data_Y21 # _chem_comp.id Y21 _chem_comp.name "(3S)-10-[(3R)-3-(1-aminocyclopropyl)pyrrolidin-1-yl]-9-fluoro-3-methyl-5-oxo-2,3-dihydro-5H-[1,4]oxazino[2,3,4-ij]quinoline-6-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H22 F N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-01-27 _chem_comp.pdbx_modified_date 2021-05-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 387.405 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y21 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7LHZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y21 C1 C1 C 0 1 Y N N 86.943 -56.364 59.914 0.796 -1.393 -0.294 C1 Y21 1 Y21 C2 C2 C 0 1 Y N N 86.472 -55.079 59.616 0.929 -0.002 -0.359 C2 Y21 2 Y21 C3 C3 C 0 1 Y N N 86.231 -54.183 60.666 -0.191 0.815 -0.283 C3 Y21 3 Y21 C12 C4 C 0 1 N N S 85.717 -52.307 62.748 -2.422 2.523 -0.082 C12 Y21 4 Y21 C13 C5 C 0 1 N N N 86.416 -54.002 64.364 -3.803 0.529 0.071 C13 Y21 5 Y21 C14 C6 C 0 1 N N N 86.912 -55.353 64.716 -3.974 -0.926 0.127 C14 Y21 6 Y21 C16 C7 C 0 1 N N N 84.941 -52.344 61.409 -1.174 2.884 -0.894 C16 Y21 7 Y21 C17 C8 C 0 1 N N N 86.935 -51.350 62.663 -2.275 3.054 1.345 C17 Y21 8 Y21 C18 C9 C 0 1 N N N 85.623 -55.602 57.364 2.807 0.182 -1.790 C18 Y21 9 Y21 C19 C10 C 0 1 N N N 85.032 -54.569 56.380 4.324 0.083 -1.493 C19 Y21 10 Y21 C20 C11 C 0 1 N N R 86.126 -53.476 56.341 4.325 -0.515 -0.061 C20 Y21 11 Y21 C21 C12 C 0 1 N N N 86.648 -53.410 57.800 3.090 0.142 0.591 C21 Y21 12 Y21 C22 C13 C 0 1 N N N 85.578 -52.120 55.832 5.602 -0.127 0.687 C22 Y21 13 Y21 C24 C14 C 0 1 N N N 84.673 -52.189 54.580 6.385 -1.246 1.375 C24 Y21 14 Y21 C25 C15 C 0 1 N N N 84.055 -51.909 55.970 6.934 -0.599 0.102 C25 Y21 15 Y21 C26 C16 C 0 1 N N N 87.141 -55.723 66.138 -5.316 -1.511 0.261 C26 Y21 16 Y21 C4 C17 C 0 1 Y N N 86.456 -54.559 62.000 -1.456 0.252 -0.139 C4 Y21 17 Y21 C5 C18 C 0 1 Y N N 86.925 -55.842 62.287 -1.582 -1.152 -0.082 C5 Y21 18 Y21 C6 C19 C 0 1 Y N N 87.165 -56.743 61.243 -0.435 -1.962 -0.158 C6 Y21 19 Y21 C7 C20 C 0 1 N N N 87.151 -56.231 63.731 -2.857 -1.743 0.051 C7 Y21 20 Y21 F8 F1 F 0 1 N N N 87.185 -57.243 58.944 1.894 -2.177 -0.372 F8 Y21 21 Y21 N11 N1 N 0 1 N N N 86.206 -53.650 63.068 -2.572 1.063 -0.049 N11 Y21 22 Y21 N23 N2 N 0 1 N N N 86.409 -50.915 56.016 5.577 1.187 1.343 N23 Y21 23 Y21 N9 N3 N 0 1 N N N 86.264 -54.715 58.324 2.194 0.567 -0.501 N9 Y21 24 Y21 O10 O1 O 0 1 N N N 85.764 -52.902 60.383 -0.055 2.168 -0.356 O10 Y21 25 Y21 O15 O2 O 0 1 N N N 86.209 -53.224 65.285 -4.777 1.257 0.134 O15 Y21 26 Y21 O27 O3 O 0 1 N N N 87.857 -56.675 66.412 -5.450 -2.719 0.307 O27 Y21 27 Y21 O28 O4 O 0 1 N N N 86.558 -55.017 67.114 -6.397 -0.710 0.334 O28 Y21 28 Y21 H1 H1 H 0 1 N N N 85.042 -51.953 63.541 -3.301 2.969 -0.548 H1 Y21 29 Y21 H2 H2 H 0 1 N N N 84.651 -51.321 61.127 -1.321 2.602 -1.936 H2 Y21 30 Y21 H3 H3 H 0 1 N N N 84.038 -52.961 61.528 -0.992 3.956 -0.827 H3 Y21 31 Y21 H4 H4 H 0 1 N N N 87.466 -51.344 63.627 -1.395 2.609 1.810 H4 Y21 32 Y21 H5 H5 H 0 1 N N N 87.617 -51.694 61.871 -2.164 4.138 1.320 H5 Y21 33 Y21 H6 H6 H 0 1 N N N 86.586 -50.333 62.431 -3.162 2.793 1.923 H6 Y21 34 Y21 H7 H7 H 0 1 N N N 84.837 -56.211 57.835 2.617 0.946 -2.543 H7 Y21 35 Y21 H8 H8 H 0 1 N N N 86.352 -56.262 56.871 2.420 -0.782 -2.121 H8 Y21 36 Y21 H9 H9 H 0 1 N N N 84.080 -54.165 56.753 4.817 -0.587 -2.196 H9 Y21 37 Y21 H10 H10 H 0 1 N N N 84.877 -55.012 55.385 4.789 1.069 -1.505 H10 Y21 38 Y21 H11 H11 H 0 1 N N N 86.942 -53.806 55.681 4.212 -1.599 -0.096 H11 Y21 39 Y21 H12 H12 H 0 1 N N N 87.739 -53.275 57.827 2.580 -0.580 1.229 H12 Y21 40 Y21 H13 H13 H 0 1 N N N 86.164 -52.597 58.360 3.396 1.008 1.177 H13 Y21 41 Y21 H14 H14 H 0 1 N N N 84.715 -51.390 53.825 6.883 -1.008 2.315 H14 Y21 42 Y21 H15 H15 H 0 1 N N N 84.494 -53.154 54.083 5.991 -2.259 1.296 H15 Y21 43 Y21 H16 H16 H 0 1 N N N 83.657 -50.910 56.204 6.901 -1.187 -0.816 H16 Y21 44 Y21 H17 H17 H 0 1 N N N 83.436 -52.674 56.461 7.792 0.065 0.204 H17 Y21 45 Y21 H18 H18 H 0 1 N N N 87.524 -57.737 61.464 -0.529 -3.037 -0.109 H18 Y21 46 Y21 H19 H19 H 0 1 N N N 87.507 -57.222 63.970 -2.961 -2.817 0.093 H19 Y21 47 Y21 H20 H20 H 0 1 N N N 86.940 -51.001 56.859 6.449 1.372 1.815 H20 Y21 48 Y21 H21 H21 H 0 1 N N N 87.030 -50.817 55.239 5.362 1.918 0.682 H21 Y21 49 Y21 H23 H23 H 0 1 N N N 86.800 -55.382 67.957 -7.258 -1.141 0.422 H23 Y21 50 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y21 C24 C22 SING N N 1 Y21 C24 C25 SING N N 2 Y21 C22 C25 SING N N 3 Y21 C22 N23 SING N N 4 Y21 C22 C20 SING N N 5 Y21 C20 C19 SING N N 6 Y21 C20 C21 SING N N 7 Y21 C19 C18 SING N N 8 Y21 C18 N9 SING N N 9 Y21 C21 N9 SING N N 10 Y21 N9 C2 SING N N 11 Y21 F8 C1 SING N N 12 Y21 C2 C1 DOUB Y N 13 Y21 C2 C3 SING Y N 14 Y21 C1 C6 SING Y N 15 Y21 O10 C3 SING N N 16 Y21 O10 C16 SING N N 17 Y21 C3 C4 DOUB Y N 18 Y21 C6 C5 DOUB Y N 19 Y21 C16 C12 SING N N 20 Y21 C4 C5 SING Y N 21 Y21 C4 N11 SING N N 22 Y21 C5 C7 SING N N 23 Y21 C17 C12 SING N N 24 Y21 C12 N11 SING N N 25 Y21 N11 C13 SING N N 26 Y21 C7 C14 DOUB N N 27 Y21 C13 C14 SING N N 28 Y21 C13 O15 DOUB N N 29 Y21 C14 C26 SING N N 30 Y21 C26 O27 DOUB N N 31 Y21 C26 O28 SING N N 32 Y21 C12 H1 SING N N 33 Y21 C16 H2 SING N N 34 Y21 C16 H3 SING N N 35 Y21 C17 H4 SING N N 36 Y21 C17 H5 SING N N 37 Y21 C17 H6 SING N N 38 Y21 C18 H7 SING N N 39 Y21 C18 H8 SING N N 40 Y21 C19 H9 SING N N 41 Y21 C19 H10 SING N N 42 Y21 C20 H11 SING N N 43 Y21 C21 H12 SING N N 44 Y21 C21 H13 SING N N 45 Y21 C24 H14 SING N N 46 Y21 C24 H15 SING N N 47 Y21 C25 H16 SING N N 48 Y21 C25 H17 SING N N 49 Y21 C6 H18 SING N N 50 Y21 C7 H19 SING N N 51 Y21 N23 H20 SING N N 52 Y21 N23 H21 SING N N 53 Y21 O28 H23 SING N N 54 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y21 SMILES ACDLabs 12.01 "c1(cc4c5c(c1N2CCC(C2)C3(CC3)N)OCC(N5C(C(C(=O)O)=C4)=O)C)F" Y21 InChI InChI 1.03 "InChI=1S/C20H22FN3O4/c1-10-9-28-17-15-11(6-13(19(26)27)18(25)24(10)15)7-14(21)16(17)23-5-2-12(8-23)20(22)3-4-20/h6-7,10,12H,2-5,8-9,22H2,1H3,(H,26,27)/t10-,12+/m0/s1" Y21 InChIKey InChI 1.03 KUJKUYSIFHKKCZ-CMPLNLGQSA-N Y21 SMILES_CANONICAL CACTVS 3.385 "C[C@H]1COc2c(N3CC[C@H](C3)C4(N)CC4)c(F)cc5C=C(C(O)=O)C(=O)N1c25" Y21 SMILES CACTVS 3.385 "C[CH]1COc2c(N3CC[CH](C3)C4(N)CC4)c(F)cc5C=C(C(O)=O)C(=O)N1c25" Y21 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1COc2c3c(cc(c2N4CC[C@H](C4)C5(CC5)N)F)C=C(C(=O)N31)C(=O)O" Y21 SMILES "OpenEye OEToolkits" 2.0.7 "CC1COc2c3c(cc(c2N4CCC(C4)C5(CC5)N)F)C=C(C(=O)N31)C(=O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Y21 "SYSTEMATIC NAME" ACDLabs 12.01 "(3S)-10-[(3R)-3-(1-aminocyclopropyl)pyrrolidin-1-yl]-9-fluoro-3-methyl-5-oxo-2,3-dihydro-5H-[1,4]oxazino[2,3,4-ij]quinoline-6-carboxylic acid" Y21 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-6-[(3~{R})-3-(1-azanylcyclopropyl)pyrrolidin-1-yl]-7-fluoranyl-2-methyl-12-oxidanylidene-4-oxa-1-azatricyclo[7.3.1.0^{5,13}]trideca-5(13),6,8,10-tetraene-11-carboxylic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y21 "Create component" 2021-01-27 RCSB Y21 "Initial release" 2021-05-12 RCSB ##