data_Y2N # _chem_comp.id Y2N _chem_comp.name "5-[2-(dimethylamino)ethoxy]-2-methyl-N-{(1R)-1-[(3P,5M)-3-(1-methyl-1H-pyrazol-4-yl)-5-(1,3-thiazol-5-yl)phenyl]ethyl}benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H31 N5 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-11-14 _chem_comp.pdbx_modified_date 2024-03-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 489.632 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y2N _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8UUW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y2N C1 C1 C 0 1 N N N N N N 47.599 32.818 1.103 -3.039 5.056 0.197 C1 Y2N 1 Y2N C2 C2 C 0 1 Y N N N N N 48.753 33.693 0.685 -3.511 3.625 0.168 C2 Y2N 2 Y2N C3 C3 C 0 1 Y N N N N N 50.004 33.170 0.313 -2.630 2.606 -0.198 C3 Y2N 3 Y2N C4 C4 C 0 1 N N N N N N 50.212 31.689 0.212 -1.232 2.928 -0.556 C4 Y2N 4 Y2N C11 C5 C 0 1 Y N N N N N 51.638 27.745 -3.538 5.336 0.544 0.720 C11 Y2N 5 Y2N C12 C6 C 0 1 Y N N N N N 52.104 27.663 -4.831 6.247 -0.395 1.107 C12 Y2N 6 Y2N C14 C7 C 0 1 N N N N N N 51.169 26.822 -7.004 8.543 -0.368 2.110 C14 Y2N 7 Y2N C16 C8 C 0 1 Y N N N N N 50.370 27.141 -3.607 5.895 1.811 0.979 C16 Y2N 8 Y2N C10 C9 C 0 1 Y N N N N N 52.312 28.369 -2.377 4.001 0.280 0.126 C10 Y2N 9 Y2N C17 C10 C 0 1 Y N N N N N 53.670 28.666 -2.435 3.577 -1.028 -0.080 C17 Y2N 10 Y2N C18 C11 C 0 1 Y N N N N N 54.292 29.288 -1.357 2.322 -1.269 -0.637 C18 Y2N 11 Y2N C19 C12 C 0 1 Y N N N N N 55.722 29.627 -1.420 1.864 -2.657 -0.860 C19 Y2N 12 Y2N C20 C13 C 0 1 Y N N N N N 56.706 29.108 -2.207 2.557 -3.780 -0.572 C20 Y2N 13 Y2N C22 C14 C 0 1 Y N N N N N 57.937 30.554 -1.127 0.747 -4.788 -1.383 C22 Y2N 14 Y2N C24 C15 C 0 1 Y N N N N N 53.548 29.604 -0.224 1.499 -0.196 -0.983 C24 Y2N 15 Y2N C26 C16 C 0 1 Y N N N N N 51.050 34.032 -0.028 -3.072 1.283 -0.223 C26 Y2N 16 Y2N C27 C17 C 0 1 Y N N N N N 50.860 35.405 -0.012 -4.383 0.990 0.114 C27 Y2N 17 Y2N C29 C18 C 0 1 N N N N N N 51.699 37.632 -0.396 -6.182 -0.528 0.450 C29 Y2N 18 Y2N C30 C19 C 0 1 N N N N N N 52.634 38.192 -1.436 -6.486 -2.025 0.364 C30 Y2N 19 Y2N C32 C20 C 0 1 N N N N N N 54.861 37.565 -0.572 -6.283 -2.585 2.711 C32 Y2N 20 Y2N C33 C21 C 0 1 N N N N N N 53.723 39.535 0.330 -5.560 -4.163 1.023 C33 Y2N 21 Y2N C34 C22 C 0 1 Y N N N N N 49.633 35.931 0.350 -5.252 2.010 0.476 C34 Y2N 22 Y2N C35 C23 C 0 1 Y N N N N N 48.600 35.078 0.690 -4.813 3.320 0.507 C35 Y2N 23 Y2N C6 C24 C 0 1 N N R N N N 51.374 29.702 1.070 1.033 2.254 -1.150 C6 Y2N 24 Y2N C7 C25 C 0 1 N N N N N N 52.077 29.336 2.373 1.129 2.504 -2.657 C7 Y2N 25 Y2N C8 C26 C 0 1 Y N N N N N 52.190 29.313 -0.150 1.926 1.100 -0.775 C8 Y2N 26 Y2N C9 C27 C 0 1 Y N N N N N 51.584 28.690 -1.235 3.167 1.343 -0.219 C9 Y2N 27 Y2N N13 N1 N 0 1 Y N N N N N 51.162 27.061 -5.568 7.325 0.256 1.586 N13 Y2N 28 Y2N N15 N2 N 0 1 Y N N N N N 50.077 26.726 -4.829 7.082 1.632 1.496 N15 Y2N 29 Y2N N21 N3 N 0 1 Y N N N N N 57.965 29.635 -2.041 1.926 -4.894 -0.866 N21 Y2N 30 Y2N N31 N4 N 0 1 N N N N N N 53.929 38.685 -0.874 -5.696 -2.743 1.374 N31 Y2N 31 Y2N N5 N5 N 0 1 N N N N N N 51.077 31.138 1.075 -0.352 1.936 -0.795 N5 Y2N 32 Y2N O25 O1 O 0 1 N N N N N N 49.612 31.026 -0.628 -0.876 4.088 -0.635 O25 Y2N 33 Y2N O28 O2 O 0 1 N N N N N N 51.906 36.210 -0.388 -4.818 -0.297 0.090 O28 Y2N 34 Y2N S23 S1 S 0 1 Y N N N N N 56.398 30.841 -0.414 0.314 -3.142 -1.542 S23 Y2N 35 Y2N H1B H1 H 0 1 N N N N N N 47.642 32.648 2.189 -3.097 5.478 -0.806 H1B Y2N 36 Y2N H1A H2 H 0 1 N N N N N N 46.651 33.314 0.847 -3.671 5.633 0.872 H1A Y2N 37 Y2N H1C H3 H 0 1 N N N N N N 47.662 31.853 0.578 -2.007 5.091 0.547 H1C Y2N 38 Y2N H12 H4 H 0 1 N N N N N N 53.059 28.020 -5.187 6.125 -1.466 1.041 H12 Y2N 39 Y2N H14C H5 H 0 0 N N N N N N 50.214 26.367 -7.305 9.256 -0.512 1.299 H14C Y2N 40 Y2N H14B H6 H 0 0 N N N N N N 51.303 27.777 -7.534 8.983 0.276 2.871 H14B Y2N 41 Y2N H14A H7 H 0 0 N N N N N N 51.995 26.142 -7.258 8.295 -1.334 2.551 H14A Y2N 42 Y2N H16 H8 H 0 1 N N N N N N 49.710 27.029 -2.759 5.426 2.763 0.784 H16 Y2N 43 Y2N H17 H9 H 0 1 N N N N N N 54.241 28.414 -3.316 4.219 -1.854 0.189 H17 Y2N 44 Y2N H20 H10 H 0 1 N N N N N N 56.507 28.324 -2.923 3.546 -3.763 -0.136 H20 Y2N 45 Y2N H22 H11 H 0 1 N N N N N N 58.820 31.102 -0.833 0.122 -5.621 -1.670 H22 Y2N 46 Y2N H24 H12 H 0 1 N N N N N N 54.034 30.084 0.613 0.526 -0.380 -1.415 H24 Y2N 47 Y2N H26 H13 H 0 1 N N N N N N 52.012 33.626 -0.305 -2.395 0.491 -0.505 H26 Y2N 48 Y2N H29B H14 H 0 0 N N N N N N 50.656 37.863 -0.658 -6.834 0.015 -0.234 H29B Y2N 49 Y2N H29A H15 H 0 0 N N N N N N 51.931 38.056 0.592 -6.353 -0.180 1.468 H29A Y2N 50 Y2N H30B H16 H 0 0 N N N N N N 52.852 37.402 -2.169 -7.547 -2.191 0.548 H30B Y2N 51 Y2N H30A H17 H 0 0 N N N N N N 52.132 39.031 -1.939 -6.226 -2.392 -0.628 H30A Y2N 52 Y2N H32B H18 H 0 0 N N N N N N 55.799 37.968 -0.162 -7.297 -2.984 2.712 H32B Y2N 53 Y2N H32A H19 H 0 0 N N N N N N 54.398 36.892 0.165 -5.679 -3.127 3.439 H32A Y2N 54 Y2N H32C H20 H 0 0 N N N N N N 55.075 37.007 -1.495 -6.308 -1.528 2.975 H32C Y2N 55 Y2N H33B H21 H 0 0 N N N N N N 54.697 39.875 0.710 -4.990 -4.256 0.098 H33B Y2N 56 Y2N H33C H22 H 0 0 N N N N N N 53.109 40.407 0.062 -5.039 -4.687 1.825 H33C Y2N 57 Y2N H33A H23 H 0 0 N N N N N N 53.210 38.951 1.108 -6.549 -4.600 0.886 H33A Y2N 58 Y2N H34 H24 H 0 1 N N N N N N 49.483 37.000 0.367 -6.274 1.778 0.739 H34 Y2N 59 Y2N H35 H25 H 0 1 N N N N N N 47.645 35.498 0.968 -5.495 4.109 0.790 H35 Y2N 60 Y2N H6 H26 H 0 1 N N N N N N 50.424 29.148 1.033 1.349 3.148 -0.613 H6 Y2N 61 Y2N H7C H27 H 0 1 N N N N N N 52.304 28.260 2.378 0.483 3.339 -2.928 H7C Y2N 62 Y2N H7B H28 H 0 1 N N N N N N 53.013 29.908 2.458 2.160 2.741 -2.921 H7B Y2N 63 Y2N H7A H29 H 0 1 N N N N N N 51.422 29.576 3.223 0.813 1.610 -3.194 H7A Y2N 64 Y2N H9 H30 H 0 1 N N N N N N 50.532 28.451 -1.191 3.496 2.359 -0.058 H9 Y2N 65 Y2N H5 H32 H 0 1 N N N N N N 51.534 31.725 1.743 -0.636 1.010 -0.733 H5 Y2N 66 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y2N C1 C2 SING N N 1 Y2N C2 C3 DOUB Y N 2 Y2N C3 C4 SING N N 3 Y2N C4 N5 SING N N 4 Y2N N5 C6 SING N N 5 Y2N C6 C7 SING N N 6 Y2N C6 C8 SING N N 7 Y2N C8 C9 DOUB Y N 8 Y2N C9 C10 SING Y N 9 Y2N C10 C11 SING N N 10 Y2N C11 C12 DOUB Y N 11 Y2N C12 N13 SING Y N 12 Y2N N13 C14 SING N N 13 Y2N N13 N15 SING Y N 14 Y2N N15 C16 DOUB Y N 15 Y2N C10 C17 DOUB Y N 16 Y2N C17 C18 SING Y N 17 Y2N C18 C19 SING N N 18 Y2N C19 C20 DOUB Y N 19 Y2N C20 N21 SING Y N 20 Y2N N21 C22 DOUB Y N 21 Y2N C22 S23 SING Y N 22 Y2N C18 C24 DOUB Y N 23 Y2N C4 O25 DOUB N N 24 Y2N C3 C26 SING Y N 25 Y2N C26 C27 DOUB Y N 26 Y2N C27 O28 SING N N 27 Y2N O28 C29 SING N N 28 Y2N C29 C30 SING N N 29 Y2N C30 N31 SING N N 30 Y2N N31 C32 SING N N 31 Y2N N31 C33 SING N N 32 Y2N C27 C34 SING Y N 33 Y2N C34 C35 DOUB Y N 34 Y2N C35 C2 SING Y N 35 Y2N C24 C8 SING Y N 36 Y2N C16 C11 SING Y N 37 Y2N S23 C19 SING Y N 38 Y2N C1 H1B SING N N 39 Y2N C1 H1A SING N N 40 Y2N C1 H1C SING N N 41 Y2N C12 H12 SING N N 42 Y2N C14 H14C SING N N 43 Y2N C14 H14B SING N N 44 Y2N C14 H14A SING N N 45 Y2N C16 H16 SING N N 46 Y2N C17 H17 SING N N 47 Y2N C20 H20 SING N N 48 Y2N C22 H22 SING N N 49 Y2N C24 H24 SING N N 50 Y2N C26 H26 SING N N 51 Y2N C29 H29B SING N N 52 Y2N C29 H29A SING N N 53 Y2N C30 H30B SING N N 54 Y2N C30 H30A SING N N 55 Y2N C32 H32B SING N N 56 Y2N C32 H32A SING N N 57 Y2N C32 H32C SING N N 58 Y2N C33 H33B SING N N 59 Y2N C33 H33C SING N N 60 Y2N C33 H33A SING N N 61 Y2N C34 H34 SING N N 62 Y2N C35 H35 SING N N 63 Y2N C6 H6 SING N N 64 Y2N C7 H7C SING N N 65 Y2N C7 H7B SING N N 66 Y2N C7 H7A SING N N 67 Y2N C9 H9 SING N N 68 Y2N N5 H5 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y2N SMILES ACDLabs 12.01 "CN(C)CCOc1cc(c(C)cc1)C(=O)NC(C)c1cc(cc(c1)c1cncs1)c1cn(C)nc1" Y2N InChI InChI 1.06 "InChI=1S/C27H31N5O2S/c1-18-6-7-24(34-9-8-31(3)4)13-25(18)27(33)30-19(2)20-10-21(23-14-29-32(5)16-23)12-22(11-20)26-15-28-17-35-26/h6-7,10-17,19H,8-9H2,1-5H3,(H,30,33)" Y2N InChIKey InChI 1.06 HGOCITQKFLPHLS-UHFFFAOYSA-N Y2N SMILES_CANONICAL CACTVS 3.385 "C[C@@H](NC(=O)c1cc(OCCN(C)C)ccc1C)c2cc(cc(c2)c3cnn(C)c3)c4scnc4" Y2N SMILES CACTVS 3.385 "C[CH](NC(=O)c1cc(OCCN(C)C)ccc1C)c2cc(cc(c2)c3cnn(C)c3)c4scnc4" Y2N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1C(=O)N[C@H](C)c2cc(cc(c2)c3cncs3)c4cnn(c4)C)OCCN(C)C" Y2N SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1C(=O)NC(C)c2cc(cc(c2)c3cncs3)c4cnn(c4)C)OCCN(C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Y2N "SYSTEMATIC NAME" ACDLabs 12.01 "5-[2-(dimethylamino)ethoxy]-2-methyl-N-{(1R)-1-[(3P,5M)-3-(1-methyl-1H-pyrazol-4-yl)-5-(1,3-thiazol-5-yl)phenyl]ethyl}benzamide" Y2N "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-[2-(dimethylamino)ethoxy]-2-methyl-~{N}-[(1~{R})-1-[3-(1-methylpyrazol-4-yl)-5-(1,3-thiazol-5-yl)phenyl]ethyl]benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y2N "Create component" 2023-11-14 RCSB Y2N "Initial release" 2024-04-03 RCSB #