data_Y0S # _chem_comp.id Y0S _chem_comp.name "N-[(3-methylthiophen-2-yl)methyl]benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H13 N O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-11-14 _chem_comp.pdbx_modified_date 2024-02-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 231.313 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y0S _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GRQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y0S C13 C1 C 0 1 Y N N N N N -28.713 -8.355 -26.956 -3.591 1.925 0.361 C13 Y0S 1 Y0S C15 C2 C 0 1 Y N N N N N -29.825 -6.263 -27.305 -4.936 -0.024 -0.022 C15 Y0S 2 Y0S C01 C3 C 0 1 N N N N N N -22.732 -2.918 -31.206 2.495 -0.748 2.321 C01 Y0S 3 Y0S C02 C4 C 0 1 Y N N N N N -24.244 -2.936 -31.408 2.946 -0.127 1.024 C02 Y0S 4 Y0S C03 C5 C 0 1 Y N N N N N -24.839 -2.428 -32.543 4.044 0.712 0.942 C03 Y0S 5 Y0S C04 C6 C 0 1 Y N N N N N -26.228 -2.545 -32.546 4.307 1.176 -0.280 C04 Y0S 6 Y0S C06 C7 C 0 1 Y N N N N N -25.072 -3.474 -30.445 2.321 -0.349 -0.133 C06 Y0S 7 Y0S C07 C8 C 0 1 N N N N N N -24.652 -4.084 -29.107 1.109 -1.226 -0.311 C07 Y0S 8 Y0S C09 C9 C 0 1 N N N N N N -26.256 -5.939 -28.659 -1.317 -1.001 -0.249 C09 Y0S 9 Y0S C11 C10 C 0 1 Y N N N N N -27.532 -6.528 -28.008 -2.541 -0.191 -0.071 C11 Y0S 10 Y0S C12 C11 C 0 1 Y N N N N N -27.561 -7.836 -27.531 -2.445 1.174 0.201 C12 Y0S 11 Y0S C14 C12 C 0 1 Y N N N N N -29.848 -7.568 -26.841 -4.834 1.328 0.253 C14 Y0S 12 Y0S C16 C13 C 0 1 Y N N N N N -28.675 -5.751 -27.888 -3.798 -0.786 -0.189 C16 Y0S 13 Y0S N08 N1 N 0 1 N N N N N N -25.857 -4.554 -28.444 -0.104 -0.424 -0.134 N08 Y0S 14 Y0S O10 O1 O 0 1 N N N N N N -25.547 -6.598 -29.357 -1.404 -2.187 -0.499 O10 Y0S 15 Y0S S05 S1 S 0 1 Y N N N N N -26.681 -3.317 -31.065 3.127 0.541 -1.419 S05 Y0S 16 Y0S H1 H1 H 0 1 N N N N N N -28.725 -9.374 -26.598 -3.517 2.981 0.576 H1 Y0S 17 Y0S H2 H2 H 0 1 N N N N N N -30.704 -5.643 -27.213 -5.910 -0.485 -0.106 H2 Y0S 18 Y0S H3 H3 H 0 1 N N N N N N -22.440 -1.985 -30.702 2.997 -1.705 2.459 H3 Y0S 19 Y0S H4 H4 H 0 1 N N N N N N -22.435 -3.777 -30.587 2.746 -0.083 3.148 H4 Y0S 20 Y0S H5 H5 H 0 1 N N N N N N -22.231 -2.979 -32.183 1.417 -0.903 2.294 H5 Y0S 21 Y0S H6 H6 H 0 1 N N N N N N -24.282 -1.982 -33.353 4.642 0.973 1.804 H6 Y0S 22 Y0S H7 H7 H 0 1 N N N N N N -26.897 -2.215 -33.327 5.121 1.840 -0.532 H7 Y0S 23 Y0S H8 H8 H 0 1 N N N N N N -23.964 -4.926 -29.277 1.116 -1.657 -1.312 H8 Y0S 24 Y0S H9 H9 H 0 1 N N N N N N -24.155 -3.324 -28.487 1.126 -2.025 0.430 H9 Y0S 25 Y0S H10 H10 H 0 1 N N N N N N -26.678 -8.453 -27.609 -1.475 1.642 0.286 H10 Y0S 26 Y0S H11 H11 H 0 1 N N N N N N -30.745 -7.970 -26.392 -5.728 1.919 0.383 H11 Y0S 27 Y0S H12 H12 H 0 1 N N N N N N -28.669 -4.735 -28.253 -3.880 -1.840 -0.411 H12 Y0S 28 Y0S H13 H13 H 0 1 N N N N N N -26.395 -3.947 -27.859 -0.035 0.523 0.065 H13 Y0S 29 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y0S C04 C03 DOUB Y N 1 Y0S C04 S05 SING Y N 2 Y0S C03 C02 SING Y N 3 Y0S C02 C01 SING N N 4 Y0S C02 C06 DOUB Y N 5 Y0S S05 C06 SING Y N 6 Y0S C06 C07 SING N N 7 Y0S O10 C09 DOUB N N 8 Y0S C07 N08 SING N N 9 Y0S C09 N08 SING N N 10 Y0S C09 C11 SING N N 11 Y0S C11 C16 DOUB Y N 12 Y0S C11 C12 SING Y N 13 Y0S C16 C15 SING Y N 14 Y0S C12 C13 DOUB Y N 15 Y0S C15 C14 DOUB Y N 16 Y0S C13 C14 SING Y N 17 Y0S C13 H1 SING N N 18 Y0S C15 H2 SING N N 19 Y0S C01 H3 SING N N 20 Y0S C01 H4 SING N N 21 Y0S C01 H5 SING N N 22 Y0S C03 H6 SING N N 23 Y0S C04 H7 SING N N 24 Y0S C07 H8 SING N N 25 Y0S C07 H9 SING N N 26 Y0S C12 H10 SING N N 27 Y0S C14 H11 SING N N 28 Y0S C16 H12 SING N N 29 Y0S N08 H13 SING N N 30 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y0S SMILES ACDLabs 12.01 "Cc1ccsc1CNC(=O)c1ccccc1" Y0S InChI InChI 1.06 "InChI=1S/C13H13NOS/c1-10-7-8-16-12(10)9-14-13(15)11-5-3-2-4-6-11/h2-8H,9H2,1H3,(H,14,15)" Y0S InChIKey InChI 1.06 WNIZEKJOPGQRGN-UHFFFAOYSA-N Y0S SMILES_CANONICAL CACTVS 3.385 "Cc1ccsc1CNC(=O)c2ccccc2" Y0S SMILES CACTVS 3.385 "Cc1ccsc1CNC(=O)c2ccccc2" Y0S SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccsc1CNC(=O)c2ccccc2" Y0S SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccsc1CNC(=O)c2ccccc2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Y0S "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(3-methylthiophen-2-yl)methyl]benzamide" Y0S "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(3-methylthiophen-2-yl)methyl]benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y0S "Create component" 2023-11-14 RCSB Y0S "Initial release" 2024-02-14 RCSB #