data_Y5E # _chem_comp.id Y5E _chem_comp.name mepyramine _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H23 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "~{N}'-[(4-methoxyphenyl)methyl]-~{N},~{N}-dimethyl-~{N}'-pyridin-2-yl-ethane-1,2-diamine" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-11-21 _chem_comp.pdbx_modified_date 2024-01-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 285.384 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y5E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8X63 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y5E C10 C1 C 0 1 N N N N N N 136.965 132.456 172.058 -3.104 1.088 -0.305 C10 Y5E 1 Y5E C13 C2 C 0 1 N N N N N N 135.765 130.597 171.128 -3.224 3.389 0.439 C13 Y5E 2 Y5E C15 C3 C 0 1 Y N N N N N 137.956 135.208 175.441 -0.312 -2.420 -0.751 C15 Y5E 3 Y5E C17 C4 C 0 1 Y N N N N N 138.008 137.487 176.110 -1.402 -4.146 0.476 C17 Y5E 4 Y5E C20 C5 C 0 1 Y N N N N N 136.403 135.704 170.636 2.211 -0.479 -0.802 C20 Y5E 5 Y5E C21 C6 C 0 1 Y N N N N N 135.732 136.661 169.875 3.467 -0.256 -0.271 C21 Y5E 6 Y5E C01 C7 C 0 1 N N N N N N 135.484 138.339 167.341 5.940 0.117 0.754 C01 Y5E 7 Y5E C03 C8 C 0 1 Y N N N N N 136.405 137.792 169.434 3.799 1.000 0.216 C03 Y5E 8 Y5E C04 C9 C 0 1 Y N N N N N 137.744 137.966 169.747 2.869 2.028 0.169 C04 Y5E 9 Y5E C05 C10 C 0 1 Y N N N N N 138.414 137.013 170.511 1.615 1.799 -0.362 C05 Y5E 10 Y5E C06 C11 C 0 1 Y N N N N N 137.742 135.878 170.951 1.286 0.547 -0.847 C06 Y5E 11 Y5E C07 C12 C 0 1 N N N N N N 138.478 134.820 171.793 -0.082 0.302 -1.432 C07 Y5E 12 Y5E C09 C13 C 0 1 N N N N N N 136.977 133.394 173.296 -1.764 0.840 0.390 C09 Y5E 13 Y5E C12 C14 C 0 1 N N N N N N 137.007 130.315 173.159 -5.257 2.163 -0.038 C12 Y5E 14 Y5E C14 C15 C 0 1 Y N N N N N 137.865 135.628 174.126 -1.123 -1.499 -0.095 C14 Y5E 15 Y5E C16 C16 C 0 1 Y N N N N N 138.031 136.144 176.474 -0.454 -3.765 -0.465 C16 Y5E 16 Y5E C18 C17 C 0 1 Y N N N N N 137.913 137.843 174.772 -2.177 -3.180 1.085 C18 Y5E 17 Y5E N08 N1 N 0 1 N N N N N N 137.782 134.615 173.055 -0.992 -0.144 -0.374 N08 Y5E 18 Y5E N11 N2 N 0 1 N N N N N N 136.183 131.243 172.379 -3.878 2.074 0.461 N11 Y5E 19 Y5E N19 N3 N 0 1 Y N N N N N 137.842 136.919 173.819 -2.020 -1.903 0.791 N19 Y5E 20 Y5E O02 O1 O 0 1 N N N N N N 135.724 138.752 168.664 5.034 1.222 0.738 O02 Y5E 21 Y5E H1 H1 H 0 1 N N N N N N 137.996 132.172 171.801 -2.926 1.468 -1.311 H1 Y5E 22 Y5E H2 H2 H 0 1 N N N N N N 136.504 132.977 171.206 -3.662 0.154 -0.363 H2 Y5E 23 Y5E H3 H3 H 0 1 N N N N N N 135.182 129.693 171.358 -3.139 3.735 -0.591 H3 Y5E 24 Y5E H4 H4 H 0 1 N N N N N N 135.145 131.294 170.545 -3.818 4.100 1.014 H4 Y5E 25 Y5E H5 H5 H 0 1 N N N N N N 136.655 130.320 170.543 -2.230 3.307 0.878 H5 Y5E 26 Y5E H6 H6 H 0 1 N N N N N N 137.969 134.152 175.669 0.415 -2.088 -1.478 H6 Y5E 27 Y5E H7 H7 H 0 1 N N N N N N 138.064 138.253 176.869 -1.537 -5.189 0.722 H7 Y5E 28 Y5E H8 H8 H 0 1 N N N N N N 135.878 134.825 170.981 1.953 -1.456 -1.185 H8 Y5E 29 Y5E H9 H9 H 0 1 N N N N N N 134.690 136.522 169.629 4.189 -1.058 -0.236 H9 Y5E 30 Y5E H10 H10 H 0 1 N N N N N N 134.951 139.134 166.799 5.514 -0.694 1.344 H10 Y5E 31 Y5E H11 H11 H 0 1 N N N N N N 136.442 138.134 166.841 6.111 -0.226 -0.266 H11 Y5E 32 Y5E H12 H12 H 0 1 N N N N N N 134.871 137.426 167.348 6.886 0.430 1.196 H12 Y5E 33 Y5E H13 H13 H 0 1 N N N N N N 138.269 138.843 169.398 3.125 3.006 0.548 H13 Y5E 34 Y5E H14 H14 H 0 1 N N N N N N 139.455 137.156 170.761 0.890 2.599 -0.399 H14 Y5E 35 Y5E H15 H15 H 0 1 N N N N N N 138.512 133.871 171.237 -0.460 1.225 -1.872 H15 Y5E 36 Y5E H16 H16 H 0 1 N N N N N N 139.503 135.164 171.994 -0.015 -0.467 -2.202 H16 Y5E 37 Y5E H17 H17 H 0 1 N N N N N N 135.943 133.689 173.529 -1.206 1.774 0.448 H17 Y5E 38 Y5E H18 H18 H 0 1 N N N N N N 137.404 132.849 174.151 -1.942 0.460 1.396 H18 Y5E 39 Y5E H19 H19 H 0 1 N N N N N N 137.320 130.800 174.096 -5.740 1.191 0.054 H19 Y5E 40 Y5E H20 H20 H 0 1 N N N N N N 136.423 129.412 173.391 -5.808 2.900 0.547 H20 Y5E 41 Y5E H21 H21 H 0 1 N N N N N N 137.897 130.036 172.576 -5.245 2.465 -1.085 H21 Y5E 42 Y5E H22 H22 H 0 1 N N N N N N 138.104 135.840 177.508 0.159 -4.503 -0.962 H22 Y5E 43 Y5E H23 H23 H 0 1 N N N N N N 137.896 138.888 174.501 -2.915 -3.472 1.816 H23 Y5E 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y5E C01 O02 SING N N 1 Y5E O02 C03 SING N N 2 Y5E C03 C04 DOUB Y N 3 Y5E C03 C21 SING Y N 4 Y5E C04 C05 SING Y N 5 Y5E C21 C20 DOUB Y N 6 Y5E C05 C06 DOUB Y N 7 Y5E C20 C06 SING Y N 8 Y5E C06 C07 SING N N 9 Y5E C13 N11 SING N N 10 Y5E C07 N08 SING N N 11 Y5E C10 N11 SING N N 12 Y5E C10 C09 SING N N 13 Y5E N11 C12 SING N N 14 Y5E N08 C09 SING N N 15 Y5E N08 C14 SING N N 16 Y5E N19 C14 DOUB Y N 17 Y5E N19 C18 SING Y N 18 Y5E C14 C15 SING Y N 19 Y5E C18 C17 DOUB Y N 20 Y5E C15 C16 DOUB Y N 21 Y5E C17 C16 SING Y N 22 Y5E C10 H1 SING N N 23 Y5E C10 H2 SING N N 24 Y5E C13 H3 SING N N 25 Y5E C13 H4 SING N N 26 Y5E C13 H5 SING N N 27 Y5E C15 H6 SING N N 28 Y5E C17 H7 SING N N 29 Y5E C20 H8 SING N N 30 Y5E C21 H9 SING N N 31 Y5E C01 H10 SING N N 32 Y5E C01 H11 SING N N 33 Y5E C01 H12 SING N N 34 Y5E C04 H13 SING N N 35 Y5E C05 H14 SING N N 36 Y5E C07 H15 SING N N 37 Y5E C07 H16 SING N N 38 Y5E C09 H17 SING N N 39 Y5E C09 H18 SING N N 40 Y5E C12 H19 SING N N 41 Y5E C12 H20 SING N N 42 Y5E C12 H21 SING N N 43 Y5E C16 H22 SING N N 44 Y5E C18 H23 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y5E InChI InChI 1.06 "InChI=1S/C17H23N3O/c1-19(2)12-13-20(17-6-4-5-11-18-17)14-15-7-9-16(21-3)10-8-15/h4-11H,12-14H2,1-3H3" Y5E InChIKey InChI 1.06 YECBIJXISLIIDS-UHFFFAOYSA-N Y5E SMILES_CANONICAL CACTVS 3.385 "COc1ccc(CN(CCN(C)C)c2ccccn2)cc1" Y5E SMILES CACTVS 3.385 "COc1ccc(CN(CCN(C)C)c2ccccn2)cc1" Y5E SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(C)CCN(Cc1ccc(cc1)OC)c2ccccn2" Y5E SMILES "OpenEye OEToolkits" 2.0.7 "CN(C)CCN(Cc1ccc(cc1)OC)c2ccccn2" # _pdbx_chem_comp_identifier.comp_id Y5E _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}'-[(4-methoxyphenyl)methyl]-~{N},~{N}-dimethyl-~{N}'-pyridin-2-yl-ethane-1,2-diamine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y5E "Create component" 2023-11-21 PDBJ Y5E "Initial release" 2024-01-17 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id Y5E _pdbx_chem_comp_synonyms.name "~{N}'-[(4-methoxyphenyl)methyl]-~{N},~{N}-dimethyl-~{N}'-pyridin-2-yl-ethane-1,2-diamine" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? #