG C26 H5 SING N N 52 XZG C28 H6 SING N N 53 XZG C28 H7 SING N N 54 XZG C01 H8 SING N N 55 XZG C01 H9 SING N N 56 XZG C01 H10 SING N N 57 XZG C02 H11 SING N N 58 XZG C02 H12 SING N N 59 XZG C11 H13 SING N N 60 XZG C11 H14 SING N N 61 XZG C12 H15 SING N N 62 XZG C14 H16 SING N N 63 XZG C14 H17 SING N N 64 XZG C16 H18 SING N N 65 XZG C16 H19 SING N N 66 XZG C18 H20 SING N N 67 XZG C19 H21 SING N N 68 XZG C25 H22 SING N N 69 XZG C27 H23 SING N N 70 XZG C27 H24 SING N N 71 XZG C31 H25 SING N N 72 XZG C32 H26 SING N N 73 XZG C34 H27 SING N N 74 XZG C34 H28 SING N N 75 XZG C34 H29 SING N N 76 XZG C35 H30 SING N N 77 XZG C36 H31 SING N N 78 XZG N40 H33 SING N N 79 XZG C29 H34 SING N N 80 XZG N05 H35 SING N N 81 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XZG SMILES ACDLabs 12.01 "C1CN(CCC1CN5CC4=C(C(c2ccc(cc2)C)C3=C(N(CC)C(NC3=O)=O)N4)C5=O)Cc6ccc([N+](=O)[O-])cc6" XZG InChI InChI 1.03 "InChI=1S/C31H34N6O5/c1-3-36-28-27(29(38)33-31(36)40)25(22-8-4-19(2)5-9-22)26-24(32-28)18-35(30(26)39)17-21-12-14-34(15-13-21)16-20-6-10-23(11-7-20)37(41)42/h4-11,21,25,32H,3,12-18H2,1-2H3,(H,33,38,40)/t25-/m1/s1" XZG InChIKey InChI 1.03 NSZRAHFWJGEQDI-RUZDIDTESA-N XZG SMILES_CANONICAL CACTVS 3.385 "CCN1C(=O)NC(=O)C2=C1NC3=C([C@H]2c4ccc(C)cc4)C(=O)N(CC5CCN(CC5)Cc6ccc(cc6)[N+]([O-])=O)C3" XZG SMILES CACTVS 3.385 "CCN1C(=O)NC(=O)C2=C1NC3=C([CH]2c4ccc(C)cc4)C(=O)N(CC5CCN(CC5)Cc6ccc(cc6)[N+]([O-])=O)C3" XZG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCN1C2=C([C@@H](C3=C(N2)CN(C3=O)CC4CCN(CC4)Cc5ccc(cc5)[N+](=O)[O-])c6ccc(cc6)C)C(=O)NC1=O" XZG SMILES "OpenEye OEToolkits" 2.0.7 "CCN1C2=C(C(C3=C(N2)CN(C3=O)CC4CCN(CC4)Cc5ccc(cc5)[N+](=O)[O-])c6ccc(cc6)C)C(=O)NC1=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XZG "SYSTEMATIC NAME" ACDLabs 12.01 "(5R)-1-ethyl-5-(4-methylphenyl)-7-({1-[(4-nitrophenyl)methyl]piperidin-4-yl}methyl)-5,7,8,9-tetrahydro-1H-pyrrolo[3',4':5,6]pyrido[2,3-d]pyrimidine-2,4,6(3H)-trione" XZG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(8~{R})-13-ethyl-8-(4-methylphenyl)-5-[[1-[(4-nitrophenyl)methyl]piperidin-4-yl]methyl]-2,5,11,13-tetrazatricyclo[7.4.0.0^{3,7}]trideca-1(9),3(7)-diene-6,10,12-trione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XZG "Create component" 2021-01-22 RCSB XZG "Initial release" 2022-07-06 RCSB #