data_Y7E # _chem_comp.id Y7E _chem_comp.name "(3S)-3-{2-[6-(4-acetylpiperazin-1-yl)-4-oxoquinazolin-3(4H)-yl]acetamido}-N-methyl-3-(4-nitrophenyl)propanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H29 N7 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-12 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 535.552 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y7E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G6F _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y7E C13 C1 C 0 1 N N N N N N -14.232 7.316 52.353 -6.556 -3.945 2.506 C13 Y7E 1 Y7E C15 C2 C 0 1 N N N N N N -15.358 12.469 48.167 -0.823 -0.407 -2.046 C15 Y7E 2 Y7E C18 C3 C 0 1 Y N N N N N -16.684 14.747 42.537 4.968 -0.599 0.031 C18 Y7E 3 Y7E C19 C4 C 0 1 Y N N N N N -18.076 15.043 42.848 5.176 -1.935 -0.308 C19 Y7E 4 Y7E C20 C5 C 0 1 Y N N N N N -18.568 14.778 44.110 4.189 -2.670 -0.901 C20 Y7E 5 Y7E C21 C6 C 0 1 Y N N N N N -15.849 14.180 43.510 3.751 0.009 -0.228 C21 Y7E 6 Y7E C23 C7 C 0 1 N N N N N N -14.758 14.576 40.958 7.189 -0.701 0.833 C23 Y7E 7 Y7E C24 C8 C 0 1 N N N N N N -14.465 14.768 39.487 8.217 0.073 1.664 C24 Y7E 8 Y7E C26 C9 C 0 1 N N N N N N -16.818 14.260 38.915 7.295 2.203 0.671 C26 Y7E 9 Y7E C27 C10 C 0 1 N N N N N N -17.067 14.114 40.391 6.303 1.345 -0.121 C27 Y7E 10 Y7E C28 C11 C 0 1 Y N N N N N -16.358 13.914 44.735 2.736 -0.728 -0.832 C28 Y7E 11 Y7E C1 C12 C 0 1 Y N N N N N -11.321 9.579 44.927 -6.750 1.656 -1.182 C1 Y7E 12 Y7E C2 C13 C 0 1 Y N N N N N -11.566 8.480 44.069 -7.275 2.173 -0.013 C2 Y7E 13 Y7E C3 C14 C 0 1 Y N N N N N -12.526 7.491 44.317 -6.728 1.819 1.206 C3 Y7E 14 Y7E C4 C15 C 0 1 Y N N N N N -13.294 7.613 45.491 -5.656 0.948 1.256 C4 Y7E 15 Y7E C5 C16 C 0 1 Y N N N N N -13.088 8.742 46.374 -5.130 0.432 0.087 C5 Y7E 16 Y7E C6 C17 C 0 1 Y N N N N N -12.119 9.711 46.084 -5.677 0.785 -1.132 C6 Y7E 17 Y7E C7 C18 C 0 1 N N R N N N -13.940 8.818 47.649 -3.961 -0.518 0.141 C7 Y7E 18 Y7E C8 C19 C 0 1 N N N N N N -13.117 8.077 48.756 -4.464 -1.955 -0.007 C8 Y7E 19 Y7E C9 C20 C 0 1 N N N N N N -14.040 7.819 49.967 -5.285 -2.328 1.200 C9 Y7E 20 Y7E N10 N1 N 0 1 N N N N N N -13.436 7.599 51.174 -5.758 -3.583 1.332 N10 Y7E 21 Y7E O11 O1 O 0 1 N N N N N N -15.269 7.788 49.877 -5.519 -1.499 2.054 O11 Y7E 22 Y7E N12 N2 N 0 1 N N N N N N -14.168 10.184 48.154 -3.031 -0.210 -0.948 N12 Y7E 23 Y7E C14 C21 C 0 1 N N N N N N -15.137 10.990 47.579 -1.750 -0.624 -0.877 C14 Y7E 24 Y7E O16 O2 O 0 1 N N N N N N -15.801 10.541 46.602 -1.344 -1.169 0.126 O16 Y7E 25 Y7E N17 N3 N 0 1 N N N N N N -16.097 13.103 47.069 0.502 -0.941 -1.723 N17 Y7E 26 Y7E N22 N4 N 0 1 N N N N N N -16.165 14.943 41.229 5.992 0.130 0.643 N22 Y7E 27 Y7E N25 N5 N 0 1 N N N N N N -15.404 14.028 38.630 8.458 1.372 1.018 N25 Y7E 28 Y7E C29 C22 C 0 1 Y N N N N N -17.696 14.198 45.056 2.952 -2.082 -1.175 C29 Y7E 29 Y7E N30 N6 N 0 1 N N N N N N -18.214 13.928 46.325 1.948 -2.780 -1.763 N30 Y7E 30 Y7E C31 C23 C 0 1 N N N N N N -17.458 13.396 47.265 0.798 -2.235 -2.017 C31 Y7E 31 Y7E C32 C24 C 0 1 N N N N N N -15.486 13.342 45.772 1.422 -0.141 -1.134 C32 Y7E 32 Y7E O33 O3 O 0 1 N N N N N N -14.306 13.087 45.606 1.171 1.020 -0.865 O33 Y7E 33 Y7E C34 C25 C 0 1 N N N N N N -14.969 12.990 37.754 9.712 1.790 0.751 C34 Y7E 34 Y7E C35 C26 C 0 1 N N N N N N -13.482 12.891 37.472 9.943 3.175 0.203 C35 Y7E 35 Y7E O36 O4 O 0 1 N N N N N N -15.781 12.183 37.224 10.653 1.052 0.951 O36 Y7E 36 Y7E N37 N7 N 1 1 N N N N N N -10.735 8.359 42.863 -8.424 3.105 -0.067 N37 Y7E 37 Y7E O38 O5 O 0 1 N N N N N N -10.925 7.401 42.097 -8.906 3.417 -1.141 O38 Y7E 38 Y7E O39 O6 O -1 1 N N N N N N -9.912 9.199 42.705 -8.887 3.560 0.964 O39 Y7E 39 Y7E H51 H1 H 0 1 N N N N N N -13.568 7.170 53.218 -6.847 -4.993 2.438 H51 Y7E 40 Y7E H49 H2 H 0 1 N N N N N N -14.909 8.160 52.549 -5.965 -3.791 3.409 H49 Y7E 41 Y7E H50 H3 H 0 1 N N N N N N -14.823 6.403 52.186 -7.449 -3.321 2.545 H50 Y7E 42 Y7E H52 H4 H 0 1 N N N N N N -15.950 12.450 49.094 -1.218 -0.921 -2.922 H52 Y7E 43 Y7E H53 H5 H 0 1 N N N N N N -14.400 12.976 48.354 -0.745 0.660 -2.254 H53 Y7E 44 Y7E H54 H6 H 0 1 N N N N N N -18.721 15.468 42.093 6.131 -2.395 -0.100 H54 Y7E 45 Y7E H55 H7 H 0 1 N N N N N N -19.592 15.008 44.366 4.365 -3.703 -1.159 H55 Y7E 46 Y7E H56 H8 H 0 1 N N N N N N -14.816 13.959 43.285 3.591 1.044 0.035 H56 Y7E 47 Y7E H57 H9 H 0 1 N N N N N N -14.090 15.217 41.552 7.617 -0.948 -0.138 H57 Y7E 48 Y7E H58 H10 H 0 1 N N N N N N -14.594 13.523 41.231 6.916 -1.618 1.355 H58 Y7E 49 Y7E H59 H11 H 0 1 N N N N N N -14.538 15.839 39.249 7.830 0.232 2.671 H59 Y7E 50 Y7E H60 H12 H 0 1 N N N N N N -13.444 14.415 39.281 9.149 -0.490 1.712 H60 Y7E 51 Y7E H61 H13 H 0 1 N N N N N N -17.094 15.276 38.596 7.617 3.047 0.061 H61 Y7E 52 Y7E H62 H14 H 0 1 N N N N N N -17.427 13.526 38.367 6.819 2.569 1.580 H62 Y7E 53 Y7E H64 H15 H 0 1 N N N N N N -16.924 13.058 40.665 5.388 1.912 -0.292 H64 Y7E 54 Y7E H63 H16 H 0 1 N N N N N N -18.106 14.410 40.600 6.744 1.070 -1.079 H63 Y7E 55 Y7E H40 H17 H 0 1 N N N N N N -10.545 10.296 44.703 -7.180 1.929 -2.135 H40 Y7E 56 Y7E H41 H18 H 0 1 N N N N N N -12.672 6.667 43.634 -7.139 2.224 2.120 H41 Y7E 57 Y7E H42 H19 H 0 1 N N N N N N -14.035 6.866 45.732 -5.228 0.673 2.209 H42 Y7E 58 Y7E H43 H20 H 0 1 N N N N N N -11.983 10.556 46.743 -5.266 0.382 -2.046 H43 Y7E 59 Y7E H44 H21 H 0 1 N N N N N N -14.896 8.296 47.492 -3.449 -0.409 1.098 H44 Y7E 60 Y7E H46 H22 H 0 1 N N N N N N -12.745 7.119 48.363 -5.080 -2.033 -0.903 H46 Y7E 61 Y7E H45 H23 H 0 1 N N N N N N -12.266 8.701 49.065 -3.613 -2.631 -0.091 H45 Y7E 62 Y7E H47 H24 H 0 1 N N N N N N -12.439 7.633 51.244 -5.571 -4.246 0.649 H47 Y7E 63 Y7E H48 H25 H 0 1 N N N N N N -13.620 10.531 48.916 -3.337 0.291 -1.720 H48 Y7E 64 Y7E H65 H26 H 0 1 N N N N N N -17.902 13.176 48.225 0.037 -2.840 -2.486 H65 Y7E 65 Y7E H68 H27 H 0 1 N N N N N N -13.294 12.055 36.782 9.000 3.720 0.182 H68 Y7E 66 Y7E H66 H28 H 0 1 N N N N N N -13.132 13.829 37.015 10.655 3.703 0.838 H66 Y7E 67 Y7E H67 H29 H 0 1 N N N N N N -12.941 12.718 38.414 10.343 3.103 -0.809 H67 Y7E 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y7E C1 C6 DOUB Y N 1 Y7E C1 C2 SING Y N 2 Y7E C2 N37 SING N N 3 Y7E C2 C3 DOUB Y N 4 Y7E C3 C4 SING Y N 5 Y7E C4 C5 DOUB Y N 6 Y7E C5 C6 SING Y N 7 Y7E C5 C7 SING N N 8 Y7E C7 C8 SING N N 9 Y7E C7 N12 SING N N 10 Y7E C8 C9 SING N N 11 Y7E C9 N10 SING N N 12 Y7E C9 O11 DOUB N N 13 Y7E N10 C13 SING N N 14 Y7E N12 C14 SING N N 15 Y7E C14 C15 SING N N 16 Y7E C14 O16 DOUB N N 17 Y7E C15 N17 SING N N 18 Y7E N17 C31 SING N N 19 Y7E N17 C32 SING N N 20 Y7E C18 C19 DOUB Y N 21 Y7E C18 C21 SING Y N 22 Y7E C18 N22 SING N N 23 Y7E C19 C20 SING Y N 24 Y7E C20 C29 DOUB Y N 25 Y7E C21 C28 DOUB Y N 26 Y7E N22 C23 SING N N 27 Y7E N22 C27 SING N N 28 Y7E C23 C24 SING N N 29 Y7E C24 N25 SING N N 30 Y7E N25 C26 SING N N 31 Y7E N25 C34 SING N N 32 Y7E C26 C27 SING N N 33 Y7E C28 C29 SING Y N 34 Y7E C28 C32 SING N N 35 Y7E C29 N30 SING N N 36 Y7E N30 C31 DOUB N N 37 Y7E C32 O33 DOUB N N 38 Y7E C34 C35 SING N N 39 Y7E C34 O36 DOUB N N 40 Y7E N37 O38 DOUB N N 41 Y7E N37 O39 SING N N 42 Y7E C13 H51 SING N N 43 Y7E C13 H49 SING N N 44 Y7E C13 H50 SING N N 45 Y7E C15 H52 SING N N 46 Y7E C15 H53 SING N N 47 Y7E C19 H54 SING N N 48 Y7E C20 H55 SING N N 49 Y7E C21 H56 SING N N 50 Y7E C23 H57 SING N N 51 Y7E C23 H58 SING N N 52 Y7E C24 H59 SING N N 53 Y7E C24 H60 SING N N 54 Y7E C26 H61 SING N N 55 Y7E C26 H62 SING N N 56 Y7E C27 H64 SING N N 57 Y7E C27 H63 SING N N 58 Y7E C1 H40 SING N N 59 Y7E C3 H41 SING N N 60 Y7E C4 H42 SING N N 61 Y7E C6 H43 SING N N 62 Y7E C7 H44 SING N N 63 Y7E C8 H46 SING N N 64 Y7E C8 H45 SING N N 65 Y7E N10 H47 SING N N 66 Y7E N12 H48 SING N N 67 Y7E C31 H65 SING N N 68 Y7E C35 H68 SING N N 69 Y7E C35 H66 SING N N 70 Y7E C35 H67 SING N N 71 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y7E SMILES ACDLabs 12.01 "O=C(C)N1CCN(CC1)c1cc2C(=O)N(CC(=O)NC(CC(=O)NC)c3ccc(cc3)[N+]([O-])=O)C=Nc2cc1" Y7E InChI InChI 1.06 "InChI=1S/C26H29N7O6/c1-17(34)30-9-11-31(12-10-30)20-7-8-22-21(13-20)26(37)32(16-28-22)15-25(36)29-23(14-24(35)27-2)18-3-5-19(6-4-18)33(38)39/h3-8,13,16,23H,9-12,14-15H2,1-2H3,(H,27,35)(H,29,36)" Y7E InChIKey InChI 1.06 CAJKWQNVIJCHQF-UHFFFAOYSA-N Y7E SMILES_CANONICAL CACTVS 3.385 "CNC(=O)C[C@@H](NC(=O)CN1C=Nc2ccc(cc2C1=O)N3CCN(CC3)C(C)=O)c4ccc(cc4)[N+]([O-])=O" Y7E SMILES CACTVS 3.385 "CNC(=O)C[CH](NC(=O)CN1C=Nc2ccc(cc2C1=O)N3CCN(CC3)C(C)=O)c4ccc(cc4)[N+]([O-])=O" Y7E SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N1CCN(CC1)c2ccc3c(c2)C(=O)N(C=N3)CC(=O)N[C@H](CC(=O)NC)c4ccc(cc4)[N+](=O)[O-]" Y7E SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)N1CCN(CC1)c2ccc3c(c2)C(=O)N(C=N3)CC(=O)NC(CC(=O)NC)c4ccc(cc4)[N+](=O)[O-]" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Y7E "SYSTEMATIC NAME" ACDLabs 12.01 "(3S)-3-{2-[6-(4-acetylpiperazin-1-yl)-4-oxoquinazolin-3(4H)-yl]acetamido}-N-methyl-3-(4-nitrophenyl)propanamide" Y7E "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{R})-3-[2-[6-(4-ethanoylpiperazin-1-yl)-4-oxidanylidene-quinazolin-3-yl]ethanoylamino]-~{N}-methyl-3-(4-nitrophenyl)propanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y7E "Create component" 2023-06-12 RCSB Y7E "Initial release" 2024-12-18 RCSB #