data_Y77 # _chem_comp.id Y77 _chem_comp.name "[(~{Z})-5-[(azanylidene-$l^{4}-azanylidene)amino]-3-methyl-pent-2-enyl] dihydrogen phosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H13 N3 O4 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-02-09 _chem_comp.pdbx_modified_date 2021-12-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 222.159 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y77 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 7LNW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y77 C01 C1 C 0 1 N N N -8.409 -25.513 -4.314 ? ? ? C01 Y77 1 Y77 C02 C2 C 0 1 N N N -7.139 -24.849 -4.916 ? ? ? C02 Y77 2 Y77 C03 C3 C 0 1 N N N -6.312 -25.601 -5.740 ? ? ? C03 Y77 3 Y77 C04 C4 C 0 1 N N N -6.739 -25.683 -7.109 ? ? ? C04 Y77 4 Y77 C08 C5 C 0 1 N N N -6.842 -23.500 -4.619 ? ? ? C08 Y77 5 Y77 C09 C6 C 0 1 N N N -5.591 -22.818 -5.197 ? ? ? C09 Y77 6 Y77 N05 N1 N 0 1 N N N -5.698 -25.300 -7.913 ? ? ? N05 Y77 7 Y77 N06 N2 N 0 1 N N N -5.716 -25.516 -9.426 ? ? ? N06 Y77 8 Y77 N07 N3 N 0 1 N N N -5.716 -25.752 -11.138 ? ? ? N07 Y77 9 Y77 O10 O1 O 0 1 N N N -5.427 -21.649 -4.639 ? ? ? O10 Y77 10 Y77 O12 O2 O 0 1 N N N -3.019 -21.416 -3.753 ? ? ? O12 Y77 11 Y77 O13 O3 O 0 1 N N N -3.992 -19.367 -4.508 ? ? ? O13 Y77 12 Y77 O14 O4 O 0 1 N N N -3.236 -21.141 -6.091 ? ? ? O14 Y77 13 Y77 P11 P1 P 0 1 N N N -3.846 -20.884 -4.729 ? ? ? P11 Y77 14 Y77 H1 H1 H 0 1 N N N -8.945 -24.782 -3.691 ? ? ? H1 Y77 15 Y77 H2 H2 H 0 1 N N N -9.066 -25.853 -5.128 ? ? ? H2 Y77 16 Y77 H3 H3 H 0 1 N N N -8.115 -26.375 -3.697 ? ? ? H3 Y77 17 Y77 H4 H4 H 0 1 N N N -6.263 -26.623 -5.335 ? ? ? H4 Y77 18 Y77 H5 H5 H 0 1 N N N -5.309 -25.150 -5.721 ? ? ? H5 Y77 19 Y77 H6 H6 H 0 1 N N N -7.598 -25.015 -7.270 ? ? ? H6 Y77 20 Y77 H7 H7 H 0 1 N N N -7.030 -26.717 -7.346 ? ? ? H7 Y77 21 Y77 H8 H8 H 0 1 N N N -7.504 -22.939 -3.976 ? ? ? H8 Y77 22 Y77 H9 H9 H 0 1 N N N -5.713 -22.690 -6.283 ? ? ? H9 Y77 23 Y77 H10 H10 H 0 1 N N N -4.709 -23.444 -4.998 ? ? ? H10 Y77 24 Y77 H11 H11 H 0 1 N N N -4.858 -25.455 -11.557 ? ? ? H11 Y77 25 Y77 H12 H12 H 0 1 N N N -2.262 -21.818 -4.163 ? ? ? H12 Y77 26 Y77 H13 H13 H 0 1 N N N -3.669 -18.903 -5.272 ? ? ? H13 Y77 27 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y77 N07 N06 DOUB N N 1 Y77 N06 N05 DOUB N N 2 Y77 N05 C04 SING N N 3 Y77 C04 C03 SING N N 4 Y77 O14 P11 DOUB N N 5 Y77 C03 C02 SING N N 6 Y77 C09 O10 SING N N 7 Y77 C09 C08 SING N N 8 Y77 C02 C08 DOUB N Z 9 Y77 C02 C01 SING N N 10 Y77 P11 O10 SING N N 11 Y77 P11 O13 SING N N 12 Y77 P11 O12 SING N N 13 Y77 C01 H1 SING N N 14 Y77 C01 H2 SING N N 15 Y77 C01 H3 SING N N 16 Y77 C03 H4 SING N N 17 Y77 C03 H5 SING N N 18 Y77 C04 H6 SING N N 19 Y77 C04 H7 SING N N 20 Y77 C08 H8 SING N N 21 Y77 C09 H9 SING N N 22 Y77 C09 H10 SING N N 23 Y77 N07 H11 SING N N 24 Y77 O12 H12 SING N N 25 Y77 O13 H13 SING N N 26 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y77 InChI InChI 1.03 "InChI=1S/C6H13N3O4P/c1-6(2-4-8-9-7)3-5-13-14(10,11)12/h3,7H,2,4-5H2,1H3,(H2,10,11,12)/b6-3-" Y77 InChIKey InChI 1.03 SCRLLCVSAUXFQL-UTCJRWHESA-N Y77 SMILES_CANONICAL CACTVS 3.385 "C\C(CCN=[N]=N)=C\CO[P](O)(O)=O" Y77 SMILES CACTVS 3.385 "CC(CCN=[N]=N)=CCO[P](O)(O)=O" Y77 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C/C(=C/COP(=O)(O)O)/CCN=[N]=N" Y77 SMILES "OpenEye OEToolkits" 2.0.7 "CC(=CCOP(=O)(O)O)CCN=[N]=N" # _pdbx_chem_comp_identifier.comp_id Y77 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(~{Z})-5-[(azanylidene-$l^{4}-azanylidene)amino]-3-methyl-pent-2-enyl] dihydrogen phosphate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y77 "Create component" 2021-02-09 RCSB Y77 "Initial release" 2021-12-22 RCSB ##