data_XZL # _chem_comp.id XZL _chem_comp.name "7-[(1~{S})-1-[4-(aminomethyl)phenoxy]ethyl]-3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H25 F N2 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-09 _chem_comp.pdbx_modified_date 2024-06-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 496.551 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XZL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PAN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XZL C01 C1 C 0 1 N N N N N N -22.251 -11.733 15.311 4.045 -0.687 -2.317 C01 XZL 1 XZL C02 C2 C 0 1 N N S N N N -23.464 -12.225 14.467 3.833 -0.669 -0.802 C02 XZL 2 XZL C04 C3 C 0 1 Y N N N N N -25.628 -13.000 15.112 6.037 -0.668 0.090 C04 XZL 3 XZL C05 C4 C 0 1 Y N N N N N -26.305 -12.180 14.213 6.161 0.638 -0.362 C05 XZL 4 XZL C06 C5 C 0 1 Y N N N N N -27.672 -12.323 14.049 7.316 1.351 -0.102 C06 XZL 5 XZL C07 C6 C 0 1 Y N N N N N -28.361 -13.272 14.776 8.347 0.764 0.609 C07 XZL 6 XZL C08 C7 C 0 1 N N N N N N -29.875 -13.413 14.583 9.605 1.544 0.891 C08 XZL 7 XZL C10 C8 C 0 1 Y N N N N N -27.699 -14.088 15.672 8.225 -0.537 1.061 C10 XZL 8 XZL C11 C9 C 0 1 Y N N N N N -26.333 -13.948 15.834 7.071 -1.252 0.808 C11 XZL 9 XZL C12 C10 C 0 1 Y N N N N N -22.877 -12.977 13.258 2.524 -1.339 -0.470 C12 XZL 10 XZL C13 C11 C 0 1 Y N N N N N -22.636 -12.266 12.061 1.337 -0.611 -0.515 C13 XZL 11 XZL C15 C12 C 0 1 Y N N N N N -22.493 -10.718 10.517 -0.301 0.931 -0.714 C15 XZL 12 XZL C16 C13 C 0 1 N N N N N N -22.693 -9.378 9.889 -0.968 2.212 -0.962 C16 XZL 13 XZL C19 C14 C 0 1 Y N N N N N -22.005 -11.880 9.938 -0.930 -0.243 -0.340 C19 XZL 14 XZL C20 C15 C 0 1 Y N N N N N -21.420 -12.047 8.546 -2.379 -0.440 -0.119 C20 XZL 15 XZL C21 C16 C 0 1 Y N N N N N -20.456 -11.125 8.134 -3.274 -0.312 -1.182 C21 XZL 16 XZL C22 C17 C 0 1 Y N N N N N -19.847 -11.225 6.889 -4.626 -0.498 -0.969 C22 XZL 17 XZL C24 C18 C 0 1 Y N N N N N -20.196 -12.271 6.044 -5.093 -0.811 0.298 C24 XZL 18 XZL C25 C19 C 0 1 N N N N N N -19.551 -12.430 4.669 -6.570 -1.006 0.526 C25 XZL 19 XZL C27 C20 C 0 1 N N N N N N -20.754 -9.888 3.854 -9.069 0.117 1.184 C27 XZL 20 XZL C30 C21 C 0 1 Y N N N N N -21.136 -13.191 6.481 -4.210 -0.938 1.354 C30 XZL 21 XZL C31 C22 C 0 1 Y N N N N N -21.741 -13.093 7.720 -2.857 -0.761 1.153 C31 XZL 22 XZL C32 C23 C 0 1 Y N N N N N -22.079 -12.869 10.942 0.125 -1.255 -0.207 C32 XZL 23 XZL C33 C24 C 0 1 Y N N N N N -21.720 -14.236 10.999 0.123 -2.609 0.138 C33 XZL 24 XZL C34 C25 C 0 1 Y N N N N N -21.960 -14.938 12.174 1.299 -3.302 0.175 C34 XZL 25 XZL C35 C26 C 0 1 Y N N N N N -22.517 -14.320 13.309 2.498 -2.672 -0.127 C35 XZL 26 XZL F23 F1 F 0 1 N N N N N N -18.922 -10.276 6.535 -5.494 -0.374 -1.997 F23 XZL 27 XZL N09 N1 N 0 1 N N N N N N -30.528 -13.863 15.794 9.461 2.260 2.165 N09 XZL 28 XZL N14 N2 N 0 1 Y N N N N N -22.861 -10.971 11.762 1.056 0.701 -0.816 N14 XZL 29 XZL O03 O1 O 0 1 N N N N N N -24.239 -12.958 15.346 4.902 -1.371 -0.164 O03 XZL 30 XZL O17 O2 O 0 1 N N N N N N -23.167 -9.390 8.707 -2.175 2.302 -0.842 O17 XZL 31 XZL O18 O3 O 0 1 N N N N N N -22.515 -8.320 10.548 -0.243 3.291 -1.323 O18 XZL 32 XZL O28 O4 O 0 1 N N N N N N -21.744 -12.311 3.085 -6.810 1.007 2.212 O28 XZL 33 XZL O29 O5 O 0 1 N N N N N N -19.782 -11.583 2.067 -7.236 1.451 -0.161 O29 XZL 34 XZL S26 S1 S 0 1 N N N N N N -20.487 -11.603 3.347 -7.331 0.582 0.960 S26 XZL 35 XZL H013 H1 H 0 0 N N N N N N -22.615 -11.186 16.193 3.230 -0.152 -2.804 H013 XZL 36 XZL H011 H2 H 0 0 N N N N N N -21.656 -12.599 15.637 4.992 -0.203 -2.557 H011 XZL 37 XZL H012 H3 H 0 0 N N N N N N -21.625 -11.067 14.699 4.064 -1.718 -2.670 H012 XZL 38 XZL H021 H4 H 0 0 N N N N N N -24.013 -11.345 14.101 3.814 0.362 -0.449 H021 XZL 39 XZL H051 H5 H 0 0 N N N N N N -25.766 -11.436 13.646 5.357 1.096 -0.918 H051 XZL 40 XZL H061 H6 H 0 0 N N N N N N -28.200 -11.691 13.351 7.413 2.367 -0.454 H061 XZL 41 XZL H082 H7 H 0 0 N N N N N N -30.291 -12.436 14.296 10.451 0.860 0.952 H082 XZL 42 XZL H081 H8 H 0 0 N N N N N N -30.066 -14.143 13.782 9.775 2.262 0.088 H081 XZL 43 XZL H101 H9 H 0 0 N N N N N N -28.243 -14.828 16.240 9.031 -0.992 1.616 H101 XZL 44 XZL H111 H10 H 0 0 N N N N N N -25.810 -14.585 16.532 6.975 -2.267 1.165 H111 XZL 45 XZL H211 H11 H 0 0 N N N N N N -20.178 -10.318 8.796 -2.910 -0.068 -2.169 H211 XZL 46 XZL H252 H12 H 0 0 N N N N N N -19.485 -13.503 4.434 -7.030 -1.393 -0.384 H252 XZL 47 XZL H251 H13 H 0 0 N N N N N N -18.539 -12.000 4.704 -6.721 -1.716 1.339 H251 XZL 48 XZL H272 H14 H 0 0 N N N N N N -21.284 -9.868 4.817 -9.650 0.999 1.453 H272 XZL 49 XZL H271 H15 H 0 0 N N N N N N -19.783 -9.382 3.960 -9.456 -0.303 0.255 H271 XZL 50 XZL H273 H16 H 0 0 N N N N N N -21.357 -9.370 3.093 -9.147 -0.626 1.978 H273 XZL 51 XZL H301 H17 H 0 0 N N N N N N -21.405 -14.011 5.832 -4.581 -1.182 2.339 H301 XZL 52 XZL H311 H18 H 0 0 N N N N N N -22.461 -13.834 8.035 -2.169 -0.861 1.979 H311 XZL 53 XZL H331 H19 H 0 0 N N N N N N -21.269 -14.724 10.147 -0.807 -3.106 0.375 H331 XZL 54 XZL H341 H20 H 0 0 N N N N N N -21.712 -15.988 12.217 1.296 -4.349 0.442 H341 XZL 55 XZL H351 H21 H 0 0 N N N N N N -22.665 -14.886 14.217 3.420 -3.234 -0.099 H351 XZL 56 XZL H092 H22 H 0 0 N N N N N N -31.512 -13.944 15.633 10.292 2.791 2.378 H092 XZL 57 XZL H091 H23 H 0 0 N N N N N N -30.160 -14.754 16.060 8.645 2.854 2.157 H091 XZL 58 XZL H141 H25 H 0 0 N N N N N N -23.250 -10.298 12.391 1.715 1.368 -1.064 H141 XZL 59 XZL H2 H26 H 0 1 N N N N N N -22.786 -7.573 10.027 -0.770 4.089 -1.464 H2 XZL 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XZL O29 S26 DOUB N N 1 XZL O28 S26 DOUB N N 2 XZL S26 C27 SING N N 3 XZL S26 C25 SING N N 4 XZL C25 C24 SING N N 5 XZL C24 C30 DOUB Y N 6 XZL C24 C22 SING Y N 7 XZL C30 C31 SING Y N 8 XZL F23 C22 SING N N 9 XZL C22 C21 DOUB Y N 10 XZL C31 C20 DOUB Y N 11 XZL C21 C20 SING Y N 12 XZL C20 C19 SING N N 13 XZL O17 C16 DOUB N N 14 XZL C16 C15 SING N N 15 XZL C16 O18 SING N N 16 XZL C19 C15 DOUB Y N 17 XZL C19 C32 SING Y N 18 XZL C15 N14 SING Y N 19 XZL C32 C33 DOUB Y N 20 XZL C32 C13 SING Y N 21 XZL C33 C34 SING Y N 22 XZL N14 C13 SING Y N 23 XZL C13 C12 DOUB Y N 24 XZL C34 C35 DOUB Y N 25 XZL C12 C35 SING Y N 26 XZL C12 C02 SING N N 27 XZL C06 C05 DOUB Y N 28 XZL C06 C07 SING Y N 29 XZL C05 C04 SING Y N 30 XZL C02 C01 SING N N 31 XZL C02 O03 SING N N 32 XZL C08 C07 SING N N 33 XZL C08 N09 SING N N 34 XZL C07 C10 DOUB Y N 35 XZL C04 O03 SING N N 36 XZL C04 C11 DOUB Y N 37 XZL C10 C11 SING Y N 38 XZL C01 H013 SING N N 39 XZL C01 H011 SING N N 40 XZL C01 H012 SING N N 41 XZL C02 H021 SING N N 42 XZL C05 H051 SING N N 43 XZL C06 H061 SING N N 44 XZL C08 H082 SING N N 45 XZL C08 H081 SING N N 46 XZL C10 H101 SING N N 47 XZL C11 H111 SING N N 48 XZL C21 H211 SING N N 49 XZL C25 H252 SING N N 50 XZL C25 H251 SING N N 51 XZL C27 H272 SING N N 52 XZL C27 H271 SING N N 53 XZL C27 H273 SING N N 54 XZL C30 H301 SING N N 55 XZL C31 H311 SING N N 56 XZL C33 H331 SING N N 57 XZL C34 H341 SING N N 58 XZL C35 H351 SING N N 59 XZL N09 H092 SING N N 60 XZL N09 H091 SING N N 61 XZL N14 H141 SING N N 62 XZL O18 H2 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XZL InChI InChI 1.06 "InChI=1S/C26H25FN2O5S/c1-15(34-19-10-6-16(13-28)7-11-19)20-4-3-5-21-23(25(26(30)31)29-24(20)21)17-8-9-18(22(27)12-17)14-35(2,32)33/h3-12,15,29H,13-14,28H2,1-2H3,(H,30,31)/t15-/m0/s1" XZL InChIKey InChI 1.06 IPGZSJQIGXYHKU-HNNXBMFYSA-N XZL SMILES_CANONICAL CACTVS 3.385 "C[C@H](Oc1ccc(CN)cc1)c2cccc3c2[nH]c(C(O)=O)c3c4ccc(C[S](C)(=O)=O)c(F)c4" XZL SMILES CACTVS 3.385 "C[CH](Oc1ccc(CN)cc1)c2cccc3c2[nH]c(C(O)=O)c3c4ccc(C[S](C)(=O)=O)c(F)c4" XZL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](c1cccc2c1[nH]c(c2c3ccc(c(c3)F)CS(=O)(=O)C)C(=O)O)Oc4ccc(cc4)CN" XZL SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1cccc2c1[nH]c(c2c3ccc(c(c3)F)CS(=O)(=O)C)C(=O)O)Oc4ccc(cc4)CN" # _pdbx_chem_comp_identifier.comp_id XZL _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "7-[(1~{S})-1-[4-(aminomethyl)phenoxy]ethyl]-3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XZL "Create component" 2023-06-09 PDBE XZL "Initial release" 2024-06-26 RCSB #