data_Y3T # _chem_comp.id Y3T _chem_comp.name "N-(3-chloro-4-fluorophenyl)-3-[4-(dimethylamino)butanamido]-4-methoxybenzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H23 Cl F N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-01-03 _chem_comp.pdbx_modified_date 2024-02-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 407.866 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y3T _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8FMU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y3T C02 C1 C 0 1 N N N N N N 10.725 15.981 1.032 1.647 -0.850 0.063 C02 Y3T 1 Y3T C03 C2 C 0 1 Y N N N N N 12.206 15.868 1.392 0.473 -1.743 0.109 C03 Y3T 2 Y3T C04 C3 C 0 1 Y N N N N N 13.170 15.573 0.436 -0.797 -1.217 0.358 C04 Y3T 3 Y3T C05 C4 C 0 1 Y N N N N N 14.509 15.494 0.811 -1.893 -2.058 0.400 C05 Y3T 4 Y3T C06 C5 C 0 1 Y N N N N N 14.869 15.712 2.134 -1.729 -3.429 0.193 C06 Y3T 5 Y3T C07 C6 C 0 1 Y N N N N N 13.907 16.009 3.084 -0.467 -3.949 -0.054 C07 Y3T 6 Y3T C12 C7 C 0 1 Y N N N N N 8.828 15.677 -0.605 3.968 -0.500 -0.327 C12 Y3T 7 Y3T C13 C8 C 0 1 Y N N N N N 8.137 16.859 -0.367 4.049 0.656 0.440 C13 Y3T 8 Y3T C14 C9 C 0 1 Y N N N N N 6.799 16.969 -0.701 5.134 1.500 0.301 C14 Y3T 9 Y3T C15 C10 C 0 1 Y N N N N N 6.147 15.898 -1.285 6.141 1.194 -0.601 C15 Y3T 10 Y3T C16 C11 C 0 1 Y N N N N N 6.830 14.719 -1.530 6.061 0.043 -1.365 C16 Y3T 11 Y3T C17 C12 C 0 1 Y N N N N N 8.171 14.609 -1.191 4.981 -0.807 -1.226 C17 Y3T 12 Y3T C20 C13 C 0 1 N N N N N N 16.579 16.437 3.591 -2.566 -5.646 0.015 C20 Y3T 13 Y3T C21 C14 C 0 1 N N N N N N 15.478 14.857 -1.529 -3.501 -0.315 0.183 C21 Y3T 14 Y3T C22 C15 C 0 1 N N N N N N 16.771 14.561 -2.288 -4.904 0.205 0.363 C22 Y3T 15 Y3T C24 C16 C 0 1 N N N N N N 17.685 12.868 -3.939 -6.437 2.130 -0.070 C24 Y3T 16 Y3T C27 C17 C 0 1 N N N N N N 18.723 10.808 -3.386 -7.942 3.913 -0.719 C27 Y3T 17 Y3T O25 O1 O 0 1 N N N N N N 14.438 14.821 -2.097 -2.670 0.364 -0.382 O25 Y3T 18 Y3T C08 C18 C 0 1 Y N N N N N 12.577 16.085 2.711 0.629 -3.115 -0.103 C08 Y3T 19 Y3T C23 C19 C 0 1 N N N N N N 16.534 13.815 -3.597 -5.013 1.602 -0.253 C23 Y3T 20 Y3T C28 C20 C 0 1 N N N N N N 16.396 10.879 -3.824 -5.714 4.436 0.074 C28 Y3T 21 Y3T F18 F1 F 0 1 N N N N N N 4.830 16.009 -1.615 7.201 2.021 -0.735 F18 Y3T 22 Y3T N01 N1 N 0 1 N N N N N N 15.589 15.182 -0.115 -3.169 -1.535 0.650 N01 Y3T 23 Y3T N11 N2 N 0 1 N N N N N N 10.226 15.556 -0.262 2.871 -1.357 -0.188 N11 Y3T 24 Y3T N26 N3 N 0 1 N N N N N N 17.515 11.600 -3.253 -6.542 3.470 -0.661 N26 Y3T 25 Y3T O09 O2 O 0 1 N N N N N N 16.221 15.629 2.501 -2.806 -4.254 0.235 O09 Y3T 26 Y3T O10 O3 O 0 1 N N N N N N 9.987 16.441 1.838 1.510 0.344 0.247 O10 Y3T 27 Y3T CL19 CL1 CL 0 0 N N N N N N 5.907 18.483 -0.390 5.236 2.945 1.258 CL19 Y3T 28 Y3T H1 H1 H 0 1 N N N N N N 12.883 15.406 -0.592 -0.922 -0.156 0.518 H1 Y3T 29 Y3T H2 H2 H 0 1 N N N N N N 14.193 16.181 4.111 -0.343 -5.010 -0.213 H2 Y3T 30 Y3T H3 H3 H 0 1 N N N N N N 8.648 17.698 0.082 3.265 0.894 1.143 H3 Y3T 31 Y3T H4 H4 H 0 1 N N N N N N 6.319 13.884 -1.985 6.846 -0.193 -2.068 H4 Y3T 32 Y3T H5 H5 H 0 1 N N N N N N 8.703 13.689 -1.385 4.919 -1.705 -1.823 H5 Y3T 33 Y3T H6 H6 H 0 1 N N N N N N 17.650 16.309 3.807 -3.508 -6.191 0.075 H6 Y3T 34 Y3T H7 H7 H 0 1 N N N N N N 16.378 17.491 3.348 -2.127 -5.787 -0.972 H7 Y3T 35 Y3T H8 H8 H 0 1 N N N N N N 15.990 16.145 4.473 -1.880 -6.021 0.775 H8 Y3T 36 Y3T H9 H9 H 0 1 N N N N N N 17.421 13.947 -1.647 -5.606 -0.466 -0.132 H9 Y3T 37 Y3T H10 H10 H 0 1 N N N N N N 17.272 15.514 -2.513 -5.138 0.257 1.426 H10 Y3T 38 Y3T H11 H11 H 0 1 N N N N N N 17.701 12.694 -5.025 -7.140 1.459 -0.565 H11 Y3T 39 Y3T H12 H12 H 0 1 N N N N N N 18.636 13.325 -3.627 -6.672 2.182 0.993 H12 Y3T 40 Y3T H13 H13 H 0 1 N N N N N N 18.592 9.848 -2.865 -8.355 3.942 0.289 H13 Y3T 41 Y3T H14 H14 H 0 1 N N N N N N 18.924 10.623 -4.451 -7.990 4.908 -1.161 H14 Y3T 42 Y3T H15 H15 H 0 1 N N N N N N 19.569 11.353 -2.942 -8.518 3.216 -1.328 H15 Y3T 43 Y3T H16 H16 H 0 1 N N N N N N 11.824 16.314 3.450 1.610 -3.523 -0.300 H16 Y3T 44 Y3T H17 H17 H 0 1 N N N N N N 16.426 14.549 -4.409 -4.310 2.273 0.242 H17 Y3T 45 Y3T H18 H18 H 0 1 N N N N N N 15.608 13.229 -3.508 -4.778 1.549 -1.316 H18 Y3T 46 Y3T H19 H19 H 0 1 N N N N N N 16.272 9.919 -3.301 -4.672 4.120 0.041 H19 Y3T 47 Y3T H20 H20 H 0 1 N N N N N N 15.480 11.478 -3.714 -5.810 5.420 -0.385 H20 Y3T 48 Y3T H21 H21 H 0 1 N N N N N N 16.586 10.692 -4.891 -6.047 4.484 1.111 H21 Y3T 49 Y3T H22 H22 H 0 1 N N N N N N 16.514 15.192 0.265 -3.814 -2.051 1.159 H22 Y3T 50 Y3T H23 H23 H 0 1 N N N N N N 10.863 15.171 -0.930 2.990 -2.316 -0.273 H23 Y3T 51 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y3T C24 C23 SING N N 1 Y3T C24 N26 SING N N 2 Y3T C28 N26 SING N N 3 Y3T C23 C22 SING N N 4 Y3T C27 N26 SING N N 5 Y3T C22 C21 SING N N 6 Y3T O25 C21 DOUB N N 7 Y3T F18 C15 SING N N 8 Y3T C16 C15 DOUB Y N 9 Y3T C16 C17 SING Y N 10 Y3T C21 N01 SING N N 11 Y3T C15 C14 SING Y N 12 Y3T C17 C12 DOUB Y N 13 Y3T C14 CL19 SING N N 14 Y3T C14 C13 DOUB Y N 15 Y3T C12 C13 SING Y N 16 Y3T C12 N11 SING N N 17 Y3T N11 C02 SING N N 18 Y3T N01 C05 SING N N 19 Y3T C04 C05 DOUB Y N 20 Y3T C04 C03 SING Y N 21 Y3T C05 C06 SING Y N 22 Y3T C02 C03 SING N N 23 Y3T C02 O10 DOUB N N 24 Y3T C03 C08 DOUB Y N 25 Y3T C06 O09 SING N N 26 Y3T C06 C07 DOUB Y N 27 Y3T O09 C20 SING N N 28 Y3T C08 C07 SING Y N 29 Y3T C04 H1 SING N N 30 Y3T C07 H2 SING N N 31 Y3T C13 H3 SING N N 32 Y3T C16 H4 SING N N 33 Y3T C17 H5 SING N N 34 Y3T C20 H6 SING N N 35 Y3T C20 H7 SING N N 36 Y3T C20 H8 SING N N 37 Y3T C22 H9 SING N N 38 Y3T C22 H10 SING N N 39 Y3T C24 H11 SING N N 40 Y3T C24 H12 SING N N 41 Y3T C27 H13 SING N N 42 Y3T C27 H14 SING N N 43 Y3T C27 H15 SING N N 44 Y3T C08 H16 SING N N 45 Y3T C23 H17 SING N N 46 Y3T C23 H18 SING N N 47 Y3T C28 H19 SING N N 48 Y3T C28 H20 SING N N 49 Y3T C28 H21 SING N N 50 Y3T N01 H22 SING N N 51 Y3T N11 H23 SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y3T SMILES ACDLabs 12.01 "Fc1ccc(NC(=O)c2ccc(OC)c(NC(=O)CCCN(C)C)c2)cc1Cl" Y3T InChI InChI 1.06 "InChI=1S/C20H23ClFN3O3/c1-25(2)10-4-5-19(26)24-17-11-13(6-9-18(17)28-3)20(27)23-14-7-8-16(22)15(21)12-14/h6-9,11-12H,4-5,10H2,1-3H3,(H,23,27)(H,24,26)" Y3T InChIKey InChI 1.06 VFCRGORDSAIMRG-UHFFFAOYSA-N Y3T SMILES_CANONICAL CACTVS 3.385 "COc1ccc(cc1NC(=O)CCCN(C)C)C(=O)Nc2ccc(F)c(Cl)c2" Y3T SMILES CACTVS 3.385 "COc1ccc(cc1NC(=O)CCCN(C)C)C(=O)Nc2ccc(F)c(Cl)c2" Y3T SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(C)CCCC(=O)Nc1cc(ccc1OC)C(=O)Nc2ccc(c(c2)Cl)F" Y3T SMILES "OpenEye OEToolkits" 2.0.7 "CN(C)CCCC(=O)Nc1cc(ccc1OC)C(=O)Nc2ccc(c(c2)Cl)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Y3T "SYSTEMATIC NAME" ACDLabs 12.01 "N-(3-chloro-4-fluorophenyl)-3-[4-(dimethylamino)butanamido]-4-methoxybenzamide" Y3T "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-(3-chloranyl-4-fluoranyl-phenyl)-3-[4-(dimethylamino)butanoylamino]-4-methoxy-benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y3T "Create component" 2023-01-03 RCSB Y3T "Initial release" 2024-02-28 RCSB #