data_Y66 # _chem_comp.id Y66 _chem_comp.name "[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2S,3R,4R)-2,3,4-trihydroxy-5-[(1R,3S,3aS,13R)-1-hydroxy-10,11-dimethyl-3-{4-[(5-methyl-1,3,4-thiadiazol-2-yl)carbamoyl]phenyl}-4,6-dioxo-2,3,5,6-tetrahydro-1H-benzo[g]pyrrolo[2,1-e]pteridin-8(4H)-yl]pentyl dihydrogen diphosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C40 H46 N12 O17 P2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-01-06 _chem_comp.pdbx_modified_date 2024-06-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 1060.876 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y66 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8FQJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y66 C4 C1 C 0 1 N N N N N N -3.501 53.293 85.187 7.223 -2.219 -1.636 C4 Y66 1 Y66 C14 C2 C 0 1 Y N N N N N -6.780 61.309 80.046 6.789 0.872 3.621 C14 Y66 2 Y66 C5 C3 C 0 1 Y N N N N N -4.489 54.055 84.386 7.283 -0.771 -1.344 C5 Y66 3 Y66 C6 C4 C 0 1 Y N N N N N -4.081 55.063 83.542 7.764 -0.324 -0.112 C6 Y66 4 Y66 C11 C5 C 0 1 N N R N N N -7.980 57.549 80.326 7.637 4.322 1.767 C11 Y66 5 Y66 C7 C6 C 0 1 Y N N N N N -5.005 55.758 82.793 7.823 1.028 0.152 C7 Y66 6 Y66 C8 C7 C 0 1 Y N N N N N -6.351 55.483 82.916 7.407 1.941 -0.800 C8 Y66 7 Y66 C9 C8 C 0 1 N N S N N N -7.336 56.266 82.091 7.473 3.418 -0.505 C9 Y66 8 Y66 C10 C9 C 0 1 N N N N N N -6.797 56.716 80.746 8.479 3.694 0.634 C10 Y66 9 Y66 C12 C10 C 0 1 Y N N N N N -7.533 59.534 81.427 6.186 2.498 1.957 C12 Y66 10 Y66 C13 C11 C 0 1 Y N N N N N -7.426 60.118 80.187 6.834 2.166 3.144 C13 Y66 11 Y66 N1 N1 N 0 1 Y N N N N N -2.548 49.626 87.098 7.167 -6.274 -2.168 N1 Y66 12 Y66 N2 N2 N 0 1 Y N N N N N -2.724 50.672 86.210 7.150 -5.015 -2.091 N2 Y66 13 Y66 C3 C12 C 0 1 Y N N N N N -3.816 51.287 86.471 7.570 -4.472 -0.985 C3 Y66 14 Y66 N3 N3 N 0 1 N N N N N N -3.988 52.579 86.230 7.627 -3.111 -0.710 N3 Y66 15 Y66 C1 C13 C 0 1 N N N N N N -3.635 48.573 89.019 7.702 -8.438 -1.039 C1 Y66 16 Y66 C15 C14 C 0 1 N N N N N N -6.647 61.940 78.695 7.488 0.522 4.909 C15 Y66 17 Y66 C16 C15 C 0 1 Y N N N N N -6.244 61.945 81.205 6.101 -0.105 2.923 C16 Y66 18 Y66 C17 C16 C 0 1 N N N N N N -5.532 63.255 81.064 6.055 -1.516 3.450 C17 Y66 19 Y66 C18 C17 C 0 1 Y N N N N N -6.373 61.344 82.430 5.456 0.214 1.744 C18 Y66 20 Y66 C19 C18 C 0 1 Y N N N N N -7.035 60.129 82.549 5.497 1.513 1.258 C19 Y66 21 Y66 C2 C19 C 0 1 Y N N N N N -3.590 49.445 87.812 7.601 -6.938 -1.145 C2 Y66 22 Y66 C20 C20 C 0 1 N N N N N N -6.616 60.067 85.010 4.003 0.825 -0.617 C20 Y66 23 Y66 C21 C21 C 0 1 N N R N N N -6.931 61.518 85.225 2.565 0.939 -0.107 C21 Y66 24 Y66 C22 C22 C 0 1 N N R N N N -6.894 61.852 86.712 1.718 -0.179 -0.718 C22 Y66 25 Y66 C23 C23 C 0 1 N N S N N N -7.293 63.268 87.099 0.280 -0.065 -0.208 C23 Y66 26 Y66 C24 C24 C 0 1 N N N N N N -6.801 63.638 88.474 -0.568 -1.184 -0.818 C24 Y66 27 Y66 C25 C25 C 0 1 N N N N N N -6.117 70.054 88.603 -8.109 -2.344 1.489 C25 Y66 28 Y66 C26 C26 C 0 1 N N R N N N -6.851 71.350 88.729 -8.980 -1.174 1.951 C26 Y66 29 Y66 C27 C27 C 0 1 N N R N N N -6.131 73.423 88.142 -10.533 0.270 1.021 C27 Y66 30 Y66 C28 C28 C 0 1 Y N N N N N -3.761 74.036 87.523 -10.634 0.404 -1.497 C28 Y66 31 Y66 C29 C29 C 0 1 Y N N N N N -3.622 75.952 88.373 -12.169 1.906 -1.799 C29 Y66 32 Y66 C30 C30 C 0 1 Y N N N N N -3.287 77.223 88.833 -13.118 2.838 -2.253 C30 Y66 33 Y66 C31 C31 C 0 1 Y N N N N N -5.408 77.346 89.697 -13.644 3.320 -0.058 C31 Y66 34 Y66 C32 C32 C 0 1 Y N N N N N -4.888 75.512 88.643 -12.016 1.738 -0.413 C32 Y66 35 Y66 C33 C33 C 0 1 N N R N N N -6.519 72.731 86.860 -11.363 -0.951 1.491 C33 Y66 36 Y66 C34 C34 C 0 1 N N S N N N -7.574 71.828 87.470 -10.358 -1.695 2.404 C34 Y66 37 Y66 C35 C35 C 0 1 N N N N N N -7.775 58.276 83.866 5.001 3.062 -0.461 C35 Y66 38 Y66 C36 C36 C 0 1 N N N N N N -9.118 57.099 85.159 4.206 4.747 -1.837 C36 Y66 39 Y66 C37 C37 C 0 1 N N N N N N -9.535 57.014 82.869 5.932 5.350 -0.375 C37 Y66 40 Y66 C38 C38 C 0 1 N N S N N N -8.134 57.494 82.639 6.121 3.919 0.043 C38 Y66 41 Y66 C39 C39 C 0 1 Y N N N N N -6.757 54.464 83.754 6.930 1.505 -2.024 C39 Y66 42 Y66 C40 C40 C 0 1 Y N N N N N -5.833 53.760 84.495 6.865 0.155 -2.301 C40 Y66 43 Y66 N10 N4 N 0 1 Y N N N N N -5.841 76.166 89.303 -12.767 2.459 0.412 N10 Y66 44 Y66 N11 N5 N 0 1 N N N N N N -8.074 57.846 85.030 4.172 3.492 -1.375 N11 Y66 45 Y66 N12 N6 N 0 1 N N N N N N -9.843 56.665 84.112 5.012 5.678 -1.299 N12 Y66 46 Y66 N4 N7 N 0 1 N N N N N N -8.201 58.366 81.484 6.252 3.825 1.511 N4 Y66 47 Y66 N5 N8 N 0 1 N N N N N N -7.188 59.474 83.783 4.841 1.820 0.058 N5 Y66 48 Y66 N6 N9 N 0 1 Y N N N N N -4.971 74.279 88.090 -11.042 0.785 -0.253 N6 Y66 49 Y66 N7 N10 N 0 1 Y N N N N N -2.918 75.011 87.662 -11.297 1.064 -2.403 N7 Y66 50 Y66 N8 N11 N 0 1 N N N N N N -2.107 77.776 88.647 -13.313 3.047 -3.607 N8 Y66 51 Y66 N9 N12 N 0 1 Y N N N N N -4.214 77.901 89.519 -13.823 3.514 -1.352 N9 Y66 52 Y66 O1 O1 O 0 1 N N N N N N -2.305 53.344 84.952 6.804 -2.605 -2.710 O1 Y66 53 Y66 O10 O2 O 0 1 N N N N N N -5.700 67.999 87.014 -6.083 -3.572 -0.550 O10 Y66 54 Y66 O11 O3 O 0 1 N N N N N N -7.950 67.023 87.693 -5.221 -3.867 1.804 O11 Y66 55 Y66 O12 O4 O 0 1 N N N N N N -7.055 69.014 88.750 -6.802 -1.866 1.165 O12 Y66 56 Y66 O13 O5 O 0 1 N N N N N N -5.868 72.360 88.998 -9.204 -0.269 0.857 O13 Y66 57 Y66 O14 O6 O 0 1 N N N N N N -7.099 73.641 85.967 -12.512 -0.532 2.232 O14 Y66 58 Y66 O15 O7 O 0 1 N N N N N N -8.643 72.677 87.848 -10.591 -1.367 3.775 O15 Y66 59 Y66 O16 O8 O 0 1 N N N N N N -9.473 56.785 86.258 3.488 5.055 -2.769 O16 Y66 60 Y66 O17 O9 O 0 1 N N N N N N -10.348 56.938 81.972 6.614 6.217 0.127 O17 Y66 61 Y66 O2 O10 O 0 1 N N N N N N -9.116 56.761 80.212 7.678 5.748 1.689 O2 Y66 62 Y66 O3 O11 O 0 1 N N N N N N -8.214 61.709 84.797 2.025 2.207 -0.485 O3 Y66 63 Y66 O4 O12 O 0 1 N N N N N N -5.602 61.699 87.144 2.258 -1.447 -0.340 O4 Y66 64 Y66 O5 O13 O 0 1 N N N N N N -8.706 63.347 87.126 -0.261 1.202 -0.586 O5 Y66 65 Y66 O6 O14 O 0 1 N N N N N N -7.345 64.891 88.944 -1.880 -1.148 -0.254 O6 Y66 66 Y66 O7 O15 O 0 1 N N N N N N -5.302 64.988 90.346 -2.556 -3.570 -0.475 O7 Y66 67 Y66 O8 O16 O 0 1 N N N N N N -7.447 66.044 91.109 -3.432 -1.964 -2.214 O8 Y66 68 Y66 O9 O17 O 0 1 N N N N N N -6.072 66.930 89.198 -4.337 -1.936 0.254 O9 Y66 69 Y66 P1 P1 P 0 1 N N N N N N -6.536 65.691 90.022 -3.041 -2.185 -0.668 P1 Y66 70 Y66 P2 P2 P 0 1 N N N N N N -6.709 67.705 88.014 -5.621 -2.827 0.642 P2 Y66 71 Y66 S1 S1 S 0 1 Y N N N N N -4.945 50.327 87.252 8.054 -5.775 0.102 S1 Y66 72 Y66 H1 H1 H 0 1 N N N N N N -3.032 55.310 83.467 8.088 -1.036 0.633 H1 Y66 73 Y66 H2 H2 H 0 1 N N N N N N -7.761 58.139 79.424 7.991 3.982 2.740 H2 Y66 74 Y66 H3 H3 H 0 1 N N N N N N -4.674 56.522 82.106 8.194 1.376 1.105 H3 Y66 75 Y66 H4 H4 H 0 1 N N N N N N -8.119 55.537 81.838 7.749 3.972 -1.401 H4 Y66 76 Y66 H5 H5 H 0 1 N N N N N N -6.616 55.872 80.064 9.247 4.393 0.301 H5 Y66 77 Y66 H6 H6 H 0 1 N N N N N N -5.878 57.313 80.842 8.934 2.763 0.972 H6 Y66 78 Y66 H7 H7 H 0 1 N N N N N N -7.855 59.632 79.323 7.373 2.924 3.693 H7 Y66 79 Y66 H11 H11 H 0 1 N N N N N N -4.540 53.084 86.894 7.958 -2.803 0.148 H11 Y66 80 Y66 H12 H12 H 0 1 N N N N N N -2.644 48.124 89.185 8.680 -8.762 -1.394 H12 Y66 81 Y66 H13 H13 H 0 1 N N N N N N -3.916 49.175 89.896 7.575 -8.738 0.001 H13 Y66 82 Y66 H14 H14 H 0 1 N N N N N N -4.378 47.776 88.868 6.923 -8.898 -1.647 H14 Y66 83 Y66 H15 H15 H 0 1 N N N N N N -7.511 62.594 78.509 6.801 0.660 5.744 H15 Y66 84 Y66 H16 H16 H 0 1 N N N N N N -5.722 62.535 78.658 7.814 -0.518 4.875 H16 Y66 85 Y66 H17 H17 H 0 1 N N N N N N -6.609 61.155 77.926 8.354 1.170 5.040 H17 Y66 86 Y66 H18 H18 H 0 1 N N N N N N -6.253 64.078 81.175 5.190 -1.631 4.104 H18 Y66 87 Y66 H19 H19 H 0 1 N N N N N N -4.759 63.337 81.842 5.975 -2.213 2.616 H19 Y66 88 Y66 H20 H20 H 0 1 N N N N N N -5.061 63.311 80.071 6.966 -1.724 4.011 H20 Y66 89 Y66 H21 H21 H 0 1 N N N N N N -5.958 61.818 83.307 4.919 -0.549 1.199 H21 Y66 90 Y66 H23 H23 H 0 1 N N N N N N -7.002 59.504 85.872 4.385 -0.174 -0.406 H23 Y66 91 Y66 H24 H24 H 0 1 N N N N N N -5.522 59.960 84.962 4.023 1.002 -1.692 H24 Y66 92 Y66 H25 H25 H 0 1 N N N N N N -6.211 62.148 84.682 2.556 0.850 0.979 H25 Y66 93 Y66 H26 H26 H 0 1 N N N N N N -7.558 61.151 87.238 1.726 -0.090 -1.804 H26 Y66 94 Y66 H27 H27 H 0 1 N N N N N N -6.880 63.973 86.363 0.271 -0.155 0.878 H27 Y66 95 Y66 H28 H28 H 0 1 N N N N N N -7.091 62.843 89.177 -0.632 -1.043 -1.897 H28 Y66 96 Y66 H29 H29 H 0 1 N N N N N N -5.704 63.720 88.445 -0.106 -2.147 -0.605 H29 Y66 97 Y66 H30 H30 H 0 1 N N N N N N -5.638 69.989 87.615 -8.038 -3.082 2.287 H30 Y66 98 Y66 H31 H31 H 0 1 N N N N N N -5.350 69.980 89.388 -8.556 -2.804 0.607 H31 Y66 99 Y66 H32 H32 H 0 1 N N N N N N -7.573 71.286 89.557 -8.492 -0.650 2.772 H32 Y66 100 Y66 H33 H33 H 0 1 N N N N N N -6.995 73.999 88.505 -10.538 1.053 1.779 H33 Y66 101 Y66 H34 H34 H 0 1 N N N N N N -3.524 73.118 87.006 -9.871 -0.332 -1.701 H34 Y66 102 Y66 H35 H35 H 0 1 N N N N N N -6.123 77.946 90.240 -14.239 3.891 0.640 H35 Y66 103 Y66 H36 H36 H 0 1 N N N N N N -5.685 72.157 86.431 -11.654 -1.573 0.644 H36 Y66 104 Y66 H37 H37 H 0 1 N N N N N N -7.862 70.999 86.806 -10.429 -2.772 2.250 H37 Y66 105 Y66 H39 H39 H 0 1 N N N N N N -7.806 54.217 83.829 6.606 2.223 -2.763 H39 Y66 106 Y66 H40 H40 H 0 1 N N N N N N -6.161 52.976 85.162 6.497 -0.184 -3.258 H40 Y66 107 Y66 H42 H42 H 0 1 N N N N N N -10.629 56.068 84.273 4.930 6.601 -1.583 H42 Y66 108 Y66 H43 H43 H 0 1 N N N N N N -2.089 78.678 89.078 -12.792 2.548 -4.255 H43 Y66 109 Y66 H44 H44 H 0 1 N N N N N N -1.400 77.198 89.055 -13.971 3.693 -3.908 H44 Y66 110 Y66 H45 H45 H 0 1 N N N N N N -7.970 66.821 86.765 -4.909 -3.447 2.618 H45 Y66 111 Y66 H46 H46 H 0 1 N N N N N N -6.423 74.196 85.596 -13.014 -1.260 2.623 H46 Y66 112 Y66 H47 H47 H 0 1 N N N N N N -9.337 72.159 88.239 -11.467 -1.620 4.097 H47 Y66 113 Y66 H48 H48 H 0 1 N N N N N N -9.645 56.852 80.996 8.564 6.122 1.789 H48 Y66 114 Y66 H49 H49 H 0 1 N N N N N N -8.456 62.620 84.916 2.002 2.355 -1.441 H49 Y66 115 Y66 H50 H50 H 0 1 N N N N N N -5.551 61.902 88.071 2.281 -1.596 0.616 H50 Y66 116 Y66 H51 H51 H 0 1 N N N N N N -8.970 64.227 87.367 -0.284 1.351 -1.541 H51 Y66 117 Y66 H52 H52 H 0 1 N N N N N N -7.085 65.746 91.935 -3.758 -1.076 -2.414 H52 Y66 118 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y66 C15 C14 SING N N 1 Y66 C14 C13 DOUB Y N 2 Y66 C14 C16 SING Y N 3 Y66 C13 C12 SING Y N 4 Y66 O2 C11 SING N N 5 Y66 C11 C10 SING N N 6 Y66 C11 N4 SING N N 7 Y66 C10 C9 SING N N 8 Y66 C17 C16 SING N N 9 Y66 C16 C18 DOUB Y N 10 Y66 C12 N4 SING N N 11 Y66 C12 C19 DOUB Y N 12 Y66 N4 C38 SING N N 13 Y66 O17 C37 DOUB N N 14 Y66 C9 C38 SING N N 15 Y66 C9 C8 SING N N 16 Y66 C18 C19 SING Y N 17 Y66 C19 N5 SING N N 18 Y66 C38 C37 SING N N 19 Y66 C38 C35 SING N N 20 Y66 C7 C8 DOUB Y N 21 Y66 C7 C6 SING Y N 22 Y66 C37 N12 SING N N 23 Y66 C8 C39 SING Y N 24 Y66 C6 C5 DOUB Y N 25 Y66 C39 C40 DOUB Y N 26 Y66 N5 C35 SING N N 27 Y66 N5 C20 SING N N 28 Y66 C35 N11 DOUB N N 29 Y66 N12 C36 SING N N 30 Y66 C5 C40 SING Y N 31 Y66 C5 C4 SING N N 32 Y66 O3 C21 SING N N 33 Y66 O1 C4 DOUB N N 34 Y66 C20 C21 SING N N 35 Y66 N11 C36 SING N N 36 Y66 C36 O16 DOUB N N 37 Y66 C4 N3 SING N N 38 Y66 C21 C22 SING N N 39 Y66 O14 C33 SING N N 40 Y66 N2 C3 DOUB Y N 41 Y66 N2 N1 SING Y N 42 Y66 N3 C3 SING N N 43 Y66 C3 S1 SING Y N 44 Y66 C22 C23 SING N N 45 Y66 C22 O4 SING N N 46 Y66 C33 C34 SING N N 47 Y66 C33 C27 SING N N 48 Y66 O10 P2 DOUB N N 49 Y66 N1 C2 DOUB Y N 50 Y66 C23 O5 SING N N 51 Y66 C23 C24 SING N N 52 Y66 S1 C2 SING Y N 53 Y66 C34 O15 SING N N 54 Y66 C34 C26 SING N N 55 Y66 C28 N7 DOUB Y N 56 Y66 C28 N6 SING Y N 57 Y66 N7 C29 SING Y N 58 Y66 O11 P2 SING N N 59 Y66 C2 C1 SING N N 60 Y66 P2 O12 SING N N 61 Y66 P2 O9 SING N N 62 Y66 N6 C27 SING N N 63 Y66 N6 C32 SING Y N 64 Y66 C27 O13 SING N N 65 Y66 C29 C32 DOUB Y N 66 Y66 C29 C30 SING Y N 67 Y66 C24 O6 SING N N 68 Y66 C25 C26 SING N N 69 Y66 C25 O12 SING N N 70 Y66 C32 N10 SING Y N 71 Y66 N8 C30 SING N N 72 Y66 C26 O13 SING N N 73 Y66 C30 N9 DOUB Y N 74 Y66 O6 P1 SING N N 75 Y66 O9 P1 SING N N 76 Y66 N10 C31 DOUB Y N 77 Y66 N9 C31 SING Y N 78 Y66 P1 O7 DOUB N N 79 Y66 P1 O8 SING N N 80 Y66 C6 H1 SING N N 81 Y66 C11 H2 SING N N 82 Y66 C7 H3 SING N N 83 Y66 C9 H4 SING N N 84 Y66 C10 H5 SING N N 85 Y66 C10 H6 SING N N 86 Y66 C13 H7 SING N N 87 Y66 N3 H11 SING N N 88 Y66 C1 H12 SING N N 89 Y66 C1 H13 SING N N 90 Y66 C1 H14 SING N N 91 Y66 C15 H15 SING N N 92 Y66 C15 H16 SING N N 93 Y66 C15 H17 SING N N 94 Y66 C17 H18 SING N N 95 Y66 C17 H19 SING N N 96 Y66 C17 H20 SING N N 97 Y66 C18 H21 SING N N 98 Y66 C20 H23 SING N N 99 Y66 C20 H24 SING N N 100 Y66 C21 H25 SING N N 101 Y66 C22 H26 SING N N 102 Y66 C23 H27 SING N N 103 Y66 C24 H28 SING N N 104 Y66 C24 H29 SING N N 105 Y66 C25 H30 SING N N 106 Y66 C25 H31 SING N N 107 Y66 C26 H32 SING N N 108 Y66 C27 H33 SING N N 109 Y66 C28 H34 SING N N 110 Y66 C31 H35 SING N N 111 Y66 C33 H36 SING N N 112 Y66 C34 H37 SING N N 113 Y66 C39 H39 SING N N 114 Y66 C40 H40 SING N N 115 Y66 N12 H42 SING N N 116 Y66 N8 H43 SING N N 117 Y66 N8 H44 SING N N 118 Y66 O11 H45 SING N N 119 Y66 O14 H46 SING N N 120 Y66 O15 H47 SING N N 121 Y66 O2 H48 SING N N 122 Y66 O3 H49 SING N N 123 Y66 O4 H50 SING N N 124 Y66 O5 H51 SING N N 125 Y66 O8 H52 SING N N 126 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y66 SMILES ACDLabs 12.01 "Cc1nnc(NC(=O)c2ccc(cc2)C2CC(O)N3c4cc(C)c(C)cc4N(CC(O)C(O)C(O)COP(=O)(O)OP(=O)(O)OCC4OC(n5cnc6c(N)ncnc65)C(O)C4O)C4=NC(=O)NC(=O)C432)s1" Y66 InChI InChI 1.06 "InChI=1S/C40H46N12O17P2S/c1-16-8-22-23(9-17(16)2)52-27(55)10-21(19-4-6-20(7-5-19)34(59)45-39-49-48-18(3)72-39)40(52)36(46-38(61)47-37(40)60)50(22)11-24(53)29(56)25(54)12-66-70(62,63)69-71(64,65)67-13-26-30(57)31(58)35(68-26)51-15-44-28-32(41)42-14-43-33(28)51/h4-9,14-15,21,24-27,29-31,35,53-58H,10-13H2,1-3H3,(H,62,63)(H,64,65)(H2,41,42,43)(H,45,49,59)(H,47,60,61)/t21-,24+,25-,26+,27+,29+,30+,31+,35+,40-/m0/s1" Y66 InChIKey InChI 1.06 SKBAOTRWYXLZLI-ONKGDOPGSA-N Y66 SMILES_CANONICAL CACTVS 3.385 "Cc1sc(NC(=O)c2ccc(cc2)[C@@H]3C[C@@H](O)N4c5cc(C)c(C)cc5N(C[C@@H](O)[C@@H](O)[C@@H](O)CO[P](O)(=O)O[P](O)(=O)OC[C@H]6O[C@H]([C@H](O)[C@@H]6O)n7cnc8c(N)ncnc78)C9=NC(=O)NC(=O)[C@@]349)nn1" Y66 SMILES CACTVS 3.385 "Cc1sc(NC(=O)c2ccc(cc2)[CH]3C[CH](O)N4c5cc(C)c(C)cc5N(C[CH](O)[CH](O)[CH](O)CO[P](O)(=O)O[P](O)(=O)OC[CH]6O[CH]([CH](O)[CH]6O)n7cnc8c(N)ncnc78)C9=NC(=O)NC(=O)[C]349)nn1" Y66 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc2c(cc1C)N3[C@@H](C[C@H]([C@]34C(=O)NC(=O)N=C4N2C[C@H]([C@H]([C@H](COP(=O)(O)OP(=O)(O)OC[C@@H]5[C@H]([C@H]([C@@H](O5)n6cnc7c6ncnc7N)O)O)O)O)O)c8ccc(cc8)C(=O)Nc9nnc(s9)C)O" Y66 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc2c(cc1C)N3C(CC(C34C(=O)NC(=O)N=C4N2CC(C(C(COP(=O)(O)OP(=O)(O)OCC5C(C(C(O5)n6cnc7c6ncnc7N)O)O)O)O)O)c8ccc(cc8)C(=O)Nc9nnc(s9)C)O" # _pdbx_chem_comp_identifier.comp_id Y66 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2S,3R,4R)-2,3,4-trihydroxy-5-[(1R,3S,3aS,13R)-1-hydroxy-10,11-dimethyl-3-{4-[(5-methyl-1,3,4-thiadiazol-2-yl)carbamoyl]phenyl}-4,6-dioxo-2,3,5,6-tetrahydro-1H-benzo[g]pyrrolo[2,1-e]pteridin-8(4H)-yl]pentyl dihydrogen diphosphate (non-preferred name)" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y66 "Create component" 2023-01-06 RCSB Y66 "Initial release" 2024-06-26 RCSB #