data_Y4X # _chem_comp.id Y4X _chem_comp.name "N-(1,3-benzothiazol-5-yl)-3,5-difluoro-Nalpha-[(5-hydroxy-1H-indol-3-yl)acetyl]-N-methyl-L-phenylalaninamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H22 F2 N4 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-11-20 _chem_comp.pdbx_modified_date 2024-12-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 520.550 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y4X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8V17 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y4X C16 C1 C 0 1 Y N N N N N 32.655 0.276 5.172 6.023 3.595 -1.168 C16 Y4X 1 Y4X C11 C2 C 0 1 Y N N N N N 30.553 -0.511 4.183 5.756 1.683 0.253 C11 Y4X 2 Y4X C12 C3 C 0 1 Y N N N N N 30.820 0.210 3.031 4.407 2.028 0.450 C12 Y4X 3 Y4X C13 C4 C 0 1 Y N N N N N 32.005 0.988 2.939 3.880 3.166 -0.166 C13 Y4X 4 Y4X C14 C5 C 0 1 Y N N N N N 32.916 1.020 4.013 4.688 3.940 -0.975 C14 Y4X 5 Y4X C17 C6 C 0 1 Y N N N N N 31.496 -0.474 5.277 6.555 2.479 -0.562 C17 Y4X 6 Y4X C01 C7 C 0 1 N N N N N N 30.274 -0.839 -5.821 -2.602 -1.580 -1.659 C01 Y4X 7 Y4X N02 N1 N 0 1 N N N N N N 30.172 -1.504 -4.506 -2.968 -0.701 -0.545 N02 Y4X 8 Y4X C03 C8 C 0 1 N N N N N N 29.274 -1.019 -3.533 -2.011 -0.199 0.259 C03 Y4X 9 Y4X C04 C9 C 0 1 N N S N N N 29.263 -1.828 -2.232 -0.579 -0.637 0.092 C04 Y4X 10 Y4X N05 N2 N 0 1 N N N N N N 29.020 -0.934 -1.118 0.260 0.047 1.078 N05 Y4X 11 Y4X C06 C10 C 0 1 N N N N N N 30.024 -0.408 -0.285 1.574 0.229 0.836 C06 Y4X 12 Y4X C07 C11 C 0 1 N N N N N N 29.533 0.534 0.812 2.437 0.934 1.851 C07 Y4X 13 Y4X C08 C12 C 0 1 Y N N N N N 29.714 -0.027 2.213 3.853 1.007 1.342 C08 Y4X 14 Y4X C09 C13 C 0 1 Y N N N N N 28.829 -0.895 2.849 4.846 0.147 1.619 C09 Y4X 15 Y4X N10 N3 N 0 1 Y N N N N N 29.326 -1.157 4.011 5.991 0.534 0.978 N10 Y4X 16 Y4X O15 O1 O 0 1 N N N N N N 34.076 1.814 3.931 4.177 5.043 -1.585 O15 Y4X 17 Y4X O18 O2 O 0 1 N N N N N N 31.174 -0.696 -0.473 2.061 -0.174 -0.199 O18 Y4X 18 Y4X C19 C14 C 0 1 N N N N N N 28.121 -2.818 -2.404 -0.481 -2.150 0.301 C19 Y4X 19 Y4X C20 C15 C 0 1 Y N N N N N 28.157 -3.774 -1.218 0.926 -2.606 0.013 C20 Y4X 20 Y4X C21 C16 C 0 1 Y N N N N N 27.576 -3.479 0.007 1.281 -2.987 -1.268 C21 Y4X 21 Y4X C22 C17 C 0 1 Y N N N N N 27.634 -4.398 1.007 2.573 -3.407 -1.533 C22 Y4X 22 Y4X F23 F1 F 0 1 N N N N N N 27.088 -3.990 2.159 2.919 -3.780 -2.785 F23 Y4X 23 Y4X C24 C18 C 0 1 Y N N N N N 28.250 -5.626 0.886 3.511 -3.444 -0.516 C24 Y4X 24 Y4X C25 C19 C 0 1 Y N N N N N 28.764 -5.906 -0.342 3.155 -3.062 0.766 C25 Y4X 25 Y4X F26 F2 F 0 1 N N N N N N 29.388 -7.111 -0.533 4.070 -3.098 1.760 F26 Y4X 26 Y4X C27 C20 C 0 1 Y N N N N N 28.775 -4.976 -1.384 1.863 -2.638 1.028 C27 Y4X 27 Y4X O28 O3 O 0 1 N N N N N N 28.606 -0.039 -3.776 -2.302 0.606 1.119 O28 Y4X 28 Y4X C29 C21 C 0 1 Y N N N N N 30.901 -2.697 -4.262 -4.313 -0.383 -0.317 C29 Y4X 29 Y4X C30 C22 C 0 1 Y N N N N N 32.089 -2.684 -3.566 -4.744 0.917 -0.468 C30 Y4X 30 Y4X C31 C23 C 0 1 Y N N N N N 32.774 -3.912 -3.397 -6.095 1.248 -0.241 C31 Y4X 31 Y4X N32 N4 N 0 1 Y N N N N N 34.008 -3.961 -2.629 -6.712 2.442 -0.331 N32 Y4X 32 Y4X C33 C24 C 0 1 Y N N N N N 34.460 -5.253 -2.617 -7.964 2.488 -0.071 C33 Y4X 33 Y4X S34 S1 S 0 1 Y N N N N N 33.411 -6.320 -3.434 -8.574 0.950 0.346 S34 Y4X 34 Y4X C35 C25 C 0 1 Y N N N N N 32.287 -5.119 -3.914 -6.979 0.232 0.138 C35 Y4X 35 Y4X C36 C26 C 0 1 Y N N N N N 31.041 -5.119 -4.617 -6.528 -1.078 0.285 C36 Y4X 36 Y4X C37 C27 C 0 1 Y N N N N N 30.381 -3.910 -4.797 -5.208 -1.385 0.056 C37 Y4X 37 Y4X H161 H1 H 0 0 N N N N N N 33.362 0.288 5.988 6.647 4.207 -1.803 H161 Y4X 38 Y4X H131 H2 H 0 0 N N N N N N 32.208 1.556 2.043 2.844 3.434 -0.017 H131 Y4X 39 Y4X H171 H3 H 0 0 N N N N N N 31.296 -1.033 6.179 7.591 2.222 -0.719 H171 Y4X 40 Y4X H011 H4 H 0 0 N N N N N N 31.022 -1.358 -6.438 -2.600 -2.616 -1.319 H011 Y4X 41 Y4X H012 H5 H 0 0 N N N N N N 29.297 -0.871 -6.325 -3.325 -1.464 -2.466 H012 Y4X 42 Y4X H013 H6 H 0 0 N N N N N N 30.579 0.208 -5.679 -1.609 -1.314 -2.020 H013 Y4X 43 Y4X H041 H7 H 0 0 N N N N N N 30.216 -2.364 -2.113 -0.237 -0.386 -0.912 H041 Y4X 44 Y4X H051 H8 H 0 0 N N N N N N 28.073 -0.673 -0.928 -0.129 0.370 1.906 H051 Y4X 45 Y4X H072 H9 H 0 0 N N N N N N 28.463 0.730 0.650 2.057 1.942 2.014 H072 Y4X 46 Y4X H071 H10 H 0 0 N N N N N N 30.094 1.477 0.739 2.416 0.382 2.791 H071 Y4X 47 Y4X H091 H11 H 0 0 N N N N N N 27.902 -1.276 2.446 4.755 -0.721 2.255 H091 Y4X 48 Y4X H101 H12 H 0 0 N N N N N N 28.892 -1.743 4.695 6.841 0.070 1.026 H101 Y4X 49 Y4X H151 H13 H 0 0 N N N N N N 34.579 1.724 4.732 3.802 4.870 -2.460 H151 Y4X 50 Y4X H192 H14 H 0 0 N N N N N N 27.160 -2.282 -2.425 -0.737 -2.392 1.332 H192 Y4X 51 Y4X H191 H15 H 0 0 N N N N N N 28.249 -3.379 -3.342 -1.172 -2.655 -0.374 H191 Y4X 52 Y4X H211 H16 H 0 0 N N N N N N 27.084 -2.531 0.164 0.549 -2.958 -2.061 H211 Y4X 53 Y4X H241 H17 H 0 0 N N N N N N 28.320 -6.319 1.711 4.519 -3.772 -0.722 H241 Y4X 54 Y4X H271 H18 H 0 0 N N N N N N 29.270 -5.209 -2.315 1.587 -2.336 2.027 H271 Y4X 55 Y4X H301 H19 H 0 0 N N N N N N 32.486 -1.765 -3.161 -4.043 1.685 -0.761 H301 Y4X 56 Y4X H331 H20 H 0 0 N N N N N N 35.380 -5.562 -2.142 -8.560 3.388 -0.110 H331 Y4X 57 Y4X H361 H21 H 0 0 N N N N N N 30.623 -6.038 -4.999 -7.219 -1.855 0.578 H361 Y4X 58 Y4X H371 H22 H 0 0 N N N N N N 29.456 -3.890 -5.353 -4.863 -2.403 0.167 H371 Y4X 59 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y4X N02 C01 SING N N 1 Y4X C06 N05 SING N N 2 Y4X C08 C07 SING N N 3 Y4X C09 C08 DOUB Y N 4 Y4X N10 C09 SING Y N 5 Y4X C11 N10 SING Y N 6 Y4X C12 C11 DOUB Y N 7 Y4X C13 C12 SING Y N 8 Y4X C14 C13 DOUB Y N 9 Y4X O15 C14 SING N N 10 Y4X C16 C14 SING Y N 11 Y4X C17 C16 DOUB Y N 12 Y4X C07 C06 SING N N 13 Y4X O18 C06 DOUB N N 14 Y4X N05 C04 SING N N 15 Y4X C19 C04 SING N N 16 Y4X C20 C19 SING N N 17 Y4X C21 C20 DOUB Y N 18 Y4X C22 C21 SING Y N 19 Y4X F23 C22 SING N N 20 Y4X C24 C22 DOUB Y N 21 Y4X C25 C24 SING Y N 22 Y4X F26 C25 SING N N 23 Y4X C27 C25 DOUB Y N 24 Y4X C04 C03 SING N N 25 Y4X O28 C03 DOUB N N 26 Y4X C03 N02 SING N N 27 Y4X C29 N02 SING N N 28 Y4X C30 C29 DOUB Y N 29 Y4X C31 C30 SING Y N 30 Y4X C33 N32 DOUB Y N 31 Y4X S34 C33 SING Y N 32 Y4X N32 C31 SING Y N 33 Y4X C35 C31 DOUB Y N 34 Y4X C36 C35 SING Y N 35 Y4X C37 C36 DOUB Y N 36 Y4X C08 C12 SING Y N 37 Y4X C11 C17 SING Y N 38 Y4X C20 C27 SING Y N 39 Y4X C29 C37 SING Y N 40 Y4X S34 C35 SING Y N 41 Y4X C16 H161 SING N N 42 Y4X C13 H131 SING N N 43 Y4X C17 H171 SING N N 44 Y4X C01 H011 SING N N 45 Y4X C01 H012 SING N N 46 Y4X C01 H013 SING N N 47 Y4X C04 H041 SING N N 48 Y4X N05 H051 SING N N 49 Y4X C07 H072 SING N N 50 Y4X C07 H071 SING N N 51 Y4X C09 H091 SING N N 52 Y4X N10 H101 SING N N 53 Y4X O15 H151 SING N N 54 Y4X C19 H192 SING N N 55 Y4X C19 H191 SING N N 56 Y4X C21 H211 SING N N 57 Y4X C24 H241 SING N N 58 Y4X C27 H271 SING N N 59 Y4X C30 H301 SING N N 60 Y4X C33 H331 SING N N 61 Y4X C36 H361 SING N N 62 Y4X C37 H371 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y4X SMILES ACDLabs 12.01 "Oc1ccc2[NH]cc(CC(=O)NC(Cc3cc(F)cc(F)c3)C(=O)N(C)c3cc4ncsc4cc3)c2c1" Y4X InChI InChI 1.06 "InChI=1S/C27H22F2N4O3S/c1-33(19-2-5-25-23(11-19)31-14-37-25)27(36)24(8-15-6-17(28)10-18(29)7-15)32-26(35)9-16-13-30-22-4-3-20(34)12-21(16)22/h2-7,10-14,24,30,34H,8-9H2,1H3,(H,32,35)/t24-/m1/s1" Y4X InChIKey InChI 1.06 ZEQNNGUVENPVCM-XMMPIXPASA-N Y4X SMILES_CANONICAL CACTVS 3.385 "CN(C(=O)[C@H](Cc1cc(F)cc(F)c1)NC(=O)Cc2c[nH]c3ccc(O)cc23)c4ccc5scnc5c4" Y4X SMILES CACTVS 3.385 "CN(C(=O)[CH](Cc1cc(F)cc(F)c1)NC(=O)Cc2c[nH]c3ccc(O)cc23)c4ccc5scnc5c4" Y4X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(c1ccc2c(c1)ncs2)C(=O)[C@H](Cc3cc(cc(c3)F)F)NC(=O)Cc4c[nH]c5c4cc(cc5)O" Y4X SMILES "OpenEye OEToolkits" 2.0.7 "CN(c1ccc2c(c1)ncs2)C(=O)C(Cc3cc(cc(c3)F)F)NC(=O)Cc4c[nH]c5c4cc(cc5)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Y4X "SYSTEMATIC NAME" ACDLabs 12.01 "N-(1,3-benzothiazol-5-yl)-3,5-difluoro-Nalpha-[(5-hydroxy-1H-indol-3-yl)acetyl]-N-methyl-L-phenylalaninamide" Y4X "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-~{N}-(1,3-benzothiazol-5-yl)-3-[3,5-bis(fluoranyl)phenyl]-~{N}-methyl-2-[2-(5-oxidanyl-1~{H}-indol-3-yl)ethanoylamino]propanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y4X "Create component" 2023-11-20 RCSB Y4X "Initial release" 2024-12-11 RCSB #