data_Y4C # _chem_comp.id Y4C _chem_comp.name "N~1~-(4-butylphenyl)-N~2~-{2-[4-(4-methylbenzene-1-sulfonyl)piperazin-1-yl]ethyl}ethanediamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H34 N4 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-11 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 486.627 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y4C _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G4X _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y4C C10 C1 C 0 1 N N N N N N 16.680 12.950 -45.507 4.328 1.710 0.932 C10 Y4C 1 Y4C C11 C2 C 0 1 N N N N N N 14.255 13.385 -45.635 4.889 1.663 -1.529 C11 Y4C 2 Y4C O12 O1 O 0 1 N N N N N N 12.744 7.812 -46.817 -3.743 0.378 -0.914 O12 Y4C 3 Y4C C15 C3 C 0 1 N N N N N N 14.309 13.092 -47.175 3.529 1.001 -1.775 C15 Y4C 4 Y4C C16 C4 C 0 1 N N N N N N 16.717 12.606 -47.037 2.990 1.047 0.589 C16 Y4C 5 Y4C C19 C5 C 0 1 Y N N N N N 13.387 5.522 -45.199 -5.896 1.156 0.440 C19 Y4C 6 Y4C C23 C6 C 0 1 Y N N N N N 11.577 3.951 -43.738 -8.430 0.134 0.005 C23 Y4C 7 Y4C C24 C7 C 0 1 Y N N N N N 13.487 4.113 -45.250 -6.788 1.035 1.497 C24 Y4C 8 Y4C C25 C8 C 0 1 Y N N N N N 12.394 6.143 -44.395 -6.278 0.762 -0.836 C25 Y4C 9 Y4C C26 C9 C 0 1 N N N N N N 15.560 10.088 -48.995 0.217 1.679 -0.131 C26 Y4C 10 Y4C C27 C10 C 0 1 Y N N N N N 12.579 3.335 -44.517 -8.053 0.525 1.277 C27 Y4C 11 Y4C C28 C11 C 0 1 Y N N N N N 11.498 5.351 -43.672 -7.544 0.252 -1.049 C28 Y4C 12 Y4C N2 N1 N 0 1 N N N N N N 15.576 13.884 -45.168 5.290 1.403 -0.138 N2 Y4C 13 Y4C C3 C12 C 0 1 N N N N N N 13.888 7.391 -46.779 -3.567 1.200 -0.039 C3 Y4C 14 Y4C C4 C13 C 0 1 N N N N N N 14.980 8.093 -47.600 -2.187 1.683 0.266 C4 Y4C 15 Y4C N6 N2 N 0 1 N N N N N N 14.289 6.293 -46.015 -4.618 1.677 0.658 N6 Y4C 16 Y4C N9 N3 N 0 1 N N N N N N 15.373 12.056 -47.439 2.574 1.460 -0.758 N9 Y4C 17 Y4C O13 O2 O 0 1 N N N N N N 16.095 7.591 -47.732 -2.012 2.504 1.142 O13 Y4C 18 Y4C N14 N4 N 0 1 N N N N N N 14.600 9.304 -48.176 -1.137 1.206 -0.430 N14 Y4C 19 Y4C C29 C14 C 0 1 N N N N N N 15.349 11.632 -48.887 1.217 0.985 -1.058 C29 Y4C 20 Y4C C30 C15 C 0 1 N N N N N N 10.543 3.139 -43.018 -9.811 -0.422 -0.231 C30 Y4C 21 Y4C C32 C16 C 0 1 N N N N N N 11.213 2.099 -42.133 -9.787 -1.941 -0.047 C32 Y4C 22 Y4C C33 C17 C 0 1 N N N N N N 10.272 1.682 -41.017 -11.188 -2.506 -0.287 C33 Y4C 23 Y4C C34 C18 C 0 1 N N N N N N 11.030 1.719 -39.698 -11.165 -4.024 -0.103 C34 Y4C 24 Y4C H36 H1 H 0 1 N N N N N N 17.636 13.415 -45.225 4.194 2.789 1.005 H36 Y4C 25 Y4C H37 H2 H 0 1 N N N N N N 16.543 12.019 -44.938 4.696 1.322 1.882 H37 Y4C 26 Y4C H39 H3 H 0 1 N N N N N N 14.003 12.460 -45.096 5.630 1.240 -2.208 H39 Y4C 27 Y4C H38 H4 H 0 1 N N N N N N 13.486 14.146 -45.435 4.810 2.737 -1.696 H38 Y4C 28 Y4C H41 H5 H 0 1 N N N N N N 14.552 14.017 -47.718 3.165 1.276 -2.765 H41 Y4C 29 Y4C H42 H6 H 0 1 N N N N N N 13.333 12.713 -47.513 3.635 -0.082 -1.713 H42 Y4C 30 Y4C H44 H7 H 0 1 N N N N N N 17.497 11.855 -47.229 3.103 -0.037 0.618 H44 Y4C 31 Y4C H43 H8 H 0 1 N N N N N N 16.933 13.516 -47.616 2.236 1.354 1.314 H43 Y4C 32 Y4C H49 H9 H 0 1 N N N N N N 14.254 3.641 -45.846 -6.494 1.340 2.491 H49 Y4C 33 Y4C H50 H10 H 0 1 N N N N N N 12.332 7.220 -44.343 -5.587 0.854 -1.661 H50 Y4C 34 Y4C H52 H11 H 0 1 N N N N N N 16.580 9.851 -48.659 0.267 2.757 -0.284 H52 Y4C 35 Y4C H51 H12 H 0 1 N N N N N N 15.443 9.793 -50.048 0.461 1.448 0.906 H51 Y4C 36 Y4C H53 H13 H 0 1 N N N N N N 12.647 2.258 -44.549 -8.747 0.432 2.099 H53 Y4C 37 Y4C H54 H14 H 0 1 N N N N N N 10.741 5.818 -43.059 -7.842 -0.054 -2.041 H54 Y4C 38 Y4C H35 H17 H 0 1 N N N N N N 15.253 6.028 -46.036 -4.486 2.382 1.311 H35 Y4C 39 Y4C H40 H19 H 0 1 N N N N N N 13.672 9.649 -48.037 -1.277 0.549 -1.130 H40 Y4C 40 Y4C H56 H20 H 0 1 N N N N N N 14.377 11.899 -49.329 1.167 -0.093 -0.905 H56 Y4C 41 Y4C H55 H21 H 0 1 N N N N N N 16.153 12.149 -49.431 0.972 1.217 -2.095 H55 Y4C 42 Y4C H58 H22 H 0 1 N N N N N N 9.928 3.805 -42.394 -10.507 0.019 0.482 H58 Y4C 43 Y4C H57 H23 H 0 1 N N N N N N 9.903 2.631 -43.754 -10.130 -0.184 -1.246 H57 Y4C 44 Y4C H62 H24 H 0 1 N N N N N N 11.473 1.218 -42.739 -9.090 -2.382 -0.760 H62 Y4C 45 Y4C H63 H25 H 0 1 N N N N N N 12.128 2.527 -41.697 -9.468 -2.179 0.968 H63 Y4C 46 Y4C H65 H26 H 0 1 N N N N N N 9.420 2.376 -40.973 -11.885 -2.064 0.426 H65 Y4C 47 Y4C H64 H27 H 0 1 N N N N N N 9.905 0.662 -41.204 -11.507 -2.268 -1.302 H64 Y4C 48 Y4C H68 H28 H 0 1 N N N N N N 10.359 1.419 -38.880 -12.163 -4.427 -0.274 H68 Y4C 49 Y4C H66 H29 H 0 1 N N N N N N 11.883 1.026 -39.746 -10.468 -4.466 -0.816 H66 Y4C 50 Y4C H67 H30 H 0 1 N N N N N N 11.397 2.740 -39.515 -10.846 -4.262 0.912 H67 Y4C 51 Y4C S1 S1 S 0 1 N N N N N N ? ? ? 6.784 0.782 0.215 S1 Y4C 52 Y4C C2 C19 C 0 1 Y N N N N N ? ? ? 6.633 -0.973 0.215 C2 Y4C 53 Y4C C5 C20 C 0 1 Y N N N N N ? ? ? 6.839 -1.685 -0.953 C5 Y4C 54 Y4C C6 C21 C 0 1 Y N N N N N ? ? ? 6.721 -3.062 -0.953 C6 Y4C 55 Y4C C7 C22 C 0 1 Y N N N N N ? ? ? 6.396 -3.728 0.214 C7 Y4C 56 Y4C C8 C23 C 0 1 Y N N N N N ? ? ? 6.190 -3.017 1.381 C8 Y4C 57 Y4C C9 C24 C 0 1 Y N N N N N ? ? ? 6.313 -1.640 1.383 C9 Y4C 58 Y4C C12 C25 C 0 1 N N N N N N ? ? ? 6.265 -5.229 0.213 C12 Y4C 59 Y4C O2 O3 O 0 1 N N N N N N ? ? ? 7.625 1.113 -0.882 O2 Y4C 60 Y4C O1 O4 O 0 1 N N N N N N ? ? ? 7.070 1.160 1.555 O1 Y4C 61 Y4C H1 H31 H 0 1 N N N N N N ? ? ? 7.093 -1.164 -1.864 H1 Y4C 62 Y4C H2 H32 H 0 1 N N N N N N ? ? ? 6.881 -3.617 -1.865 H2 Y4C 63 Y4C H3 H33 H 0 1 N N N N N N ? ? ? 5.936 -3.537 2.293 H3 Y4C 64 Y4C H4 H34 H 0 1 N N N N N N ? ? ? 6.152 -1.084 2.295 H4 Y4C 65 Y4C H5 H35 H 0 1 N N N N N N ? ? ? 7.232 -5.678 0.442 H5 Y4C 66 Y4C H6 H36 H 0 1 N N N N N N ? ? ? 5.538 -5.531 0.967 H6 Y4C 67 Y4C H7 H37 H 0 1 N N N N N N ? ? ? 5.932 -5.564 -0.769 H7 Y4C 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y4C N2 C10 SING N N 1 Y4C N2 C11 SING N N 2 Y4C C3 C4 SING N N 3 Y4C C3 N6 SING N N 4 Y4C C3 O12 DOUB N N 5 Y4C C4 N14 SING N N 6 Y4C C4 O13 DOUB N N 7 Y4C N6 C19 SING N N 8 Y4C N9 C15 SING N N 9 Y4C N9 C29 SING N N 10 Y4C N9 C16 SING N N 11 Y4C C10 C16 SING N N 12 Y4C C11 C15 SING N N 13 Y4C N14 C26 SING N N 14 Y4C C19 C24 DOUB Y N 15 Y4C C19 C25 SING Y N 16 Y4C C23 C28 SING Y N 17 Y4C C23 C30 SING N N 18 Y4C C23 C27 DOUB Y N 19 Y4C C24 C27 SING Y N 20 Y4C C25 C28 DOUB Y N 21 Y4C C26 C29 SING N N 22 Y4C C30 C32 SING N N 23 Y4C C32 C33 SING N N 24 Y4C C33 C34 SING N N 25 Y4C C10 H36 SING N N 26 Y4C C10 H37 SING N N 27 Y4C C11 H39 SING N N 28 Y4C C11 H38 SING N N 29 Y4C C15 H41 SING N N 30 Y4C C15 H42 SING N N 31 Y4C C16 H44 SING N N 32 Y4C C16 H43 SING N N 33 Y4C C24 H49 SING N N 34 Y4C C25 H50 SING N N 35 Y4C C26 H52 SING N N 36 Y4C C26 H51 SING N N 37 Y4C C27 H53 SING N N 38 Y4C C28 H54 SING N N 39 Y4C N6 H35 SING N N 40 Y4C N14 H40 SING N N 41 Y4C C29 H56 SING N N 42 Y4C C29 H55 SING N N 43 Y4C C30 H58 SING N N 44 Y4C C30 H57 SING N N 45 Y4C C32 H62 SING N N 46 Y4C C32 H63 SING N N 47 Y4C C33 H65 SING N N 48 Y4C C33 H64 SING N N 49 Y4C C34 H68 SING N N 50 Y4C C34 H66 SING N N 51 Y4C C34 H67 SING N N 52 Y4C N2 S1 SING N N 53 Y4C S1 C2 SING N N 54 Y4C C2 C5 SING Y N 55 Y4C C5 C6 DOUB Y N 56 Y4C C6 C7 SING Y N 57 Y4C C7 C8 DOUB Y N 58 Y4C C8 C9 SING Y N 59 Y4C C9 C2 DOUB Y N 60 Y4C C7 C12 SING N N 61 Y4C S1 O2 DOUB N N 62 Y4C S1 O1 DOUB N N 63 Y4C C5 H1 SING N N 64 Y4C C6 H2 SING N N 65 Y4C C8 H3 SING N N 66 Y4C C9 H4 SING N N 67 Y4C C12 H5 SING N N 68 Y4C C12 H6 SING N N 69 Y4C C12 H7 SING N N 70 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y4C SMILES ACDLabs 12.01 "O=S(=O)(c1ccc(C)cc1)N1CCN(CCNC(=O)C(=O)Nc2ccc(CCCC)cc2)CC1" Y4C InChI InChI 1.06 "InChI=1S/C25H34N4O4S/c1-3-4-5-21-8-10-22(11-9-21)27-25(31)24(30)26-14-15-28-16-18-29(19-17-28)34(32,33)23-12-6-20(2)7-13-23/h6-13H,3-5,14-19H2,1-2H3,(H,26,30)(H,27,31)" Y4C InChIKey InChI 1.06 VCWKUFHIPVADCP-UHFFFAOYSA-N Y4C SMILES_CANONICAL CACTVS 3.385 "CCCCc1ccc(NC(=O)C(=O)NCCN2CCN(CC2)[S](=O)(=O)c3ccc(C)cc3)cc1" Y4C SMILES CACTVS 3.385 "CCCCc1ccc(NC(=O)C(=O)NCCN2CCN(CC2)[S](=O)(=O)c3ccc(C)cc3)cc1" Y4C SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCc1ccc(cc1)NC(=O)C(=O)NCCN2CCN(CC2)S(=O)(=O)c3ccc(cc3)C" Y4C SMILES "OpenEye OEToolkits" 2.0.7 "CCCCc1ccc(cc1)NC(=O)C(=O)NCCN2CCN(CC2)S(=O)(=O)c3ccc(cc3)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Y4C "SYSTEMATIC NAME" ACDLabs 12.01 "N~1~-(4-butylphenyl)-N~2~-{2-[4-(4-methylbenzene-1-sulfonyl)piperazin-1-yl]ethyl}ethanediamide" Y4C "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}'-(4-butylphenyl)-~{N}-[2-[4-(4-methylphenyl)sulfonylpiperazin-1-yl]ethyl]ethanediamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y4C "Create component" 2023-06-11 RCSB Y4C "Initial release" 2024-12-18 RCSB #