data_Y5I # _chem_comp.id Y5I _chem_comp.name "3-[2-fluoranyl-4-[3-[2-fluoranyl-4-(5-methyl-1,3,4-thiadiazol-2-yl)phenoxy]propoxy]phenyl]propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H20 F2 N2 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-12 _chem_comp.pdbx_modified_date 2024-05-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 434.456 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y5I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PBO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y5I C21 C1 C 0 1 Y N N N N N 16.846 34.271 9.382 5.599 1.477 -0.267 C21 Y5I 1 Y5I C20 C2 C 0 1 Y N N N N N 16.613 32.983 9.756 4.355 2.076 -0.295 C20 Y5I 2 Y5I C18 C3 C 0 1 Y N N N N N 19.919 28.347 15.333 -6.413 1.127 0.335 C18 Y5I 3 Y5I C16 C4 C 0 1 N N N N N N 19.023 30.381 18.064 -8.294 -1.321 -0.677 C16 Y5I 4 Y5I C15 C5 C 0 1 N N N N N N 19.083 28.861 17.673 -7.723 -0.976 0.700 C15 Y5I 5 Y5I C14 C6 C 0 1 Y N N N N N 18.883 28.617 16.189 -6.417 -0.243 0.533 C14 Y5I 6 Y5I C6 C7 C 0 1 Y N N N N N 18.410 32.182 8.418 3.310 -0.064 0.063 C6 Y5I 7 Y5I C4 C8 C 0 1 Y N N N N N 17.836 34.538 8.458 5.703 0.098 -0.072 C4 Y5I 8 Y5I C2 C9 C 0 1 Y N N N N N 18.815 38.027 6.928 9.031 -1.953 0.069 C2 Y5I 9 Y5I O3 O1 O 0 1 N N N N N N 17.843 30.270 20.058 -10.030 -2.277 0.598 O3 Y5I 10 Y5I C1 C10 C 0 1 N N N N N N 19.264 39.219 6.146 10.124 -2.985 0.167 C1 Y5I 11 Y5I C9 C11 C 0 1 N N N N N N 17.118 28.370 10.066 -0.428 1.889 -0.042 C9 Y5I 12 Y5I C11 C12 C 0 1 Y N N N N N 18.428 28.201 13.509 -4.017 1.103 0.230 C11 Y5I 13 Y5I C12 C13 C 0 1 Y N N N N N 17.355 28.505 14.329 -4.025 -0.271 0.423 C12 Y5I 14 Y5I N1 N1 N 0 1 Y N N N N N 18.297 38.159 8.147 9.208 -0.686 -0.121 N1 Y5I 15 Y5I N2 N2 N 0 1 Y N N N N N 17.916 36.943 8.760 8.185 0.052 -0.180 N2 Y5I 16 Y5I C3 C14 C 0 1 Y N N N N N 18.145 35.894 8.017 7.033 -0.547 -0.041 C3 Y5I 17 Y5I C5 C15 C 0 1 Y N N N N N 18.590 33.480 7.951 4.549 -0.669 0.093 C5 Y5I 18 Y5I C7 C16 C 0 1 Y N N N N N 17.401 31.909 9.331 3.209 1.307 -0.125 C7 Y5I 19 Y5I O1 O2 O 0 1 N N N N N N 17.070 30.661 9.756 1.986 1.900 -0.153 O1 Y5I 20 Y5I C8 C17 C 0 1 N N N N N N 17.754 29.498 9.316 0.850 1.050 0.018 C8 Y5I 21 Y5I C10 C18 C 0 1 N N N N N N 17.036 28.595 11.563 -1.645 0.979 0.140 C10 Y5I 22 Y5I O2 O3 O 0 1 N N N N N N 18.247 28.085 12.160 -2.838 1.763 0.084 O2 Y5I 23 Y5I C13 C19 C 0 1 Y N N N N N 17.603 28.663 15.675 -5.224 -0.940 0.577 C13 Y5I 24 Y5I C17 C20 C 0 1 N N N N N N 18.915 30.542 19.569 -9.600 -2.054 -0.509 C17 Y5I 25 Y5I O4 O4 O 0 1 N N N N N N 19.905 30.871 20.249 -10.286 -2.458 -1.590 O4 Y5I 26 Y5I F1 F1 F 0 1 N N N N N N 21.174 28.384 15.843 -7.580 1.806 0.292 F1 Y5I 27 Y5I C19 C21 C 0 1 Y N N N N N 19.733 28.144 14.002 -5.214 1.802 0.186 C19 Y5I 28 Y5I F2 F2 F 0 1 N N N N N N 15.633 32.745 10.654 4.252 3.409 -0.488 F2 Y5I 29 Y5I S1 S1 S 0 1 Y N N N N N 18.852 36.319 6.478 7.351 -2.267 0.185 S1 Y5I 30 Y5I H19 H1 H 0 1 N N N N N N 16.262 35.076 9.804 6.489 2.073 -0.399 H19 Y5I 31 Y5I H16 H2 H 0 1 N N N N N N 19.937 30.881 17.712 -8.462 -0.403 -1.240 H16 Y5I 32 Y5I H17 H3 H 0 1 N N N N N N 18.146 30.842 17.587 -7.589 -1.954 -1.215 H17 Y5I 33 Y5I H14 H4 H 0 1 N N N N N N 18.295 28.327 18.224 -8.429 -0.343 1.238 H14 Y5I 34 Y5I H15 H5 H 0 1 N N N N N N 20.067 28.464 17.963 -7.555 -1.894 1.264 H15 Y5I 35 Y5I H5 H6 H 0 1 N N N N N N 19.054 31.388 8.071 2.417 -0.657 0.195 H5 Y5I 36 Y5I H1 H7 H 0 1 N N N N N N 19.656 38.892 5.171 10.435 -3.088 1.207 H1 Y5I 37 Y5I H2 H8 H 0 1 N N N N N N 18.412 39.897 5.990 9.753 -3.943 -0.198 H2 Y5I 38 Y5I H3 H9 H 0 1 N N N N N N 20.054 39.745 6.701 10.976 -2.671 -0.437 H3 Y5I 39 Y5I H8 H10 H 0 1 N N N N N N 16.097 28.230 9.681 -0.410 2.636 0.752 H8 Y5I 40 Y5I H9 H11 H 0 1 N N N N N N 17.706 27.459 9.885 -0.490 2.388 -1.009 H9 Y5I 41 Y5I H12 H12 H 0 1 N N N N N N 16.358 28.614 13.928 -3.094 -0.817 0.458 H12 Y5I 42 Y5I H4 H13 H 0 1 N N N N N N 19.325 33.671 7.184 4.626 -1.736 0.239 H4 Y5I 43 Y5I H6 H14 H 0 1 N N N N N N 17.628 29.362 8.232 0.911 0.551 0.985 H6 Y5I 44 Y5I H7 H15 H 0 1 N N N N N N 18.826 29.566 9.555 0.832 0.303 -0.776 H7 Y5I 45 Y5I H10 H16 H 0 1 N N N N N N 16.941 29.670 11.774 -1.663 0.233 -0.653 H10 Y5I 46 Y5I H11 H17 H 0 1 N N N N N N 16.165 28.062 11.973 -1.583 0.480 1.107 H11 Y5I 47 Y5I H13 H18 H 0 1 N N N N N N 16.773 28.827 16.346 -5.229 -2.009 0.732 H13 Y5I 48 Y5I H20 H19 H 0 1 N N N N N N 19.672 30.868 21.170 -11.119 -2.924 -1.433 H20 Y5I 49 Y5I H18 H20 H 0 1 N N N N N N 20.568 27.945 13.347 -5.211 2.871 0.036 H18 Y5I 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y5I C1 C2 SING N N 1 Y5I S1 C2 SING Y N 2 Y5I S1 C3 SING Y N 3 Y5I C2 N1 DOUB Y N 4 Y5I C5 C6 DOUB Y N 5 Y5I C5 C4 SING Y N 6 Y5I C3 C4 SING N N 7 Y5I C3 N2 DOUB Y N 8 Y5I N1 N2 SING Y N 9 Y5I C6 C7 SING Y N 10 Y5I C4 C21 DOUB Y N 11 Y5I C8 O1 SING N N 12 Y5I C8 C9 SING N N 13 Y5I C7 C20 DOUB Y N 14 Y5I C7 O1 SING N N 15 Y5I C21 C20 SING Y N 16 Y5I C20 F2 SING N N 17 Y5I C9 C10 SING N N 18 Y5I C10 O2 SING N N 19 Y5I O2 C11 SING N N 20 Y5I C11 C19 DOUB Y N 21 Y5I C11 C12 SING Y N 22 Y5I C19 C18 SING Y N 23 Y5I C12 C13 DOUB Y N 24 Y5I C18 F1 SING N N 25 Y5I C18 C14 DOUB Y N 26 Y5I C13 C14 SING Y N 27 Y5I C14 C15 SING N N 28 Y5I C15 C16 SING N N 29 Y5I C16 C17 SING N N 30 Y5I C17 O3 DOUB N N 31 Y5I C17 O4 SING N N 32 Y5I C21 H19 SING N N 33 Y5I C16 H16 SING N N 34 Y5I C16 H17 SING N N 35 Y5I C15 H14 SING N N 36 Y5I C15 H15 SING N N 37 Y5I C6 H5 SING N N 38 Y5I C1 H1 SING N N 39 Y5I C1 H2 SING N N 40 Y5I C1 H3 SING N N 41 Y5I C9 H8 SING N N 42 Y5I C9 H9 SING N N 43 Y5I C12 H12 SING N N 44 Y5I C5 H4 SING N N 45 Y5I C8 H6 SING N N 46 Y5I C8 H7 SING N N 47 Y5I C10 H10 SING N N 48 Y5I C10 H11 SING N N 49 Y5I C13 H13 SING N N 50 Y5I O4 H20 SING N N 51 Y5I C19 H18 SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y5I InChI InChI 1.06 "InChI=1S/C21H20F2N2O4S/c1-13-24-25-21(30-13)15-4-7-19(18(23)11-15)29-10-2-9-28-16-6-3-14(17(22)12-16)5-8-20(26)27/h3-4,6-7,11-12H,2,5,8-10H2,1H3,(H,26,27)" Y5I InChIKey InChI 1.06 GKRRPRIZEADZRR-UHFFFAOYSA-N Y5I SMILES_CANONICAL CACTVS 3.385 "Cc1sc(nn1)c2ccc(OCCCOc3ccc(CCC(O)=O)c(F)c3)c(F)c2" Y5I SMILES CACTVS 3.385 "Cc1sc(nn1)c2ccc(OCCCOc3ccc(CCC(O)=O)c(F)c3)c(F)c2" Y5I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1nnc(s1)c2ccc(c(c2)F)OCCCOc3ccc(c(c3)F)CCC(=O)O" Y5I SMILES "OpenEye OEToolkits" 2.0.7 "Cc1nnc(s1)c2ccc(c(c2)F)OCCCOc3ccc(c(c3)F)CCC(=O)O" # _pdbx_chem_comp_identifier.comp_id Y5I _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "3-[2-fluoranyl-4-[3-[2-fluoranyl-4-(5-methyl-1,3,4-thiadiazol-2-yl)phenoxy]propoxy]phenyl]propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y5I "Create component" 2023-06-12 PDBE Y5I "Initial release" 2024-05-15 RCSB #