data_Y49 # _chem_comp.id Y49 _chem_comp.name "4-(6-aminocarbonyl-8-oxidanylidene-9-phenyl-7H-purin-2-yl)benzoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H13 N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-04-08 _chem_comp.pdbx_modified_date 2021-04-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 375.338 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y49 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7BU4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y49 C01 C1 C 0 1 Y N N 0.660 8.472 -24.508 0.653 -0.739 -0.007 C01 Y49 1 Y49 N02 N1 N 0 1 Y N N 0.424 7.902 -25.760 0.437 -2.044 -0.005 N02 Y49 2 Y49 N03 N2 N 0 1 Y N N 1.068 9.771 -24.348 -0.340 0.143 -0.006 N03 Y49 3 Y49 C04 C2 C 0 1 Y N N 0.646 8.625 -26.884 -0.803 -2.534 -0.001 C04 Y49 4 Y49 C05 C3 C 0 1 Y N N 1.295 10.499 -25.484 -1.598 -0.259 -0.008 C05 Y49 5 Y49 C06 C4 C 0 1 Y N N 1.102 9.974 -26.814 -1.874 -1.639 0.001 C06 Y49 6 Y49 N07 N3 N 0 1 N N N 1.743 11.853 -25.630 -2.821 0.389 -0.007 N07 Y49 7 Y49 C08 C5 C 0 1 N N N 1.788 12.040 -27.055 -3.795 -0.541 -0.009 C08 Y49 8 Y49 N09 N4 N 0 1 N N N 1.416 10.956 -27.791 -3.250 -1.773 0.004 N09 Y49 9 Y49 C10 C6 C 0 1 Y N N 2.077 12.818 -24.578 -3.013 1.777 -0.003 C10 Y49 10 Y49 C11 C7 C 0 1 Y N N 2.315 12.384 -23.263 -4.299 2.301 -0.002 C11 Y49 11 Y49 C12 C8 C 0 1 Y N N 2.161 14.193 -24.843 -1.918 2.630 0.006 C12 Y49 12 Y49 C13 C9 C 0 1 Y N N 2.635 13.301 -22.252 -4.485 3.670 0.002 C13 Y49 13 Y49 C14 C10 C 0 1 Y N N 2.481 15.102 -23.825 -2.111 3.998 0.010 C14 Y49 14 Y49 C15 C11 C 0 1 Y N N 2.720 14.666 -22.521 -3.392 4.517 0.005 C15 Y49 15 Y49 C16 C12 C 0 1 Y N N 0.364 7.660 -23.254 2.051 -0.244 -0.005 C16 Y49 16 Y49 C17 C13 C 0 1 Y N N -0.417 6.482 -23.279 2.305 1.127 0.004 C17 Y49 17 Y49 C18 C14 C 0 1 Y N N 0.768 8.063 -21.974 3.111 -1.151 -0.006 C18 Y49 18 Y49 C19 C15 C 0 1 Y N N -0.743 5.741 -22.114 3.603 1.588 0.006 C19 Y49 19 Y49 C20 C16 C 0 1 Y N N 0.451 7.327 -20.817 4.410 -0.692 -0.004 C20 Y49 20 Y49 C21 C17 C 0 1 Y N N -0.316 6.158 -20.860 4.665 0.681 -0.001 C21 Y49 21 Y49 O22 O1 O 0 1 N N N 2.183 13.243 -27.554 -4.988 -0.304 -0.009 O22 Y49 22 Y49 C23 C18 C 0 1 N N N 0.398 7.909 -28.202 -1.039 -3.997 0.007 C23 Y49 23 Y49 O24 O2 O 0 1 N N N 0.541 8.499 -29.263 -2.174 -4.429 0.015 O24 Y49 24 Y49 N25 N5 N 0 1 N N N 0.020 6.530 -28.237 0.007 -4.847 0.005 N25 Y49 25 Y49 C26 C19 C 0 1 N N N -0.608 5.381 -19.558 6.057 1.174 0.000 C26 Y49 26 Y49 O27 O3 O 0 1 N N N 0.173 5.663 -18.614 7.082 0.299 -0.006 O27 Y49 27 Y49 O28 O4 O 0 1 N N N -1.560 4.555 -19.502 6.279 2.368 0.007 O28 Y49 28 Y49 H1 H1 H 0 1 N N N 1.374 10.871 -28.787 -3.739 -2.611 0.005 H1 Y49 29 Y49 H2 H2 H 0 1 N N N 2.251 11.332 -23.028 -5.152 1.640 -0.005 H2 Y49 30 Y49 H3 H3 H 0 1 N N N 1.977 14.556 -25.843 -0.917 2.225 0.010 H3 Y49 31 Y49 H4 H4 H 0 1 N N N 2.818 12.944 -21.249 -5.484 4.078 0.002 H4 Y49 32 Y49 H5 H5 H 0 1 N N N 2.544 16.156 -24.053 -1.259 4.663 0.017 H5 Y49 33 Y49 H6 H6 H 0 1 N N N 2.965 15.369 -21.739 -3.540 5.587 0.007 H6 Y49 34 Y49 H7 H7 H 0 1 N N N -0.783 6.129 -24.232 1.483 1.828 0.010 H7 Y49 35 Y49 H8 H8 H 0 1 N N N 1.343 8.971 -21.872 2.914 -2.213 -0.008 H8 Y49 36 Y49 H9 H9 H 0 1 N N N -1.332 4.840 -22.204 3.799 2.650 0.012 H9 Y49 37 Y49 H10 H10 H 0 1 N N N 0.813 7.677 -19.862 5.230 -1.395 -0.004 H10 Y49 38 Y49 H11 H11 H 0 1 N N N -0.121 6.072 -29.115 0.913 -4.502 -0.001 H11 Y49 39 Y49 H12 H12 H 0 1 N N N -0.104 6.024 -27.384 -0.148 -5.805 0.011 H12 Y49 40 Y49 H13 H13 H 0 1 N N N -0.063 5.157 -17.845 7.975 0.669 -0.005 H13 Y49 41 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y49 O24 C23 DOUB N N 1 Y49 N25 C23 SING N N 2 Y49 C23 C04 SING N N 3 Y49 N09 C08 SING N N 4 Y49 N09 C06 SING N N 5 Y49 O22 C08 DOUB N N 6 Y49 C08 N07 SING N N 7 Y49 C04 C06 DOUB Y N 8 Y49 C04 N02 SING Y N 9 Y49 C06 C05 SING Y N 10 Y49 N02 C01 DOUB Y N 11 Y49 N07 C05 SING N N 12 Y49 N07 C10 SING N N 13 Y49 C05 N03 DOUB Y N 14 Y49 C12 C10 DOUB Y N 15 Y49 C12 C14 SING Y N 16 Y49 C10 C11 SING Y N 17 Y49 C01 N03 SING Y N 18 Y49 C01 C16 SING N N 19 Y49 C14 C15 DOUB Y N 20 Y49 C17 C16 DOUB Y N 21 Y49 C17 C19 SING Y N 22 Y49 C11 C13 DOUB Y N 23 Y49 C16 C18 SING Y N 24 Y49 C15 C13 SING Y N 25 Y49 C19 C21 DOUB Y N 26 Y49 C18 C20 DOUB Y N 27 Y49 C21 C20 SING Y N 28 Y49 C21 C26 SING N N 29 Y49 C26 O28 DOUB N N 30 Y49 C26 O27 SING N N 31 Y49 N09 H1 SING N N 32 Y49 C11 H2 SING N N 33 Y49 C12 H3 SING N N 34 Y49 C13 H4 SING N N 35 Y49 C14 H5 SING N N 36 Y49 C15 H6 SING N N 37 Y49 C17 H7 SING N N 38 Y49 C18 H8 SING N N 39 Y49 C19 H9 SING N N 40 Y49 C20 H10 SING N N 41 Y49 N25 H11 SING N N 42 Y49 N25 H12 SING N N 43 Y49 O27 H13 SING N N 44 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y49 InChI InChI 1.03 "InChI=1S/C19H13N5O4/c20-15(25)13-14-17(24(19(28)22-14)12-4-2-1-3-5-12)23-16(21-13)10-6-8-11(9-7-10)18(26)27/h1-9H,(H2,20,25)(H,22,28)(H,26,27)" Y49 InChIKey InChI 1.03 ZIQWXRLSVVVXBM-UHFFFAOYSA-N Y49 SMILES_CANONICAL CACTVS 3.385 "NC(=O)c1nc(nc2N(C(=O)Nc12)c3ccccc3)c4ccc(cc4)C(O)=O" Y49 SMILES CACTVS 3.385 "NC(=O)c1nc(nc2N(C(=O)Nc12)c3ccccc3)c4ccc(cc4)C(O)=O" Y49 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)N2c3c(c(nc(n3)c4ccc(cc4)C(=O)O)C(=O)N)NC2=O" Y49 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)N2c3c(c(nc(n3)c4ccc(cc4)C(=O)O)C(=O)N)NC2=O" # _pdbx_chem_comp_identifier.comp_id Y49 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-(6-aminocarbonyl-8-oxidanylidene-9-phenyl-7~{H}-purin-2-yl)benzoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y49 "Create component" 2020-04-08 PDBJ Y49 "Initial release" 2021-04-07 RCSB ##