data_Y2L # _chem_comp.id Y2L _chem_comp.name "4-methyl-5-({2-[(5-methyl-2H-tetrazol-2-yl)methyl]-4-(trifluoromethyl)phenoxy}methyl)-2,4-dihydro-3H-1,2,4-triazol-3-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H14 F3 N7 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-09 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 369.302 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y2L _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G7S _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y2L C10 C1 C 0 1 Y N N N N N -12.496 4.903 45.887 -0.649 1.889 0.393 C10 Y2L 1 Y2L C11 C2 C 0 1 Y N N N N N -12.786 6.123 45.194 -0.270 0.743 -0.290 C11 Y2L 2 Y2L O12 O1 O 0 1 N N N N N N -13.417 7.193 45.718 1.046 0.428 -0.415 O12 Y2L 3 Y2L C13 C3 C 0 1 N N N N N N -13.847 7.060 47.044 1.986 1.324 0.183 C13 Y2L 4 Y2L C16 C4 C 0 1 N N N N N N -14.505 10.506 48.293 5.587 0.675 -0.028 C16 Y2L 5 Y2L C20 C5 C 0 1 N N N N N N -12.198 9.802 47.559 4.620 2.667 1.143 C20 Y2L 6 Y2L C23 C6 C 0 1 Y N N N N N -10.309 9.826 43.700 -1.015 -4.087 0.597 C23 Y2L 7 Y2L C26 C7 C 0 1 N N N N N N -9.490 10.822 44.386 -1.710 -5.221 1.305 C26 Y2L 8 Y2L C1 C8 C 0 1 N N N N N N -12.869 7.482 43.072 -0.829 -1.329 -1.588 C1 Y2L 9 Y2L C2 C9 C 0 1 Y N N N N N -12.424 6.307 43.880 -1.237 -0.083 -0.846 C2 Y2L 10 Y2L C3 C10 C 0 1 Y N N N N N -11.732 5.299 43.216 -2.574 0.239 -0.717 C3 Y2L 11 Y2L C4 C11 C 0 1 Y N N N N N -11.456 4.127 43.887 -2.950 1.382 -0.036 C4 Y2L 12 Y2L C5 C12 C 0 1 N N N N N N -10.720 3.038 43.176 -4.409 1.731 0.102 C5 Y2L 13 Y2L F6 F1 F 0 1 N N N N N N -11.439 1.940 43.034 -4.919 1.150 1.269 F6 Y2L 14 Y2L F7 F2 F 0 1 N N N N N N -10.298 3.378 41.947 -4.552 3.121 0.173 F7 Y2L 15 Y2L F8 F3 F 0 1 N N N N N N -9.650 2.598 43.816 -5.112 1.245 -1.006 F8 Y2L 16 Y2L C9 C13 C 0 1 Y N N N N N -11.832 3.906 45.213 -1.988 2.203 0.523 C9 Y2L 17 Y2L C14 C14 C 0 1 N N N N N N -14.395 8.360 47.534 3.385 0.816 -0.056 C14 Y2L 18 Y2L N15 N1 N 0 1 N N N N N N -13.616 9.538 47.772 4.540 1.422 0.376 N15 Y2L 19 Y2L N17 N2 N 0 1 N N N N N N -15.736 9.841 48.321 5.091 -0.384 -0.703 N17 Y2L 20 Y2L N18 N3 N 0 1 N N N N N N -15.688 8.556 47.869 3.695 -0.266 -0.696 N18 Y2L 21 Y2L O19 O2 O 0 1 N N N N N N -14.221 11.641 48.633 6.764 0.914 0.174 O19 Y2L 22 Y2L N21 N4 N 0 1 Y N N N N N -11.725 8.345 43.078 -0.641 -2.425 -0.635 N21 Y2L 23 Y2L N22 N5 N 0 1 Y N N N N N -11.440 9.207 44.159 -1.555 -3.252 -0.256 N22 Y2L 24 Y2L N24 N6 N 0 1 Y N N N N N -9.968 9.320 42.396 0.265 -3.737 0.724 N24 Y2L 25 Y2L N25 N7 N 0 1 Y N N N N N -10.827 8.432 42.048 0.465 -2.722 -0.046 N25 Y2L 26 Y2L H31 H1 H 0 1 N N N N N N -12.793 4.770 46.917 0.102 2.533 0.827 H31 Y2L 27 Y2L H33 H2 H 0 1 N N N N N N -14.631 6.290 47.098 1.878 2.313 -0.261 H33 Y2L 28 Y2L H32 H3 H 0 1 N N N N N N -12.997 6.762 47.675 1.800 1.384 1.255 H32 Y2L 29 Y2L H35 H4 H 0 1 N N N N N N -11.967 10.833 47.864 4.594 2.440 2.208 H35 Y2L 30 Y2L H37 H5 H 0 1 N N N N N N -11.600 9.100 48.159 5.550 3.182 0.904 H37 Y2L 31 Y2L H36 H6 H 0 1 N N N N N N -11.957 9.672 46.494 3.775 3.306 0.887 H36 Y2L 32 Y2L H40 H7 H 0 1 N N N N N N -9.917 11.028 45.378 -2.127 -4.862 2.246 H40 Y2L 33 Y2L H38 H8 H 0 1 N N N N N N -8.466 10.438 44.501 -2.513 -5.605 0.675 H38 Y2L 34 Y2L H39 H9 H 0 1 N N N N N N -9.470 11.750 43.795 -0.994 -6.018 1.505 H39 Y2L 35 Y2L H28 H10 H 0 1 N N N N N N -13.127 7.179 42.047 -1.607 -1.598 -2.302 H28 Y2L 36 Y2L H27 H11 H 0 1 N N N N N N -13.735 7.974 43.538 0.105 -1.146 -2.120 H27 Y2L 37 Y2L H29 H12 H 0 1 N N N N N N -11.416 5.433 42.192 -3.328 -0.403 -1.150 H29 Y2L 38 Y2L H30 H13 H 0 1 N N N N N N -11.605 2.969 45.700 -2.284 3.096 1.055 H30 Y2L 39 Y2L H34 H14 H 0 1 N N N N N N -16.578 10.272 48.645 5.606 -1.094 -1.116 H34 Y2L 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y2L C1 C2 SING N N 1 Y2L C1 N21 SING N N 2 Y2L C2 C3 DOUB Y N 3 Y2L C2 C11 SING Y N 4 Y2L C3 C4 SING Y N 5 Y2L C4 C5 SING N N 6 Y2L C4 C9 DOUB Y N 7 Y2L C5 F6 SING N N 8 Y2L C5 F7 SING N N 9 Y2L C5 F8 SING N N 10 Y2L C9 C10 SING Y N 11 Y2L C10 C11 DOUB Y N 12 Y2L C11 O12 SING N N 13 Y2L O12 C13 SING N N 14 Y2L C13 C14 SING N N 15 Y2L C14 N15 SING N N 16 Y2L C14 N18 DOUB N N 17 Y2L N15 C16 SING N N 18 Y2L N15 C20 SING N N 19 Y2L C16 N17 SING N N 20 Y2L C16 O19 DOUB N N 21 Y2L N17 N18 SING N N 22 Y2L N21 N22 SING Y N 23 Y2L N21 N25 SING Y N 24 Y2L N22 C23 DOUB Y N 25 Y2L C23 N24 SING Y N 26 Y2L C23 C26 SING N N 27 Y2L N24 N25 DOUB Y N 28 Y2L C10 H31 SING N N 29 Y2L C13 H33 SING N N 30 Y2L C13 H32 SING N N 31 Y2L C20 H35 SING N N 32 Y2L C20 H37 SING N N 33 Y2L C20 H36 SING N N 34 Y2L C26 H40 SING N N 35 Y2L C26 H38 SING N N 36 Y2L C26 H39 SING N N 37 Y2L C1 H28 SING N N 38 Y2L C1 H27 SING N N 39 Y2L C3 H29 SING N N 40 Y2L C9 H30 SING N N 41 Y2L N17 H34 SING N N 42 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y2L SMILES ACDLabs 12.01 "FC(F)(F)c1cc(Cn2nc(C)nn2)c(cc1)OCC1=NNC(=O)N1C" Y2L InChI InChI 1.06 "InChI=1S/C14H14F3N7O2/c1-8-18-22-24(21-8)6-9-5-10(14(15,16)17)3-4-11(9)26-7-12-19-20-13(25)23(12)2/h3-5H,6-7H2,1-2H3,(H,20,25)" Y2L InChIKey InChI 1.06 KCJQOLUHLQCUST-UHFFFAOYSA-N Y2L SMILES_CANONICAL CACTVS 3.385 "CN1C(=O)NN=C1COc2ccc(cc2Cn3nnc(C)n3)C(F)(F)F" Y2L SMILES CACTVS 3.385 "CN1C(=O)NN=C1COc2ccc(cc2Cn3nnc(C)n3)C(F)(F)F" Y2L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1nnn(n1)Cc2cc(ccc2OCC3=NNC(=O)N3C)C(F)(F)F" Y2L SMILES "OpenEye OEToolkits" 2.0.7 "Cc1nnn(n1)Cc2cc(ccc2OCC3=NNC(=O)N3C)C(F)(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Y2L "SYSTEMATIC NAME" ACDLabs 12.01 "4-methyl-5-({2-[(5-methyl-2H-tetrazol-2-yl)methyl]-4-(trifluoromethyl)phenoxy}methyl)-2,4-dihydro-3H-1,2,4-triazol-3-one" Y2L "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-methyl-3-[[2-[(5-methyl-1,2,3,4-tetrazol-2-yl)methyl]-4-(trifluoromethyl)phenoxy]methyl]-1~{H}-1,2,4-triazol-5-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y2L "Create component" 2023-06-09 RCSB Y2L "Initial release" 2024-12-18 RCSB #