data_XZR # _chem_comp.id XZR _chem_comp.name "7-[(1~{R})-1-[[4-(aminomethyl)phenyl]methoxy]ethyl]-3-[3-chloranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H27 Cl N2 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-09 _chem_comp.pdbx_modified_date 2024-06-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 527.032 _chem_comp.one_letter_code ? _chem_comp.three_letter_code XZR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PAM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal XZR C25 C1 C 0 1 Y N N N N N -21.920 -15.010 12.197 -1.185 1.484 1.164 C25 XZR 1 XZR C24 C2 C 0 1 Y N N N N N -21.698 -14.271 11.048 0.033 0.975 0.813 C24 XZR 2 XZR C26 C3 C 0 1 Y N N N N N -22.506 -14.417 13.313 -2.325 0.694 1.096 C26 XZR 3 XZR C23 C4 C 0 1 Y N N N N N -22.083 -12.920 11.020 0.134 -0.350 0.383 C23 XZR 4 XZR C22 C5 C 0 1 Y N N N N N -21.867 -13.130 7.783 3.307 -0.741 -1.397 C22 XZR 5 XZR C21 C6 C 0 1 Y N N N N N -21.339 -13.242 6.495 4.631 -0.360 -1.483 C21 XZR 6 XZR C28 C7 C 0 1 N N N N N N -25.586 -11.960 13.659 -5.714 -1.214 -0.274 C28 XZR 7 XZR C18 C8 C 0 1 N N N N N N -20.778 -9.802 3.683 8.668 2.457 -0.761 C18 XZR 8 XZR C16 C9 C 0 1 N N N N N N -19.839 -12.449 4.616 6.778 0.392 -0.441 C16 XZR 9 XZR C15 C10 C 0 1 Y N N N N N -20.410 -12.321 6.038 5.333 -0.023 -0.340 C15 XZR 10 XZR C11 C11 C 0 1 Y N N N N N -21.445 -12.104 8.614 2.677 -0.787 -0.153 C11 XZR 11 XZR C12 C12 C 0 1 Y N N N N N -20.521 -11.196 8.159 3.391 -0.452 0.998 C12 XZR 12 XZR C13 C13 C 0 1 Y N N N N N -20.001 -11.306 6.888 4.713 -0.067 0.898 C13 XZR 13 XZR C10 C14 C 0 1 Y N N N N N -22.005 -11.935 10.025 1.256 -1.188 -0.056 C10 XZR 14 XZR C01 C15 C 0 1 N N N N N N -22.400 -12.002 15.511 -3.632 -2.270 1.891 C01 XZR 15 XZR C02 C16 C 0 1 N N R N N N -23.500 -12.550 14.595 -3.496 -1.458 0.601 C02 XZR 16 XZR C03 C17 C 0 1 Y N N N N N -22.872 -13.081 13.307 -2.250 -0.613 0.669 C03 XZR 17 XZR C04 C18 C 0 1 Y N N N N N -22.655 -12.324 12.139 -1.018 -1.156 0.312 C04 XZR 18 XZR C06 C19 C 0 1 Y N N N N N -22.549 -10.780 10.584 0.723 -2.428 -0.359 C06 XZR 19 XZR C07 C20 C 0 1 N N N N N N -22.719 -9.422 9.931 1.481 -3.586 -0.840 C07 XZR 20 XZR C29 C21 C 0 1 Y N N N N N -26.511 -12.856 14.477 -6.858 -0.238 -0.375 C29 XZR 21 XZR C30 C22 C 0 1 Y N N N N N -27.475 -13.602 13.814 -7.831 -0.211 0.606 C30 XZR 22 XZR C31 C23 C 0 1 Y N N N N N -28.329 -14.432 14.526 -8.881 0.684 0.514 C31 XZR 23 XZR C32 C24 C 0 1 Y N N N N N -28.201 -14.534 15.908 -8.957 1.552 -0.560 C32 XZR 24 XZR C33 C25 C 0 1 N N N N N N -29.147 -15.452 16.689 -10.101 2.527 -0.660 C33 XZR 25 XZR C35 C26 C 0 1 Y N N N N N -27.233 -13.787 16.561 -7.983 1.525 -1.541 C35 XZR 26 XZR C36 C27 C 0 1 Y N N N N N -26.392 -12.946 15.851 -6.931 0.633 -1.446 C36 XZR 27 XZR N05 N1 N 0 1 Y N N N N N -22.924 -11.049 11.829 -0.639 -2.399 -0.136 N05 XZR 28 XZR N34 N2 N 0 1 N N N N N N -30.427 -14.785 16.839 -9.736 3.781 0.012 N34 XZR 29 XZR O08 O1 O 0 1 N N N N N N -23.117 -9.392 8.726 2.684 -3.501 -1.003 O08 XZR 30 XZR O09 O2 O 0 1 N N N N N N -22.502 -8.362 10.598 0.846 -4.747 -1.103 O09 XZR 31 XZR O19 O3 O 0 1 N N N N N N -22.271 -12.053 3.393 6.386 2.820 0.510 O19 XZR 32 XZR O20 O4 O 0 1 N N N N N N -20.463 -11.895 1.994 6.301 2.520 -1.922 O20 XZR 33 XZR O27 O5 O 0 1 N N N N N N -24.466 -11.562 14.398 -4.637 -0.612 0.448 O27 XZR 34 XZR S17 S1 S 0 1 N N N N N N -20.883 -11.576 3.366 6.876 2.189 -0.666 S17 XZR 35 XZR CL14 CL1 CL 0 0 N N N N N N -18.800 -10.086 6.414 5.602 0.356 2.328 CL14 XZR 36 XZR H251 H1 H 0 0 N N N N N N -21.637 -16.052 12.229 -1.262 2.508 1.500 H251 XZR 37 XZR H241 H2 H 0 0 N N N N N N -21.235 -14.726 10.185 0.915 1.596 0.868 H241 XZR 38 XZR H261 H3 H 0 0 N N N N N N -22.678 -15.010 14.199 -3.281 1.109 1.381 H261 XZR 39 XZR H221 H4 H 0 0 N N N N N N -22.602 -13.841 8.131 2.760 -0.999 -2.292 H221 XZR 40 XZR H211 H5 H 0 0 N N N N N N -21.656 -14.050 5.852 5.120 -0.324 -2.445 H211 XZR 41 XZR H281 H6 H 0 0 N N N N N N -26.143 -11.065 13.345 -6.046 -2.111 0.248 H281 XZR 42 XZR H282 H7 H 0 0 N N N N N N -25.249 -12.513 12.770 -5.375 -1.481 -1.275 H282 XZR 43 XZR H181 H8 H 0 0 N N N N N N -21.098 -9.594 4.715 8.869 3.520 -0.899 H181 XZR 44 XZR H183 H9 H 0 0 N N N N N N -19.740 -9.466 3.546 9.136 2.115 0.162 H183 XZR 45 XZR H182 H10 H 0 0 N N N N N N -21.433 -9.265 2.981 9.074 1.898 -1.604 H182 XZR 46 XZR H161 H11 H 0 0 N N N N N N -19.785 -13.515 4.350 7.302 0.111 0.472 H161 XZR 47 XZR H162 H12 H 0 0 N N N N N N -18.828 -12.015 4.599 7.240 -0.107 -1.293 H162 XZR 48 XZR H121 H13 H 0 0 N N N N N N -20.200 -10.390 8.802 2.908 -0.486 1.963 H121 XZR 49 XZR H012 H14 H 0 0 N N N N N N -22.851 -11.620 16.438 -4.533 -2.882 1.841 H012 XZR 50 XZR H013 H15 H 0 0 N N N N N N -21.690 -12.807 15.753 -2.761 -2.915 2.007 H013 XZR 51 XZR H011 H16 H 0 0 N N N N N N -21.869 -11.187 14.998 -3.699 -1.593 2.742 H011 XZR 52 XZR H021 H17 H 0 0 N N N N N N -23.961 -13.405 15.112 -3.429 -2.136 -0.250 H021 XZR 53 XZR H301 H18 H 0 0 N N N N N N -27.561 -13.536 12.739 -7.771 -0.888 1.445 H301 XZR 54 XZR H311 H19 H 0 0 N N N N N N -29.091 -14.997 14.009 -9.641 0.705 1.280 H311 XZR 55 XZR H331 H20 H 0 0 N N N N N N -29.284 -16.395 16.140 -10.317 2.727 -1.710 H331 XZR 56 XZR H332 H21 H 0 0 N N N N N N -28.722 -15.663 17.681 -10.984 2.102 -0.183 H332 XZR 57 XZR H351 H22 H 0 0 N N N N N N -27.134 -13.861 17.634 -8.043 2.203 -2.379 H351 XZR 58 XZR H361 H23 H 0 0 N N N N N N -25.646 -12.362 16.369 -6.169 0.614 -2.211 H361 XZR 59 XZR H051 H24 H 0 0 N N N N N N -23.349 -10.390 12.450 -1.241 -3.147 -0.275 H051 XZR 60 XZR H341 H25 H 0 0 N N N N N N -31.053 -15.375 17.348 -10.488 4.452 -0.042 H341 XZR 61 XZR H342 H26 H 0 0 N N N N N N -30.299 -13.927 17.337 -9.469 3.613 0.970 H342 XZR 62 XZR H2 H28 H 0 1 N N N N N N -22.683 -7.603 10.056 1.429 -5.452 -1.415 H2 XZR 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal XZR O20 S17 DOUB N N 1 XZR S17 O19 DOUB N N 2 XZR S17 C18 SING N N 3 XZR S17 C16 SING N N 4 XZR C16 C15 SING N N 5 XZR C15 C21 DOUB Y N 6 XZR C15 C13 SING Y N 7 XZR CL14 C13 SING N N 8 XZR C21 C22 SING Y N 9 XZR C13 C12 DOUB Y N 10 XZR C22 C11 DOUB Y N 11 XZR C12 C11 SING Y N 12 XZR C11 C10 SING N N 13 XZR O08 C07 DOUB N N 14 XZR C07 C06 SING N N 15 XZR C07 O09 SING N N 16 XZR C10 C06 DOUB Y N 17 XZR C10 C23 SING Y N 18 XZR C06 N05 SING Y N 19 XZR C23 C24 DOUB Y N 20 XZR C23 C04 SING Y N 21 XZR C24 C25 SING Y N 22 XZR N05 C04 SING Y N 23 XZR C04 C03 DOUB Y N 24 XZR C25 C26 DOUB Y N 25 XZR C03 C26 SING Y N 26 XZR C03 C02 SING N N 27 XZR C28 O27 SING N N 28 XZR C28 C29 SING N N 29 XZR C30 C29 DOUB Y N 30 XZR C30 C31 SING Y N 31 XZR O27 C02 SING N N 32 XZR C29 C36 SING Y N 33 XZR C31 C32 DOUB Y N 34 XZR C02 C01 SING N N 35 XZR C36 C35 DOUB Y N 36 XZR C32 C35 SING Y N 37 XZR C32 C33 SING N N 38 XZR C33 N34 SING N N 39 XZR C25 H251 SING N N 40 XZR C24 H241 SING N N 41 XZR C26 H261 SING N N 42 XZR C22 H221 SING N N 43 XZR C21 H211 SING N N 44 XZR C28 H281 SING N N 45 XZR C28 H282 SING N N 46 XZR C18 H181 SING N N 47 XZR C18 H183 SING N N 48 XZR C18 H182 SING N N 49 XZR C16 H161 SING N N 50 XZR C16 H162 SING N N 51 XZR C12 H121 SING N N 52 XZR C01 H012 SING N N 53 XZR C01 H013 SING N N 54 XZR C01 H011 SING N N 55 XZR C02 H021 SING N N 56 XZR C30 H301 SING N N 57 XZR C31 H311 SING N N 58 XZR C33 H331 SING N N 59 XZR C33 H332 SING N N 60 XZR C35 H351 SING N N 61 XZR C36 H361 SING N N 62 XZR N05 H051 SING N N 63 XZR N34 H341 SING N N 64 XZR N34 H342 SING N N 65 XZR O09 H2 SING N N 66 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor XZR InChI InChI 1.06 "InChI=1S/C27H27ClN2O5S/c1-16(35-14-18-8-6-17(13-29)7-9-18)21-4-3-5-22-24(26(27(31)32)30-25(21)22)19-10-11-20(23(28)12-19)15-36(2,33)34/h3-12,16,30H,13-15,29H2,1-2H3,(H,31,32)/t16-/m1/s1" XZR InChIKey InChI 1.06 JCXDRPGSXCBCFR-MRXNPFEDSA-N XZR SMILES_CANONICAL CACTVS 3.385 "C[C@@H](OCc1ccc(CN)cc1)c2cccc3c2[nH]c(C(O)=O)c3c4ccc(C[S](C)(=O)=O)c(Cl)c4" XZR SMILES CACTVS 3.385 "C[CH](OCc1ccc(CN)cc1)c2cccc3c2[nH]c(C(O)=O)c3c4ccc(C[S](C)(=O)=O)c(Cl)c4" XZR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](c1cccc2c1[nH]c(c2c3ccc(c(c3)Cl)CS(=O)(=O)C)C(=O)O)OCc4ccc(cc4)CN" XZR SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1cccc2c1[nH]c(c2c3ccc(c(c3)Cl)CS(=O)(=O)C)C(=O)O)OCc4ccc(cc4)CN" # _pdbx_chem_comp_identifier.comp_id XZR _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "7-[(1~{R})-1-[[4-(aminomethyl)phenyl]methoxy]ethyl]-3-[3-chloranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site XZR "Create component" 2023-06-09 PDBE XZR "Initial release" 2024-06-26 RCSB #