data_Y38 # _chem_comp.id Y38 _chem_comp.name "N-[2-(benzoylamino)ethyl]-N-(biphenyl-4-ylsulfonyl)-D-valine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H28 N2 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-09-25 _chem_comp.pdbx_modified_date 2013-04-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 480.576 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y38 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4H84 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y38 O15 O15 O 0 1 N N N -6.221 -0.447 9.189 0.124 -1.032 -2.319 O15 Y38 1 Y38 S13 S13 S 0 1 N N N -7.011 0.599 8.519 -0.599 -1.622 -1.247 S13 Y38 2 Y38 O14 O14 O 0 1 N N N -6.639 2.018 8.580 -1.160 -2.926 -1.313 O14 Y38 3 Y38 N16 N16 N 0 1 N N N -8.108 0.124 7.578 0.417 -1.615 0.061 N16 Y38 4 Y38 C17 C17 C 0 1 N N R -8.524 -1.283 7.584 0.553 -2.817 0.888 C17 Y38 5 Y38 C18 C18 C 0 1 N N N -8.525 -1.976 6.212 0.920 -4.008 0.001 C18 Y38 6 Y38 C19 C19 C 0 1 N N N -9.172 -3.356 6.293 2.220 -3.705 -0.747 C19 Y38 7 Y38 C20 C20 C 0 1 N N N -7.111 -2.119 5.644 1.111 -5.252 0.871 C20 Y38 8 Y38 C21 C21 C 0 1 N N N -9.893 -1.395 8.185 -0.752 -3.095 1.589 C21 Y38 9 Y38 O22 O22 O 0 1 N N N -10.833 -0.742 7.695 -1.792 -2.733 1.094 O22 Y38 10 Y38 O23 O23 O 0 1 N N N -10.057 -2.137 9.168 -0.757 -3.746 2.763 O23 Y38 11 Y38 C24 C24 C 0 1 N N N -8.792 1.102 6.717 1.178 -0.408 0.391 C24 Y38 12 Y38 C25 C25 C 0 1 N N N -8.078 1.340 5.383 2.573 -0.500 -0.231 C25 Y38 13 Y38 N26 N26 N 0 1 N N N -8.694 2.452 4.642 3.356 0.679 0.149 N26 Y38 14 Y38 C27 C27 C 0 1 N N N -9.914 2.357 4.124 4.624 0.815 -0.286 C27 Y38 15 Y38 O28 O28 O 0 1 N N N -10.527 1.297 4.120 5.119 -0.040 -0.994 O28 Y38 16 Y38 C29 C29 C 0 1 Y N N -10.567 3.545 3.482 5.413 2.005 0.097 C29 Y38 17 Y38 C34 C34 C 0 1 Y N N -9.858 4.731 3.314 6.727 2.149 -0.352 C34 Y38 18 Y38 C31 C31 C 0 1 Y N N -10.484 5.821 2.706 7.458 3.262 0.010 C31 Y38 19 Y38 C32 C32 C 0 1 Y N N -11.802 5.707 2.263 6.892 4.234 0.816 C32 Y38 20 Y38 C3B C3B C 0 1 Y N N -11.874 3.435 3.043 4.846 2.992 0.906 C3B Y38 21 Y38 C33 C33 C 0 1 Y N N -12.497 4.515 2.418 5.590 4.097 1.265 C33 Y38 22 Y38 C10 C10 C 0 1 Y N N -7.947 0.919 9.813 -1.929 -0.526 -0.881 C10 Y38 23 Y38 C11 C11 C 0 1 Y N N -8.182 0.004 10.862 -3.124 -1.030 -0.399 C11 Y38 24 Y38 C12 C12 C 0 1 Y N N -8.992 0.308 11.975 -4.168 -0.176 -0.109 C12 Y38 25 Y38 C7 C7 C 0 1 Y N N -9.621 1.562 12.090 -4.018 1.196 -0.304 C7 Y38 26 Y38 C8 C8 C 0 1 Y N N -9.397 2.466 11.063 -2.812 1.698 -0.790 C8 Y38 27 Y38 C9 C9 C 0 1 Y N N -8.596 2.156 9.957 -1.772 0.835 -1.071 C9 Y38 28 Y38 C1 C1 C 0 1 Y N N -10.476 1.930 13.271 -5.138 2.119 0.005 C1 Y38 29 Y38 C2 C2 C 0 1 Y N N -11.598 2.745 13.143 -6.342 1.618 0.495 C2 Y38 30 Y38 C3 C3 C 0 1 Y N N -12.368 3.103 14.253 -7.381 2.481 0.781 C3 Y38 31 Y38 C4 C4 C 0 1 Y N N -12.008 2.648 15.519 -7.228 3.841 0.581 C4 Y38 32 Y38 C5 C5 C 0 1 Y N N -10.881 1.843 15.659 -6.035 4.344 0.094 C5 Y38 33 Y38 C6 C6 C 0 1 Y N N -10.119 1.493 14.546 -4.988 3.491 -0.190 C6 Y38 34 Y38 H1 H1 H 0 1 N N N -7.830 -1.841 8.230 1.337 -2.660 1.629 H1 Y38 35 Y38 H2 H2 H 0 1 N N N -9.114 -1.359 5.517 0.120 -4.186 -0.717 H2 Y38 36 Y38 H3 H3 H 0 1 N N N -10.189 -3.261 6.701 3.020 -3.527 -0.029 H3 Y38 37 Y38 H4 H4 H 0 1 N N N -9.220 -3.798 5.287 2.481 -4.554 -1.379 H4 Y38 38 Y38 H5 H5 H 0 1 N N N -8.573 -4.004 6.950 2.084 -2.819 -1.367 H5 Y38 39 Y38 H6 H6 H 0 1 N N N -6.638 -1.128 5.583 0.185 -5.468 1.405 H6 Y38 40 Y38 H7 H7 H 0 1 N N N -6.516 -2.769 6.302 1.372 -6.101 0.239 H7 Y38 41 Y38 H8 H8 H 0 1 N N N -7.163 -2.563 4.639 1.911 -5.074 1.590 H8 Y38 42 Y38 H9 H9 H 0 1 N N N -10.966 -2.104 9.442 -1.619 -3.901 3.174 H9 Y38 43 Y38 H10 H10 H 0 1 N N N -8.853 2.059 7.256 0.661 0.467 -0.004 H10 Y38 44 Y38 H11 H11 H 0 1 N N N -9.807 0.733 6.509 1.268 -0.320 1.474 H11 Y38 45 Y38 H12 H12 H 0 1 N N N -8.140 0.426 4.775 3.073 -1.399 0.128 H12 Y38 46 Y38 H13 H13 H 0 1 N N N -7.022 1.580 5.579 2.485 -0.543 -1.317 H13 Y38 47 Y38 H14 H14 H 0 1 N N N -8.181 3.302 4.525 2.961 1.362 0.714 H14 Y38 48 Y38 H15 H15 H 0 1 N N N -8.835 4.807 3.650 7.170 1.391 -0.980 H15 Y38 49 Y38 H16 H16 H 0 1 N N N -9.949 6.751 2.579 8.474 3.375 -0.337 H16 Y38 50 Y38 H17 H17 H 0 1 N N N -12.285 6.552 1.796 7.470 5.100 1.100 H17 Y38 51 Y38 H18 H18 H 0 1 N N N -12.414 2.510 3.185 3.829 2.888 1.253 H18 Y38 52 Y38 H19 H19 H 0 1 N N N -13.511 4.425 2.058 5.154 4.859 1.894 H19 Y38 53 Y38 H20 H20 H 0 1 N N N -7.721 -0.971 10.810 -3.239 -2.093 -0.249 H20 Y38 54 Y38 H21 H21 H 0 1 N N N -9.132 -0.431 12.750 -5.101 -0.570 0.266 H21 Y38 55 Y38 H22 H22 H 0 1 N N N -9.856 3.442 11.118 -2.691 2.760 -0.943 H22 Y38 56 Y38 H23 H23 H 0 1 N N N -8.472 2.899 9.183 -0.836 1.223 -1.443 H23 Y38 57 Y38 H24 H24 H 0 1 N N N -11.879 3.108 12.165 -6.463 0.556 0.652 H24 Y38 58 Y38 H25 H25 H 0 1 N N N -13.239 3.730 14.129 -8.314 2.094 1.162 H25 Y38 59 Y38 H26 H26 H 0 1 N N N -12.597 2.917 16.383 -8.043 4.513 0.806 H26 Y38 60 Y38 H27 H27 H 0 1 N N N -10.595 1.487 16.638 -5.921 5.407 -0.062 H27 Y38 61 Y38 H28 H28 H 0 1 N N N -9.242 0.876 14.672 -4.056 3.885 -0.566 H28 Y38 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y38 C32 C33 DOUB Y N 1 Y38 C32 C31 SING Y N 2 Y38 C33 C3B SING Y N 3 Y38 C31 C34 DOUB Y N 4 Y38 C3B C29 DOUB Y N 5 Y38 C34 C29 SING Y N 6 Y38 C29 C27 SING N N 7 Y38 O28 C27 DOUB N N 8 Y38 C27 N26 SING N N 9 Y38 N26 C25 SING N N 10 Y38 C25 C24 SING N N 11 Y38 C20 C18 SING N N 12 Y38 C18 C19 SING N N 13 Y38 C18 C17 SING N N 14 Y38 C24 N16 SING N N 15 Y38 N16 C17 SING N N 16 Y38 N16 S13 SING N N 17 Y38 C17 C21 SING N N 18 Y38 O22 C21 DOUB N N 19 Y38 C21 O23 SING N N 20 Y38 S13 O14 DOUB N N 21 Y38 S13 O15 DOUB N N 22 Y38 S13 C10 SING N N 23 Y38 C10 C9 DOUB Y N 24 Y38 C10 C11 SING Y N 25 Y38 C9 C8 SING Y N 26 Y38 C11 C12 DOUB Y N 27 Y38 C8 C7 DOUB Y N 28 Y38 C12 C7 SING Y N 29 Y38 C7 C1 SING N N 30 Y38 C2 C1 DOUB Y N 31 Y38 C2 C3 SING Y N 32 Y38 C1 C6 SING Y N 33 Y38 C3 C4 DOUB Y N 34 Y38 C6 C5 DOUB Y N 35 Y38 C4 C5 SING Y N 36 Y38 C17 H1 SING N N 37 Y38 C18 H2 SING N N 38 Y38 C19 H3 SING N N 39 Y38 C19 H4 SING N N 40 Y38 C19 H5 SING N N 41 Y38 C20 H6 SING N N 42 Y38 C20 H7 SING N N 43 Y38 C20 H8 SING N N 44 Y38 O23 H9 SING N N 45 Y38 C24 H10 SING N N 46 Y38 C24 H11 SING N N 47 Y38 C25 H12 SING N N 48 Y38 C25 H13 SING N N 49 Y38 N26 H14 SING N N 50 Y38 C34 H15 SING N N 51 Y38 C31 H16 SING N N 52 Y38 C32 H17 SING N N 53 Y38 C3B H18 SING N N 54 Y38 C33 H19 SING N N 55 Y38 C11 H20 SING N N 56 Y38 C12 H21 SING N N 57 Y38 C8 H22 SING N N 58 Y38 C9 H23 SING N N 59 Y38 C2 H24 SING N N 60 Y38 C3 H25 SING N N 61 Y38 C4 H26 SING N N 62 Y38 C5 H27 SING N N 63 Y38 C6 H28 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y38 SMILES ACDLabs 12.01 "O=S(=O)(N(C(C(=O)O)C(C)C)CCNC(=O)c1ccccc1)c3ccc(c2ccccc2)cc3" Y38 InChI InChI 1.03 "InChI=1S/C26H28N2O5S/c1-19(2)24(26(30)31)28(18-17-27-25(29)22-11-7-4-8-12-22)34(32,33)23-15-13-21(14-16-23)20-9-5-3-6-10-20/h3-16,19,24H,17-18H2,1-2H3,(H,27,29)(H,30,31)/t24-/m1/s1" Y38 InChIKey InChI 1.03 BKYHPXRQAHYJBN-XMMPIXPASA-N Y38 SMILES_CANONICAL CACTVS 3.370 "CC(C)[C@@H](N(CCNC(=O)c1ccccc1)[S](=O)(=O)c2ccc(cc2)c3ccccc3)C(O)=O" Y38 SMILES CACTVS 3.370 "CC(C)[CH](N(CCNC(=O)c1ccccc1)[S](=O)(=O)c2ccc(cc2)c3ccccc3)C(O)=O" Y38 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)[C@H](C(=O)O)N(CCNC(=O)c1ccccc1)S(=O)(=O)c2ccc(cc2)c3ccccc3" Y38 SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)C(C(=O)O)N(CCNC(=O)c1ccccc1)S(=O)(=O)c2ccc(cc2)c3ccccc3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Y38 "SYSTEMATIC NAME" ACDLabs 12.01 "N-[2-(benzoylamino)ethyl]-N-(biphenyl-4-ylsulfonyl)-D-valine" Y38 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2R)-2-[2-benzamidoethyl-(4-phenylphenyl)sulfonyl-amino]-3-methyl-butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y38 "Create component" 2012-09-25 RCSB Y38 "Initial release" 2013-04-24 RCSB #