data_Y6T # _chem_comp.id Y6T _chem_comp.name "(2~{S})-3-cyclohexyl-2-[(2~{R},3~{R},4~{S},5~{S},6~{R})-2-[(1~{R},2~{R},3~{S},5~{R})-3-ethyl-2-[(2~{S},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-5-[3-[1-[3-oxidanylidene-3-[(3,6,8-trisulfonaphthalen-1-yl)amino]propyl]-1,2,3-triazol-4-yl]propylcarbamoyl]cyclohexyl]oxy-6-(hydroxymethyl)-5-oxidanyl-3-(phenylcarbonyloxy)oxan-4-yl]oxy-propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C55 H73 N5 O25 S3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-11-23 _chem_comp.pdbx_modified_date 2024-10-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 1300.382 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y6T _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8R5L _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y6T C4 C1 C 0 1 N N R N N N -14.911 -36.593 49.689 7.787 2.853 -0.071 C4 Y6T 1 Y6T C14 C2 C 0 1 N N N N N N -12.585 -33.361 45.149 7.589 -1.045 4.420 C14 Y6T 2 Y6T C5 C3 C 0 1 N N S N N N -16.570 -36.734 47.969 10.153 2.484 -0.161 C5 Y6T 3 Y6T C6 C4 C 0 1 N N S N N N -17.448 -35.829 47.061 11.362 2.216 0.739 C6 Y6T 4 Y6T C11 C5 C 0 1 N N R N N N -13.617 -35.688 49.752 6.576 2.031 0.374 C11 Y6T 5 Y6T C7 C6 C 0 1 N N R N N N -16.600 -35.122 46.059 11.274 0.789 1.289 C7 Y6T 6 Y6T C8 C7 C 0 1 N N S N N N -15.720 -36.073 45.294 11.193 -0.193 0.116 C8 Y6T 7 Y6T C9 C8 C 0 1 N N S N N N -14.899 -36.902 46.238 9.991 0.168 -0.760 C9 Y6T 8 Y6T C10 C9 C 0 1 N N N N N N -14.047 -37.916 45.500 9.938 -0.772 -1.966 C10 Y6T 9 Y6T C12 C10 C 0 1 N N R N N N -11.838 -35.281 48.210 6.258 -0.254 1.027 C12 Y6T 10 Y6T C13 C11 C 0 1 N N R N N N -11.705 -34.030 46.199 6.634 -1.130 3.227 C13 Y6T 11 Y6T N1 N1 N 0 1 N N N N N N -15.036 -33.648 53.923 2.667 3.908 -0.504 N1 Y6T 12 Y6T C3 C12 C 0 1 N N S N N N -15.676 -36.845 50.973 7.552 4.328 0.263 C3 Y6T 13 Y6T C1 C13 C 0 1 N N N N N N -17.229 -38.542 52.171 8.565 6.612 0.227 C1 Y6T 14 Y6T C2 C14 C 0 1 N N N N N N -16.121 -38.362 51.096 8.763 5.151 -0.182 C2 Y6T 15 Y6T O1 O1 O 0 1 N N N N N N -15.785 -35.902 48.792 8.954 2.390 0.610 O1 Y6T 16 Y6T O2 O2 O 0 1 N N N N N N -18.125 -34.895 47.844 11.365 3.147 1.824 O2 Y6T 17 Y6T O3 O3 O 0 1 N N N N N N -17.487 -34.437 45.150 12.434 0.506 2.073 O3 Y6T 18 Y6T O4 O4 O 0 1 N N N N N N -16.531 -36.910 44.487 12.391 -0.111 -0.659 O4 Y6T 19 Y6T O5 O5 O 0 1 N N N N N N -15.783 -37.569 47.149 10.120 1.517 -1.213 O5 Y6T 20 Y6T O6 O6 O 0 1 N N N N N N -12.633 -36.261 48.922 6.795 0.654 0.062 O6 Y6T 21 Y6T O7 O7 O 0 1 N N N N N N -12.477 -34.857 47.048 7.096 -0.270 2.184 O7 Y6T 22 Y6T O8 O8 O 0 1 N N N N N N -13.159 -32.177 45.712 7.547 0.273 4.970 O8 Y6T 23 Y6T C15 C15 C 0 1 N N S N N N -10.625 -34.879 45.571 6.585 -2.572 2.714 C15 Y6T 24 Y6T O9 O9 O 0 1 N N N N N N -11.173 -35.891 44.753 7.902 -2.996 2.356 O9 Y6T 25 Y6T C16 C16 C 0 1 N N S N N N -9.736 -35.434 46.685 5.674 -2.637 1.484 C16 Y6T 26 Y6T O10 O10 O 0 1 N N N N N N -8.970 -36.506 46.144 5.681 -3.964 0.954 O10 Y6T 27 Y6T C17 C17 C 0 1 N N S N N N -7.543 -36.376 46.171 4.706 -4.829 1.541 C17 Y6T 28 Y6T C18 C18 C 0 1 N N N N N N -7.099 -35.530 45.018 5.357 -5.670 2.608 C18 Y6T 29 Y6T O11 O11 O 0 1 N N N N N N -7.823 -35.447 43.994 6.535 -5.542 2.842 O11 Y6T 30 Y6T O12 O12 O 0 1 N N N N N N -6.011 -34.874 45.076 4.628 -6.561 3.298 O12 Y6T 31 Y6T C19 C19 C 0 1 N N N N N N -6.886 -37.796 46.134 4.117 -5.740 0.461 C19 Y6T 32 Y6T C20 C20 C 0 1 N N N N N N -5.452 -37.755 46.731 3.316 -4.899 -0.535 C20 Y6T 33 Y6T C21 C21 C 0 1 N N N N N N -4.661 -38.960 46.298 2.084 -4.319 0.162 C21 Y6T 34 Y6T C22 C22 C 0 1 N N N N N N -3.198 -38.859 46.813 1.283 -3.479 -0.835 C22 Y6T 35 Y6T C23 C23 C 0 1 N N N N N N -3.132 -38.785 48.339 0.840 -4.359 -2.005 C23 Y6T 36 Y6T C24 C24 C 0 1 N N N N N N -4.039 -37.662 48.884 2.073 -4.939 -2.702 C24 Y6T 37 Y6T C25 C25 C 0 1 N N N N N N -5.479 -37.714 48.260 2.874 -5.780 -1.705 C25 Y6T 38 Y6T C26 C26 C 0 1 N N R N N N -10.480 -35.915 47.951 6.194 -1.660 0.425 C26 Y6T 39 Y6T O13 O13 O 0 1 N N N N N N -9.756 -35.539 49.137 5.296 -1.659 -0.716 O13 Y6T 40 Y6T C27 C27 C 0 1 N N N N N N -8.576 -36.255 49.569 5.862 -1.666 -1.939 C27 Y6T 41 Y6T C28 C28 C 0 1 Y N N N N N -7.505 -35.465 50.403 5.013 -1.597 -3.146 C28 Y6T 42 Y6T C29 C29 C 0 1 Y N N N N N -6.501 -36.214 51.303 5.587 -1.698 -4.415 C29 Y6T 43 Y6T C30 C30 C 0 1 Y N N N N N -5.575 -35.508 52.050 4.788 -1.633 -5.537 C30 Y6T 44 Y6T C31 C31 C 0 1 Y N N N N N -5.548 -33.987 51.989 3.421 -1.467 -5.408 C31 Y6T 45 Y6T C32 C32 C 0 1 Y N N N N N -6.439 -33.320 51.201 2.845 -1.366 -4.154 C32 Y6T 46 Y6T C33 C33 C 0 1 Y N N N N N -7.477 -34.110 50.358 3.631 -1.435 -3.023 C33 Y6T 47 Y6T O14 O14 O 0 1 N N N N N N -8.429 -37.433 49.332 7.070 -1.729 -2.049 O14 Y6T 48 Y6T C34 C34 C 0 1 N N N N N N -13.069 -35.492 51.124 5.326 2.526 -0.355 C34 Y6T 49 Y6T C35 C35 C 0 1 N N R N N N -14.230 -35.144 52.000 5.092 4.001 -0.021 C35 Y6T 50 Y6T C36 C36 C 0 1 N N N N N N -13.903 -34.418 53.315 3.860 4.489 -0.740 C36 Y6T 51 Y6T O25 O15 O 0 1 N N N N N N -12.784 -34.479 53.840 3.943 5.405 -1.530 O25 Y6T 52 Y6T C55 C37 C 0 1 N N N N N N -14.921 -36.461 52.195 6.302 4.824 -0.466 C55 Y6T 53 Y6T O87 O16 O 0 1 N N N N N N -25.682 -27.582 51.065 -12.406 -4.759 -0.655 O87 Y6T 54 Y6T S70 S1 S 0 1 N N N N N N -24.675 -26.635 51.474 -12.952 -3.915 0.350 S70 Y6T 55 Y6T O88 O17 O 0 1 N N N N N N -23.591 -26.877 50.562 -14.337 -3.613 0.442 O88 Y6T 56 Y6T O89 O18 O 0 1 N N N N N N -25.189 -25.351 51.075 -12.555 -4.525 1.686 O89 Y6T 57 Y6T C83 C38 C 0 1 Y N N N N N -24.231 -26.747 53.193 -12.115 -2.371 0.212 C83 Y6T 58 Y6T C84 C39 C 0 1 Y N N N N N -24.021 -25.615 53.957 -12.709 -1.241 0.684 C84 Y6T 59 Y6T C85 C40 C 0 1 Y N N N N N -23.681 -25.736 55.327 -12.044 -0.008 0.576 C85 Y6T 60 Y6T C86 C41 C 0 1 Y N N N N N -23.469 -24.538 56.103 -12.628 1.179 1.052 C86 Y6T 61 Y6T C87 C42 C 0 1 Y N N N N N -23.138 -24.636 57.435 -11.961 2.360 0.933 C87 Y6T 62 Y6T S90 S2 S 0 1 N N N N N N -22.865 -23.133 58.424 -12.706 3.839 1.535 S90 Y6T 63 Y6T O91 O19 O 0 1 N N N N N N -23.995 -22.236 58.476 -14.107 3.605 1.553 O91 Y6T 64 Y6T O92 O20 O 0 1 N N N N N N -22.555 -23.378 59.810 -12.279 4.000 2.987 O92 Y6T 65 Y6T O93 O21 O 0 1 N N N N N N -21.768 -22.313 57.966 -12.105 4.910 0.820 O93 Y6T 66 Y6T C88 C43 C 0 1 Y N N N N N -23.006 -25.863 58.035 -10.701 2.418 0.345 C88 Y6T 67 Y6T C89 C44 C 0 1 Y N N N N N -24.117 -27.999 53.740 -10.852 -2.325 -0.374 C89 Y6T 68 Y6T C90 C45 C 0 1 Y N N N N N -23.782 -28.223 55.085 -10.178 -1.147 -0.496 C90 Y6T 69 Y6T S98 S3 S 0 1 N N N N N N -23.693 -29.897 55.611 -8.582 -1.113 -1.241 S98 Y6T 70 Y6T O96 O22 O 0 1 N N N N N N -24.270 -30.841 54.689 -8.754 -0.551 -2.534 O96 Y6T 71 Y6T O97 O23 O 0 1 N N N N N N -22.366 -30.405 55.808 -7.697 -0.572 -0.269 O97 Y6T 72 Y6T O98 O24 O 0 1 N N N N N N -24.382 -30.181 56.836 -8.153 -2.558 -1.454 O98 Y6T 73 Y6T C91 C46 C 0 1 Y N N N N N -23.547 -27.067 55.955 -10.762 0.039 -0.025 C91 Y6T 74 Y6T C92 C47 C 0 1 Y N N N N N -23.207 -27.070 57.359 -10.094 1.278 -0.135 C92 Y6T 75 Y6T N71 N2 N 0 1 N N N N N N -23.008 -28.315 58.093 -8.830 1.347 -0.724 N71 Y6T 76 Y6T C93 C48 C 0 1 N N N N N N -21.645 -28.811 58.343 -7.814 1.945 -0.070 C93 Y6T 77 Y6T O99 O25 O 0 1 N N N N N N -20.670 -28.184 57.921 -8.019 2.503 0.987 O99 Y6T 78 Y6T C70 C49 C 0 1 N N N N N N -21.454 -30.131 59.101 -6.425 1.921 -0.654 C70 Y6T 79 Y6T C94 C50 C 0 1 N N N N N N -20.215 -30.132 60.011 -5.467 2.665 0.279 C94 Y6T 80 Y6T N70 N3 N 0 1 Y N N N N N -19.161 -30.955 59.460 -4.117 2.641 -0.288 N70 Y6T 81 Y6T C95 C51 C 0 1 Y N N N N N -18.447 -30.701 58.309 -3.341 3.722 -0.535 C95 Y6T 82 Y6T N98 N4 N 0 1 Y N N N N N -18.686 -32.137 59.994 -3.462 1.588 -0.632 N98 Y6T 83 Y6T N99 N5 N 0 1 Y N N N N N -17.675 -32.617 59.163 -2.307 1.915 -1.094 N99 Y6T 84 Y6T C97 C52 C 0 1 Y N N N N N -17.517 -31.734 58.126 -2.183 3.246 -1.048 C97 Y6T 85 Y6T C96 C53 C 0 1 N N N N N N -16.509 -31.856 56.934 -0.990 4.056 -1.487 C96 Y6T 86 Y6T C98 C54 C 0 1 N N N N N N -16.286 -33.044 55.942 0.260 3.560 -0.757 C98 Y6T 87 Y6T C99 C55 C 0 1 N N N N N N -14.928 -32.901 55.183 1.470 4.383 -1.202 C99 Y6T 88 Y6T H7 H1 H 0 1 N N N N N N -14.623 -37.562 49.256 7.926 2.742 -1.146 H7 Y6T 89 Y6T H22 H2 H 0 1 N N N N N N -13.386 -34.051 44.844 7.287 -1.766 5.179 H22 Y6T 90 Y6T H23 H3 H 0 1 N N N N N N -11.977 -33.095 44.272 8.603 -1.269 4.089 H23 Y6T 91 Y6T H8 H4 H 0 1 N N N N N N -17.242 -37.346 48.589 10.233 3.484 -0.589 H8 Y6T 92 Y6T H9 H5 H 0 1 N N N N N N -18.165 -36.472 46.530 12.279 2.329 0.161 H9 Y6T 93 Y6T H19 H6 H 0 1 N N N N N N -13.895 -34.702 49.352 6.437 2.142 1.450 H19 Y6T 94 Y6T H11 H7 H 0 1 N N N N N N -15.965 -34.390 46.579 10.382 0.692 1.908 H11 Y6T 95 Y6T H13 H8 H 0 1 N N N N N N -15.040 -35.487 44.658 11.074 -1.207 0.498 H13 Y6T 96 Y6T H15 H9 H 0 1 N N N N N N -14.231 -36.233 46.800 9.074 0.066 -0.179 H15 Y6T 97 Y6T H16 H10 H 0 1 N N N N N N -13.462 -38.501 46.225 9.898 -1.805 -1.620 H16 Y6T 98 Y6T H18 H11 H 0 1 N N N N N N -14.697 -38.590 44.923 9.050 -0.553 -2.559 H18 Y6T 99 Y6T H17 H12 H 0 1 N N N N N N -13.363 -37.392 44.816 10.828 -0.628 -2.578 H17 Y6T 100 Y6T H20 H13 H 0 1 N N N N N N -11.679 -34.416 48.871 5.255 0.067 1.309 H20 Y6T 101 Y6T H21 H14 H 0 1 N N N N N N -11.222 -33.241 46.793 5.636 -0.821 3.538 H21 Y6T 102 Y6T H51 H15 H 0 1 N N N N N N -15.914 -33.643 53.444 2.601 3.176 0.129 H51 Y6T 103 Y6T H6 H16 H 0 1 N N N N N N -16.596 -36.244 50.938 7.413 4.439 1.339 H6 Y6T 104 Y6T H2 H17 H 0 1 N N N N N N -17.514 -39.603 52.231 8.461 6.675 1.310 H2 Y6T 105 Y6T H3 H18 H 0 1 N N N N N N -16.849 -38.209 53.148 9.427 7.198 -0.091 H3 Y6T 106 Y6T H1 H19 H 0 1 N N N N N N -18.108 -37.941 51.895 7.665 7.003 -0.248 H1 Y6T 107 Y6T H4 H20 H 0 1 N N N N N N -16.507 -38.702 50.124 9.663 4.759 0.292 H4 Y6T 108 Y6T H5 H21 H 0 1 N N N N N N -15.248 -38.970 51.377 8.866 5.087 -1.265 H5 Y6T 109 Y6T H10 H22 H 0 1 N N N N N N -18.665 -35.347 48.482 11.414 4.072 1.548 H10 Y6T 110 Y6T H12 H23 H 0 1 N N N N N N -18.040 -33.838 45.638 12.550 1.096 2.830 H12 Y6T 111 Y6T H14 H24 H 0 1 N N N N N N -15.980 -37.513 44.002 12.408 -0.708 -1.420 H14 Y6T 112 Y6T H24 H25 H 0 1 N N N N N N -13.710 -31.753 45.064 8.130 0.399 5.732 H24 Y6T 113 Y6T H25 H26 H 0 1 N N N N N N -10.001 -34.219 44.951 6.191 -3.223 3.494 H25 Y6T 114 Y6T H26 H27 H 0 1 N N N N N N -10.471 -36.407 44.373 8.534 -2.975 3.087 H26 Y6T 115 Y6T H27 H28 H 0 1 N N N N N N -9.052 -34.630 46.993 4.659 -2.361 1.768 H27 Y6T 116 Y6T H28 H29 H 0 1 N N N N N N -7.235 -35.886 47.107 3.910 -4.231 1.985 H28 Y6T 117 Y6T H52 H30 H 0 1 N N N N N N -5.896 -34.379 44.274 5.090 -7.078 3.972 H52 Y6T 118 Y6T H30 H31 H 0 1 N N N N N N -7.501 -38.494 46.721 4.925 -6.252 -0.062 H30 Y6T 119 Y6T H29 H32 H 0 1 N N N N N N -6.833 -38.142 45.091 3.461 -6.476 0.926 H29 Y6T 120 Y6T H31 H33 H 0 1 N N N N N N -4.950 -36.848 46.364 3.939 -4.086 -0.907 H31 Y6T 121 Y6T H32 H34 H 0 1 N N N N N N -5.128 -39.867 46.708 1.461 -5.133 0.534 H32 Y6T 122 Y6T H33 H35 H 0 1 N N N N N N -4.656 -39.015 45.199 2.399 -3.692 0.996 H33 Y6T 123 Y6T H34 H36 H 0 1 N N N N N N -2.641 -39.746 46.476 0.405 -3.066 -0.338 H34 Y6T 124 Y6T H35 H37 H 0 1 N N N N N N -2.735 -37.954 46.393 1.906 -2.665 -1.207 H35 Y6T 125 Y6T H36 H38 H 0 1 N N N N N N -3.461 -39.747 48.759 0.217 -5.172 -1.633 H36 Y6T 126 Y6T H37 H39 H 0 1 N N N N N N -2.094 -38.587 48.644 0.270 -3.760 -2.715 H37 Y6T 127 Y6T H38 H40 H 0 1 N N N N N N -3.583 -36.690 48.645 1.758 -5.566 -3.536 H38 Y6T 128 Y6T H39 H41 H 0 1 N N N N N N -4.121 -37.770 49.976 2.696 -4.126 -3.074 H39 Y6T 129 Y6T H40 H42 H 0 1 N N N N N N -6.035 -36.820 48.579 3.752 -6.193 -2.202 H40 Y6T 130 Y6T H41 H43 H 0 1 N N N N N N -5.991 -38.615 48.628 2.251 -6.593 -1.333 H41 Y6T 131 Y6T H42 H44 H 0 1 N N N N N N -10.594 -37.008 47.903 7.190 -1.965 0.105 H42 Y6T 132 Y6T H43 H45 H 0 1 N N N N N N -6.521 -37.293 51.350 6.655 -1.827 -4.516 H43 Y6T 133 Y6T H44 H46 H 0 1 N N N N N N -4.871 -36.036 52.676 5.231 -1.712 -6.519 H44 Y6T 134 Y6T H45 H47 H 0 1 N N N N N N -4.823 -33.436 52.570 2.800 -1.416 -6.291 H45 Y6T 135 Y6T H46 H48 H 0 1 N N N N N N -6.423 -32.241 51.163 1.777 -1.237 -4.061 H46 Y6T 136 Y6T H47 H49 H 0 1 N N N N N N -8.179 -33.578 49.733 3.180 -1.360 -2.045 H47 Y6T 137 Y6T H48 H50 H 0 1 N N N N N N -12.590 -36.417 51.478 5.465 2.415 -1.431 H48 Y6T 138 Y6T H49 H51 H 0 1 N N N N N N -12.333 -34.674 51.126 4.464 1.940 -0.038 H49 Y6T 139 Y6T H50 H52 H 0 1 N N N N N N -14.904 -34.493 51.424 4.953 4.112 1.054 H50 Y6T 140 Y6T H69 H53 H 0 1 N N N N N N -15.620 -36.380 53.041 6.135 5.874 -0.228 H69 Y6T 141 Y6T H68 H54 H 0 1 N N N N N N -14.170 -37.234 52.413 6.441 4.713 -1.542 H68 Y6T 142 Y6T H84 H55 H 0 1 N N N N N N -24.116 -24.637 53.509 -13.687 -1.292 1.140 H84 Y6T 143 Y6T H85 H56 H 0 1 N N N N N N -23.570 -23.568 55.640 -13.605 1.154 1.512 H85 Y6T 144 Y6T H86 H57 H 0 1 N N N N N N -22.734 -25.898 59.080 -10.193 3.367 0.263 H86 Y6T 145 Y6T H87 H58 H 0 1 N N N N N N -24.294 -28.855 53.105 -10.400 -3.236 -0.737 H87 Y6T 146 Y6T H88 H59 H 0 1 N N N N N N -23.797 -28.831 58.426 -8.683 0.964 -1.603 H88 Y6T 147 Y6T H90 H60 H 0 1 N N N N N N -22.344 -30.310 59.722 -6.095 0.887 -0.763 H90 Y6T 148 Y6T H89 H61 H 0 1 N N N N N N -21.350 -30.944 58.367 -6.432 2.405 -1.630 H89 Y6T 149 Y6T H91 H62 H 0 1 N N N N N N -19.847 -29.101 60.117 -5.797 3.698 0.388 H91 Y6T 150 Y6T H92 H63 H 0 1 N N N N N N -20.496 -30.524 61.000 -5.460 2.181 1.255 H92 Y6T 151 Y6T H93 H64 H 0 1 N N N N N N -18.581 -29.850 57.658 -3.596 4.757 -0.359 H93 Y6T 152 Y6T H95 H65 H 0 1 N N N N N N -15.523 -31.698 57.395 -0.851 3.945 -2.562 H95 Y6T 153 Y6T H94 H66 H 0 1 N N N N N N -16.751 -31.002 56.285 -1.157 5.107 -1.248 H94 Y6T 154 Y6T H97 H67 H 0 1 N N N N N N -17.106 -33.058 55.209 0.121 3.671 0.319 H97 Y6T 155 Y6T H96 H68 H 0 1 N N N N N N -16.283 -33.988 56.507 0.427 2.510 -0.995 H96 Y6T 156 Y6T H99 H69 H 0 1 N N N N N N -14.112 -33.315 55.794 1.303 5.434 -0.964 H99 Y6T 157 Y6T H98 H70 H 0 1 N N N N N N -14.727 -31.840 54.973 1.609 4.272 -2.278 H98 Y6T 158 Y6T H53 H71 H 0 1 N N N N N N -24.686 -25.023 50.339 -12.963 -5.383 1.864 H53 Y6T 159 Y6T H54 H72 H 0 1 N N N N N N -21.739 -22.946 60.034 -12.636 4.789 3.417 H54 Y6T 160 Y6T H55 H73 H 0 1 N N N N N N -25.002 -30.887 56.695 -7.282 -2.654 -1.862 H55 Y6T 161 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y6T O11 C18 DOUB N N 1 Y6T O4 C8 SING N N 2 Y6T O9 C15 SING N N 3 Y6T C18 O12 SING N N 4 Y6T C18 C17 SING N N 5 Y6T C14 O8 SING N N 6 Y6T C14 C13 SING N N 7 Y6T O3 C7 SING N N 8 Y6T C8 C7 SING N N 9 Y6T C8 C9 SING N N 10 Y6T C10 C9 SING N N 11 Y6T C15 C13 SING N N 12 Y6T C15 C16 SING N N 13 Y6T C7 C6 SING N N 14 Y6T C19 C17 SING N N 15 Y6T C19 C20 SING N N 16 Y6T O10 C17 SING N N 17 Y6T O10 C16 SING N N 18 Y6T C13 O7 SING N N 19 Y6T C9 O5 SING N N 20 Y6T C21 C20 SING N N 21 Y6T C21 C22 SING N N 22 Y6T C16 C26 SING N N 23 Y6T C20 C25 SING N N 24 Y6T C22 C23 SING N N 25 Y6T O7 C12 SING N N 26 Y6T C6 O2 SING N N 27 Y6T C6 C5 SING N N 28 Y6T O5 C5 SING N N 29 Y6T C26 C12 SING N N 30 Y6T C26 O13 SING N N 31 Y6T C5 O1 SING N N 32 Y6T C12 O6 SING N N 33 Y6T C25 C24 SING N N 34 Y6T C23 C24 SING N N 35 Y6T O1 C4 SING N N 36 Y6T O6 C11 SING N N 37 Y6T O13 C27 SING N N 38 Y6T O14 C27 DOUB N N 39 Y6T C27 C28 SING N N 40 Y6T C4 C11 SING N N 41 Y6T C4 C3 SING N N 42 Y6T C11 C34 SING N N 43 Y6T C33 C28 DOUB Y N 44 Y6T C33 C32 SING Y N 45 Y6T C28 C29 SING Y N 46 Y6T O88 S70 DOUB N N 47 Y6T C3 C2 SING N N 48 Y6T C3 C55 SING N N 49 Y6T O87 S70 DOUB N N 50 Y6T O89 S70 SING N N 51 Y6T C2 C1 SING N N 52 Y6T C34 C35 SING N N 53 Y6T C32 C31 DOUB Y N 54 Y6T C29 C30 DOUB Y N 55 Y6T S70 C83 SING N N 56 Y6T C31 C30 SING Y N 57 Y6T C35 C55 SING N N 58 Y6T C35 C36 SING N N 59 Y6T C83 C89 DOUB Y N 60 Y6T C83 C84 SING Y N 61 Y6T C36 O25 DOUB N N 62 Y6T C36 N1 SING N N 63 Y6T C89 C90 SING Y N 64 Y6T N1 C99 SING N N 65 Y6T C84 C85 DOUB Y N 66 Y6T O96 S98 DOUB N N 67 Y6T C90 S98 SING N N 68 Y6T C90 C91 DOUB Y N 69 Y6T C99 C98 SING N N 70 Y6T C85 C91 SING Y N 71 Y6T C85 C86 SING Y N 72 Y6T S98 O97 DOUB N N 73 Y6T S98 O98 SING N N 74 Y6T C98 C96 SING N N 75 Y6T C91 C92 SING Y N 76 Y6T C86 C87 DOUB Y N 77 Y6T C96 C97 SING N N 78 Y6T C92 C88 DOUB Y N 79 Y6T C92 N71 SING N N 80 Y6T C87 C88 SING Y N 81 Y6T C87 S90 SING N N 82 Y6T O99 C93 DOUB N N 83 Y6T O93 S90 DOUB N N 84 Y6T N71 C93 SING N N 85 Y6T C97 C95 DOUB Y N 86 Y6T C97 N99 SING Y N 87 Y6T C95 N70 SING Y N 88 Y6T C93 C70 SING N N 89 Y6T S90 O91 DOUB N N 90 Y6T S90 O92 SING N N 91 Y6T C70 C94 SING N N 92 Y6T N99 N98 DOUB Y N 93 Y6T N70 N98 SING Y N 94 Y6T N70 C94 SING N N 95 Y6T C4 H7 SING N N 96 Y6T C14 H22 SING N N 97 Y6T C14 H23 SING N N 98 Y6T C5 H8 SING N N 99 Y6T C6 H9 SING N N 100 Y6T C11 H19 SING N N 101 Y6T C7 H11 SING N N 102 Y6T C8 H13 SING N N 103 Y6T C9 H15 SING N N 104 Y6T C10 H16 SING N N 105 Y6T C10 H18 SING N N 106 Y6T C10 H17 SING N N 107 Y6T C12 H20 SING N N 108 Y6T C13 H21 SING N N 109 Y6T N1 H51 SING N N 110 Y6T C3 H6 SING N N 111 Y6T C1 H2 SING N N 112 Y6T C1 H3 SING N N 113 Y6T C1 H1 SING N N 114 Y6T C2 H4 SING N N 115 Y6T C2 H5 SING N N 116 Y6T O2 H10 SING N N 117 Y6T O3 H12 SING N N 118 Y6T O4 H14 SING N N 119 Y6T O8 H24 SING N N 120 Y6T C15 H25 SING N N 121 Y6T O9 H26 SING N N 122 Y6T C16 H27 SING N N 123 Y6T C17 H28 SING N N 124 Y6T O12 H52 SING N N 125 Y6T C19 H30 SING N N 126 Y6T C19 H29 SING N N 127 Y6T C20 H31 SING N N 128 Y6T C21 H32 SING N N 129 Y6T C21 H33 SING N N 130 Y6T C22 H34 SING N N 131 Y6T C22 H35 SING N N 132 Y6T C23 H36 SING N N 133 Y6T C23 H37 SING N N 134 Y6T C24 H38 SING N N 135 Y6T C24 H39 SING N N 136 Y6T C25 H40 SING N N 137 Y6T C25 H41 SING N N 138 Y6T C26 H42 SING N N 139 Y6T C29 H43 SING N N 140 Y6T C30 H44 SING N N 141 Y6T C31 H45 SING N N 142 Y6T C32 H46 SING N N 143 Y6T C33 H47 SING N N 144 Y6T C34 H48 SING N N 145 Y6T C34 H49 SING N N 146 Y6T C35 H50 SING N N 147 Y6T C55 H69 SING N N 148 Y6T C55 H68 SING N N 149 Y6T C84 H84 SING N N 150 Y6T C86 H85 SING N N 151 Y6T C88 H86 SING N N 152 Y6T C89 H87 SING N N 153 Y6T N71 H88 SING N N 154 Y6T C70 H90 SING N N 155 Y6T C70 H89 SING N N 156 Y6T C94 H91 SING N N 157 Y6T C94 H92 SING N N 158 Y6T C95 H93 SING N N 159 Y6T C96 H95 SING N N 160 Y6T C96 H94 SING N N 161 Y6T C98 H97 SING N N 162 Y6T C98 H96 SING N N 163 Y6T C99 H99 SING N N 164 Y6T C99 H98 SING N N 165 Y6T O89 H53 SING N N 166 Y6T O92 H54 SING N N 167 Y6T O98 H55 SING N N 168 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y6T InChI InChI 1.06 "InChI=1S/C55H73N5O25S3/c1-3-30-20-33(51(67)56-17-10-15-34-26-60(59-58-34)18-16-42(62)57-37-24-35(86(71,72)73)21-32-22-36(87(74,75)76)25-41(43(32)37)88(77,78)79)23-38(48(30)85-54-47(66)46(65)44(63)28(2)80-54)82-55-50(84-53(70)31-13-8-5-9-14-31)49(45(64)40(27-61)83-55)81-39(52(68)69)19-29-11-6-4-7-12-29/h5,8-9,13-14,21-22,24-26,28-30,33,38-40,44-50,54-55,61,63-66H,3-4,6-7,10-12,15-20,23,27H2,1-2H3,(H,56,67)(H,57,62)(H,68,69)(H,71,72,73)(H,74,75,76)(H,77,78,79)/t28-,30-,33+,38+,39-,40+,44+,45-,46+,47-,48+,49-,50+,54-,55+/m0/s1" Y6T InChIKey InChI 1.06 KCVSXMVECGDAAA-MKYNXKBWSA-N Y6T SMILES_CANONICAL CACTVS 3.385 "CC[C@H]1C[C@H](C[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@@H](CC3CCCCC3)C(O)=O)[C@H]2OC(=O)c4ccccc4)[C@@H]1O[C@@H]5O[C@@H](C)[C@@H](O)[C@@H](O)[C@@H]5O)C(=O)NCCCc6cn(CCC(=O)Nc7cc(cc8cc(cc(c78)[S](O)(=O)=O)[S](O)(=O)=O)[S](O)(=O)=O)nn6" Y6T SMILES CACTVS 3.385 "CC[CH]1C[CH](C[CH](O[CH]2O[CH](CO)[CH](O)[CH](O[CH](CC3CCCCC3)C(O)=O)[CH]2OC(=O)c4ccccc4)[CH]1O[CH]5O[CH](C)[CH](O)[CH](O)[CH]5O)C(=O)NCCCc6cn(CCC(=O)Nc7cc(cc8cc(cc(c78)[S](O)(=O)=O)[S](O)(=O)=O)[S](O)(=O)=O)nn6" Y6T SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC[C@H]1C[C@H](C[C@H]([C@@H]1O[C@H]2[C@H]([C@@H]([C@@H]([C@@H](O2)C)O)O)O)O[C@H]3[C@@H]([C@H]([C@H]([C@H](O3)CO)O)O[C@@H](CC4CCCCC4)C(=O)O)OC(=O)c5ccccc5)C(=O)NCCCc6cn(nn6)CCC(=O)Nc7cc(cc8c7c(cc(c8)S(=O)(=O)O)S(=O)(=O)O)S(=O)(=O)O" Y6T SMILES "OpenEye OEToolkits" 2.0.7 "CCC1CC(CC(C1OC2C(C(C(C(O2)C)O)O)O)OC3C(C(C(C(O3)CO)O)OC(CC4CCCCC4)C(=O)O)OC(=O)c5ccccc5)C(=O)NCCCc6cn(nn6)CCC(=O)Nc7cc(cc8c7c(cc(c8)S(=O)(=O)O)S(=O)(=O)O)S(=O)(=O)O" # _pdbx_chem_comp_identifier.comp_id Y6T _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-3-cyclohexyl-2-[(2~{R},3~{R},4~{S},5~{S},6~{R})-2-[(1~{R},2~{R},3~{S},5~{R})-3-ethyl-2-[(2~{S},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-5-[3-[1-[3-oxidanylidene-3-[(3,6,8-trisulfonaphthalen-1-yl)amino]propyl]-1,2,3-triazol-4-yl]propylcarbamoyl]cyclohexyl]oxy-6-(hydroxymethyl)-5-oxidanyl-3-(phenylcarbonyloxy)oxan-4-yl]oxy-propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y6T "Create component" 2023-11-23 PDBE Y6T "Initial release" 2024-10-23 RCSB #