data_Y2W # _chem_comp.id Y2W _chem_comp.name "[(1~{S},2~{R},3~{R},4~{S},6~{R})-6-azanyl-2,3,4-tris(oxidanyl)cyclohexyl]methanesulfonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H15 N O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-11-16 _chem_comp.pdbx_modified_date 2024-05-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 241.262 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y2W _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8R56 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y2W C5 C1 C 0 1 N N R N N N 14.731 5.795 55.312 -0.618 0.938 -0.412 C5 Y2W 1 Y2W C4 C2 C 0 1 N N R N N N 15.753 4.730 54.948 -2.134 0.820 -0.244 C4 Y2W 2 Y2W C3 C3 C 0 1 N N S N N N 15.723 4.439 53.454 -2.457 -0.381 0.648 C3 Y2W 3 Y2W C6 C4 C 0 1 N N S N N N 13.299 5.286 55.110 -0.076 -0.338 -1.059 C6 Y2W 4 Y2W C7 C5 C 0 1 N N N N N N 12.249 6.388 55.124 1.440 -0.221 -1.227 C7 Y2W 5 Y2W C2 C6 C 0 1 N N N N N N 14.316 4.512 52.895 -1.915 -1.657 0.001 C2 Y2W 6 Y2W C1 C7 C 0 1 N N R N N N 13.149 4.405 53.864 -0.398 -1.539 -0.167 C1 Y2W 7 Y2W N1 N1 N 0 1 N N N N N N 12.989 2.978 54.286 0.122 -2.764 -0.788 N1 Y2W 8 Y2W O1 O1 O 0 1 N N N N N N 16.263 3.126 53.238 -3.873 -0.491 0.805 O1 Y2W 9 Y2W O2 O2 O 0 1 N N N N N N 17.084 5.088 55.368 -2.641 2.012 0.360 O2 Y2W 10 Y2W O3 O3 O 0 1 N N N N N N 14.901 6.170 56.696 -0.317 2.059 -1.245 O3 Y2W 11 Y2W S1 S1 S 0 1 N N N N N N 10.545 5.957 55.444 2.198 0.167 0.375 S1 Y2W 12 Y2W O4 O4 O 0 1 N N N N N N 9.858 7.226 55.377 2.023 -0.912 1.283 O4 Y2W 13 Y2W O5 O5 O 0 1 N N N N N N 10.518 5.406 56.790 3.694 0.183 0.093 O5 Y2W 14 Y2W O6 O6 O 0 1 N N N N N N 10.214 5.000 54.422 1.899 1.503 0.757 O6 Y2W 15 Y2W H1 H1 H 0 1 N N N N N N 14.887 6.672 54.666 -0.154 1.076 0.564 H1 Y2W 16 Y2W H2 H2 H 0 1 N N N N N N 15.463 3.805 55.468 -2.599 0.682 -1.220 H2 Y2W 17 Y2W H3 H3 H 0 1 N N N N N N 16.345 5.186 52.939 -1.992 -0.243 1.625 H3 Y2W 18 Y2W H4 H4 H 0 1 N N N N N N 13.079 4.639 55.972 -0.540 -0.476 -2.036 H4 Y2W 19 Y2W H5 H5 H 0 1 N N N N N N 12.550 7.110 55.898 1.839 -1.165 -1.599 H5 Y2W 20 Y2W H6 H6 H 0 1 N N N N N N 12.279 6.874 54.138 1.666 0.574 -1.938 H6 Y2W 21 Y2W H7 H7 H 0 1 N N N N N N 14.221 5.477 52.376 -2.144 -2.512 0.637 H7 Y2W 22 Y2W H8 H8 H 0 1 N N N N N N 14.212 3.693 52.168 -2.379 -1.795 -0.975 H8 Y2W 23 Y2W H9 H9 H 0 1 N N N N N N 12.236 4.716 53.336 0.066 -1.401 0.809 H9 Y2W 24 Y2W H10 H10 H 0 1 N N N N N N 12.222 2.902 54.924 -0.078 -3.572 -0.217 H10 Y2W 25 Y2W H11 H11 H 0 1 N N N N N N 12.811 2.411 53.482 -0.244 -2.881 -1.721 H11 Y2W 26 Y2W H13 H13 H 0 1 N N N N N N 17.145 3.084 53.589 -4.150 -1.232 1.360 H13 Y2W 27 Y2W H14 H14 H 0 1 N N N N N N 17.085 5.266 56.301 -3.598 2.007 0.497 H14 Y2W 28 Y2W H15 H15 H 0 1 N N N N N N 14.263 6.836 56.925 -0.632 2.904 -0.897 H15 Y2W 29 Y2W H12 H12 H 0 1 N N N N N N 10.048 5.998 57.366 4.238 0.379 0.868 H12 Y2W 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y2W C2 C3 SING N N 1 Y2W C2 C1 SING N N 2 Y2W O1 C3 SING N N 3 Y2W C3 C4 SING N N 4 Y2W C1 N1 SING N N 5 Y2W C1 C6 SING N N 6 Y2W O6 S1 DOUB N N 7 Y2W C4 C5 SING N N 8 Y2W C4 O2 SING N N 9 Y2W C6 C7 SING N N 10 Y2W C6 C5 SING N N 11 Y2W C7 S1 SING N N 12 Y2W C5 O3 SING N N 13 Y2W O4 S1 DOUB N N 14 Y2W S1 O5 SING N N 15 Y2W C5 H1 SING N N 16 Y2W C4 H2 SING N N 17 Y2W C3 H3 SING N N 18 Y2W C6 H4 SING N N 19 Y2W C7 H5 SING N N 20 Y2W C7 H6 SING N N 21 Y2W C2 H7 SING N N 22 Y2W C2 H8 SING N N 23 Y2W C1 H9 SING N N 24 Y2W N1 H10 SING N N 25 Y2W N1 H11 SING N N 26 Y2W O1 H13 SING N N 27 Y2W O2 H14 SING N N 28 Y2W O3 H15 SING N N 29 Y2W O5 H12 SING N N 30 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y2W InChI InChI 1.06 "InChI=1S/C7H15NO6S/c8-4-1-5(9)7(11)6(10)3(4)2-15(12,13)14/h3-7,9-11H,1-2,8H2,(H,12,13,14)/t3-,4+,5-,6+,7+/m0/s1" Y2W InChIKey InChI 1.06 UVCDOBMNOOKYMK-PJEQPVAWSA-N Y2W SMILES_CANONICAL CACTVS 3.385 "N[C@@H]1C[C@H](O)[C@@H](O)[C@H](O)[C@H]1C[S](O)(=O)=O" Y2W SMILES CACTVS 3.385 "N[CH]1C[CH](O)[CH](O)[CH](O)[CH]1C[S](O)(=O)=O" Y2W SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1[C@H]([C@@H]([C@H]([C@@H]([C@H]1O)O)O)CS(=O)(=O)O)N" Y2W SMILES "OpenEye OEToolkits" 2.0.7 "C1C(C(C(C(C1O)O)O)CS(=O)(=O)O)N" # _pdbx_chem_comp_identifier.comp_id Y2W _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(1~{S},2~{R},3~{R},4~{S},6~{R})-6-azanyl-2,3,4-tris(oxidanyl)cyclohexyl]methanesulfonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y2W "Create component" 2023-11-16 PDBE Y2W "Initial release" 2024-05-08 RCSB #