data_Y26 # _chem_comp.id Y26 _chem_comp.name "propyl (2R,3S)-2-(carbamimidamidomethyl)-3-[2-(4-chloro-3-fluoroanilino)(oxo)acetamido]-6-[(methylamino)methyl]-2,3-dihydro-1H-indole-1-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H29 Cl F N7 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-27 _chem_comp.pdbx_modified_date 2023-03-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 533.983 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y26 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8FM3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y26 N12 N1 N 0 1 N N N -23.773 -2.412 -79.733 2.518 -5.502 -1.209 N12 Y26 1 Y26 C17 C1 C 0 1 N N N -24.974 2.142 -75.813 -2.699 -0.114 -0.359 C17 Y26 2 Y26 C20 C2 C 0 1 Y N N -24.107 5.028 -75.367 -5.165 0.998 0.568 C20 Y26 3 Y26 C21 C3 C 0 1 Y N N -23.898 6.374 -75.371 -6.410 1.212 1.132 C21 Y26 4 Y26 C26 C4 C 0 1 Y N N -22.964 4.883 -77.438 -6.177 -0.372 -1.130 C26 Y26 5 Y26 C02 C5 C 0 1 N N N -29.925 -1.666 -76.628 4.134 -0.860 1.212 C02 Y26 6 Y26 C04 C6 C 0 1 N N N -31.386 -1.347 -78.441 6.197 -0.212 2.222 C04 Y26 7 Y26 C05 C7 C 0 1 N N N -31.363 -1.866 -79.923 7.181 0.961 2.216 C05 Y26 8 Y26 C06 C8 C 0 1 N N N -31.193 -3.379 -79.990 8.343 0.656 3.163 C06 Y26 9 Y26 C08 C9 C 0 1 N N R -27.420 -1.571 -76.732 1.928 -1.548 0.269 C08 Y26 10 Y26 C09 C10 C 0 1 N N N -27.113 -2.678 -77.724 2.376 -2.927 -0.220 C09 Y26 11 Y26 C11 C11 C 0 1 N N N -24.820 -2.913 -78.797 1.363 -5.104 -0.754 C11 Y26 12 Y26 C14 C12 C 0 1 N N S -26.384 -1.423 -75.644 1.015 -0.883 -0.773 C14 Y26 13 Y26 C16 C13 C 0 1 N N N -25.148 0.615 -76.046 -1.375 -0.448 -0.964 C16 Y26 14 Y26 C19 C14 C 0 1 Y N N -23.601 4.268 -76.393 -5.046 0.207 -0.567 C19 Y26 15 Y26 C23 C15 C 0 1 Y N N -23.217 7.009 -76.399 -7.536 0.633 0.567 C23 Y26 16 Y26 C25 C16 C 0 1 Y N N -22.755 6.259 -77.435 -7.417 -0.160 -0.560 C25 Y26 17 Y26 C29 C17 C 0 1 Y N N -28.409 -2.232 -74.633 2.931 0.446 -0.456 C29 Y26 18 Y26 C30 C18 C 0 1 Y N N -27.050 -1.980 -74.327 1.746 0.379 -1.171 C30 Y26 19 Y26 C31 C19 C 0 1 Y N N -26.550 -2.206 -73.035 1.412 1.375 -2.068 C31 Y26 20 Y26 C32 C20 C 0 1 Y N N -27.410 -2.722 -72.026 2.261 2.449 -2.261 C32 Y26 21 Y26 C33 C21 C 0 1 Y N N -28.768 -2.997 -72.333 3.446 2.525 -1.553 C33 Y26 22 Y26 C34 C22 C 0 1 N N N -29.676 -3.559 -71.252 4.373 3.695 -1.762 C34 Y26 23 Y26 C36 C23 C 0 1 N N N -31.630 -2.154 -71.090 4.911 5.928 -0.996 C36 Y26 24 Y26 C37 C24 C 0 1 Y N N -29.267 -2.747 -73.626 3.783 1.534 -0.656 C37 Y26 25 Y26 F22 F1 F 0 1 N N N -24.374 7.087 -74.323 -6.529 1.986 2.233 F22 Y26 26 Y26 N07 N2 N 0 1 N N N -28.583 -1.884 -76.013 3.082 -0.654 0.395 N07 Y26 27 Y26 N10 N3 N 0 1 N N N -26.079 -2.195 -78.675 1.226 -3.833 -0.248 N10 Y26 28 Y26 N13 N4 N 0 1 N N N -24.591 -3.977 -78.103 0.283 -5.954 -0.780 N13 Y26 29 Y26 N15 N5 N 0 1 N N N -26.265 -0.086 -75.410 -0.284 -0.556 -0.180 N15 Y26 30 Y26 N18 N6 N 0 1 N N N -23.826 2.798 -76.485 -3.790 -0.007 -1.142 N18 Y26 31 Y26 N35 N7 N 0 1 N N N -30.259 -2.451 -70.534 4.026 4.768 -0.820 N35 Y26 32 Y26 O01 O1 O 0 1 N N N -30.884 -1.718 -75.979 4.216 -1.891 1.849 O01 Y26 33 Y26 O03 O2 O 0 1 N N N -30.028 -1.401 -77.990 5.094 0.078 1.323 O03 Y26 34 Y26 O27 O3 O 0 1 N N N -25.741 2.715 -75.110 -2.793 0.060 0.839 O27 Y26 35 Y26 O28 O4 O 0 1 N N N -24.391 0.010 -76.737 -1.282 -0.622 -2.161 O28 Y26 36 Y26 CL24 CL1 CL 0 0 N N N -22.963 8.751 -76.382 -9.097 0.903 1.276 CL24 Y26 37 Y26 H1 H1 H 0 1 N N N -22.955 -2.988 -79.723 2.615 -6.399 -1.566 H1 Y26 38 Y26 H2 H2 H 0 1 N N N -24.664 4.564 -74.567 -4.288 1.449 1.008 H2 Y26 39 Y26 H3 H3 H 0 1 N N N -22.620 4.293 -78.275 -6.086 -0.991 -2.010 H3 Y26 40 Y26 H4 H4 H 0 1 N N N -31.762 -0.314 -78.402 6.708 -1.116 1.891 H4 Y26 41 Y26 H5 H5 H 0 1 N N N -32.023 -1.993 -77.818 5.814 -0.359 3.231 H5 Y26 42 Y26 H6 H6 H 0 1 N N N -30.526 -1.390 -80.454 7.564 1.109 1.206 H6 Y26 43 Y26 H7 H7 H 0 1 N N N -32.310 -1.592 -80.411 6.670 1.865 2.547 H7 Y26 44 Y26 H8 H8 H 0 1 N N N -31.182 -3.701 -81.042 7.960 0.508 4.172 H8 Y26 45 Y26 H9 H9 H 0 1 N N N -30.245 -3.663 -79.510 8.854 -0.249 2.832 H9 Y26 46 Y26 H10 H10 H 0 1 N N N -32.029 -3.865 -79.467 9.044 1.491 3.159 H10 Y26 47 Y26 H11 H11 H 0 1 N N N -27.530 -0.617 -77.269 1.411 -1.635 1.225 H11 Y26 48 Y26 H12 H12 H 0 1 N N N -28.027 -2.944 -78.275 2.794 -2.838 -1.223 H12 Y26 49 Y26 H13 H13 H 0 1 N N N -26.738 -3.562 -77.187 3.135 -3.323 0.455 H13 Y26 50 Y26 H14 H14 H 0 1 N N N -25.445 -1.946 -75.877 0.884 -1.536 -1.636 H14 Y26 51 Y26 H15 H15 H 0 1 N N N -22.228 6.729 -78.252 -8.296 -0.610 -0.998 H15 Y26 52 Y26 H16 H16 H 0 1 N N N -25.517 -1.989 -72.808 0.486 1.315 -2.621 H16 Y26 53 Y26 H17 H17 H 0 1 N N N -27.031 -2.904 -71.031 1.999 3.227 -2.963 H17 Y26 54 Y26 H18 H18 H 0 1 N N N -30.471 -4.165 -71.711 5.402 3.379 -1.590 H18 Y26 55 Y26 H19 H19 H 0 1 N N N -29.091 -4.184 -70.561 4.271 4.061 -2.783 H19 Y26 56 Y26 H20 H20 H 0 1 N N N -32.073 -1.309 -70.542 4.812 6.310 -2.012 H20 Y26 57 Y26 H21 H21 H 0 1 N N N -31.545 -1.895 -72.156 4.632 6.708 -0.287 H21 Y26 58 Y26 H22 H22 H 0 1 N N N -32.271 -3.041 -70.978 5.943 5.628 -0.818 H22 Y26 59 Y26 H23 H23 H 0 1 N N N -30.304 -2.947 -73.852 4.710 1.599 -0.105 H23 Y26 60 Y26 H24 H24 H 0 1 N N N -26.248 -1.380 -79.229 0.366 -3.536 0.090 H24 Y26 61 Y26 H25 H25 H 0 1 N N N -25.285 -4.320 -77.469 0.381 -6.851 -1.137 H25 Y26 62 Y26 H26 H26 H 0 1 N N N -23.720 -4.459 -78.199 -0.576 -5.657 -0.442 H26 Y26 63 Y26 H27 H27 H 0 1 N N N -26.916 0.398 -74.826 -0.359 -0.417 0.777 H27 Y26 64 Y26 H28 H28 H 0 1 N N N -23.187 2.239 -77.013 -3.704 -0.077 -2.106 H28 Y26 65 Y26 H29 H29 H 0 1 N N N -30.336 -2.686 -69.565 3.058 5.034 -0.916 H29 Y26 66 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y26 C06 C05 SING N N 1 Y26 C05 C04 SING N N 2 Y26 N12 C11 DOUB N N 3 Y26 C11 N10 SING N N 4 Y26 C11 N13 SING N N 5 Y26 N10 C09 SING N N 6 Y26 C04 O03 SING N N 7 Y26 O03 C02 SING N N 8 Y26 C09 C08 SING N N 9 Y26 C26 C25 DOUB Y N 10 Y26 C26 C19 SING Y N 11 Y26 C25 C23 SING Y N 12 Y26 O28 C16 DOUB N N 13 Y26 C08 N07 SING N N 14 Y26 C08 C14 SING N N 15 Y26 C02 N07 SING N N 16 Y26 C02 O01 DOUB N N 17 Y26 N18 C19 SING N N 18 Y26 N18 C17 SING N N 19 Y26 C23 CL24 SING N N 20 Y26 C23 C21 DOUB Y N 21 Y26 C19 C20 DOUB Y N 22 Y26 C16 C17 SING N N 23 Y26 C16 N15 SING N N 24 Y26 N07 C29 SING N N 25 Y26 C17 O27 DOUB N N 26 Y26 C14 N15 SING N N 27 Y26 C14 C30 SING N N 28 Y26 C21 C20 SING Y N 29 Y26 C21 F22 SING N N 30 Y26 C29 C30 DOUB Y N 31 Y26 C29 C37 SING Y N 32 Y26 C30 C31 SING Y N 33 Y26 C37 C33 DOUB Y N 34 Y26 C31 C32 DOUB Y N 35 Y26 C33 C32 SING Y N 36 Y26 C33 C34 SING N N 37 Y26 C34 N35 SING N N 38 Y26 C36 N35 SING N N 39 Y26 N12 H1 SING N N 40 Y26 C20 H2 SING N N 41 Y26 C26 H3 SING N N 42 Y26 C04 H4 SING N N 43 Y26 C04 H5 SING N N 44 Y26 C05 H6 SING N N 45 Y26 C05 H7 SING N N 46 Y26 C06 H8 SING N N 47 Y26 C06 H9 SING N N 48 Y26 C06 H10 SING N N 49 Y26 C08 H11 SING N N 50 Y26 C09 H12 SING N N 51 Y26 C09 H13 SING N N 52 Y26 C14 H14 SING N N 53 Y26 C25 H15 SING N N 54 Y26 C31 H16 SING N N 55 Y26 C32 H17 SING N N 56 Y26 C34 H18 SING N N 57 Y26 C34 H19 SING N N 58 Y26 C36 H20 SING N N 59 Y26 C36 H21 SING N N 60 Y26 C36 H22 SING N N 61 Y26 C37 H23 SING N N 62 Y26 N10 H24 SING N N 63 Y26 N13 H25 SING N N 64 Y26 N13 H26 SING N N 65 Y26 N15 H27 SING N N 66 Y26 N18 H28 SING N N 67 Y26 N35 H29 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y26 SMILES ACDLabs 12.01 "Clc1ccc(cc1F)NC(=O)C(=O)NC1c2ccc(cc2N(C1CNC(=N)N)C(=O)OCCC)CNC" Y26 InChI InChI 1.06 "InChI=1S/C24H29ClFN7O4/c1-3-8-37-24(36)33-18-9-13(11-29-2)4-6-15(18)20(19(33)12-30-23(27)28)32-22(35)21(34)31-14-5-7-16(25)17(26)10-14/h4-7,9-10,19-20,29H,3,8,11-12H2,1-2H3,(H,31,34)(H,32,35)(H4,27,28,30)/t19-,20+/m1/s1" Y26 InChIKey InChI 1.06 YVEFINLMFLWNTD-UXHICEINSA-N Y26 SMILES_CANONICAL CACTVS 3.385 "CCCOC(=O)N1[C@H](CNC(N)=N)[C@@H](NC(=O)C(=O)Nc2ccc(Cl)c(F)c2)c3ccc(CNC)cc13" Y26 SMILES CACTVS 3.385 "CCCOC(=O)N1[CH](CNC(N)=N)[CH](NC(=O)C(=O)Nc2ccc(Cl)c(F)c2)c3ccc(CNC)cc13" Y26 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/N)\NC[C@@H]1[C@H](c2ccc(cc2N1C(=O)OCCC)CNC)NC(=O)C(=O)Nc3ccc(c(c3)F)Cl" Y26 SMILES "OpenEye OEToolkits" 2.0.7 "CCCOC(=O)N1c2cc(ccc2C(C1CNC(=N)N)NC(=O)C(=O)Nc3ccc(c(c3)F)Cl)CNC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Y26 "SYSTEMATIC NAME" ACDLabs 12.01 "propyl (2R,3S)-2-(carbamimidamidomethyl)-3-[2-(4-chloro-3-fluoroanilino)(oxo)acetamido]-6-[(methylamino)methyl]-2,3-dihydro-1H-indole-1-carboxylate" Y26 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "propyl (2~{R},3~{S})-2-(carbamimidamidomethyl)-3-[[2-[(4-chloranyl-3-fluoranyl-phenyl)amino]-2-oxidanylidene-ethanoyl]amino]-6-(methylaminomethyl)-2,3-dihydroindole-1-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y26 "Create component" 2022-12-27 RCSB Y26 "Initial release" 2023-04-05 RCSB #