data_Y7F # _chem_comp.id Y7F _chem_comp.name "2-methyl-~{N}-[[5-(3-thiophen-2-yl-1,2,4-oxadiazol-5-yl)thiophen-2-yl]methyl]pyrazole-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H13 N5 O2 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-11-23 _chem_comp.pdbx_modified_date 2024-10-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 371.437 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y7F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8R6J _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y7F C14 C1 C 0 1 Y N N N N N 5.431 44.927 9.270 1.041 -1.461 0.136 C14 Y7F 1 Y7F C16 C2 C 0 1 Y N N N N N 5.475 44.963 7.878 2.461 -1.183 0.386 C16 Y7F 2 Y7F C13 C3 C 0 1 Y N N N N N 6.477 44.912 10.177 0.336 -2.507 0.657 C13 Y7F 3 Y7F C12 C4 C 0 1 Y N N N N N 6.102 44.876 11.517 -0.981 -2.529 0.256 C12 Y7F 4 Y7F C11 C5 C 0 1 Y N N N N N 4.736 44.878 11.771 -1.341 -1.536 -0.563 C11 Y7F 5 Y7F C10 C6 C 0 1 N N N N N N 3.987 44.839 13.115 -2.726 -1.355 -1.129 C10 Y7F 6 Y7F C02 C7 C 0 1 N N N N N N 1.709 43.960 12.469 -4.798 -0.224 -0.526 C02 Y7F 7 Y7F C03 C8 C 0 1 Y N N N N N 0.770 42.771 12.366 -5.559 0.704 0.325 C03 Y7F 8 Y7F C04 C9 C 0 1 Y N N N N N 1.189 41.492 12.033 -5.145 1.263 1.522 C04 Y7F 9 Y7F C05 C10 C 0 1 Y N N N N N 0.064 40.696 12.016 -6.208 2.066 1.942 C05 Y7F 10 Y7F C08 C11 C 0 1 N N N N N N -1.397 43.852 12.878 -7.640 0.867 -1.076 C08 Y7F 11 Y7F C19 C12 C 0 1 Y N N N N N 6.143 45.032 5.829 4.410 -0.329 0.395 C19 Y7F 12 Y7F C21 C13 C 0 1 Y N N N N N 6.950 45.089 4.707 5.571 0.547 0.136 C21 Y7F 13 Y7F C22 C14 C 0 1 Y N N N N N 8.329 45.236 4.662 6.807 0.372 0.645 C22 Y7F 14 Y7F C23 C15 C 0 1 Y N N N N N 8.878 45.266 3.391 7.730 1.321 0.259 C23 Y7F 15 Y7F C24 C16 C 0 1 Y N N N N N 7.975 45.149 2.345 7.259 2.268 -0.560 C24 Y7F 16 Y7F N06 N1 N 0 1 Y N N N N N -0.969 41.462 12.317 -7.160 1.972 1.049 N06 Y7F 17 Y7F N07 N2 N 0 1 Y N N N N N -0.542 42.735 12.525 -6.814 1.191 0.090 N07 Y7F 18 Y7F N09 N3 N 0 1 N N N N N N 3.028 43.751 13.038 -3.519 -0.521 -0.222 N09 Y7F 19 Y7F N18 N4 N 0 1 Y N N N N N 4.824 44.997 5.795 4.397 -1.397 1.156 N18 Y7F 20 Y7F N20 N5 N 0 1 Y N N N N N 6.544 45.015 7.093 3.166 -0.177 -0.107 N20 Y7F 21 Y7F O01 O1 O 0 1 N N N N N N 1.372 45.019 12.053 -5.323 -0.723 -1.503 O01 Y7F 22 Y7F O17 O2 O 0 1 Y N N N N N 4.391 44.952 7.082 3.292 -1.897 1.164 O17 Y7F 23 Y7F S15 S1 S 0 1 Y N N N N N 3.995 44.902 10.218 -0.025 -0.497 -0.877 S15 Y7F 24 Y7F S25 S2 S 0 1 Y N N N N N 6.417 45.006 3.070 5.557 1.975 -0.891 S25 Y7F 25 Y7F H131 H1 H 0 0 N N N N N N 7.511 44.927 9.867 0.768 -3.244 1.317 H131 Y7F 26 Y7F H121 H2 H 0 0 N N N N N N 6.831 44.848 12.313 -1.673 -3.292 0.580 H121 Y7F 27 Y7F H101 H3 H 0 0 N N N N N N 3.464 45.792 13.283 -2.659 -0.871 -2.104 H101 Y7F 28 Y7F H102 H4 H 0 0 N N N N N N 4.696 44.660 13.937 -3.203 -2.329 -1.239 H102 Y7F 29 Y7F H041 H5 H 0 0 N N N N N N 2.202 41.180 11.827 -4.201 1.111 2.024 H041 Y7F 30 Y7F H051 H6 H 0 0 N N N N N N 0.033 39.639 11.797 -6.239 2.660 2.844 H051 Y7F 31 Y7F H081 H7 H 0 0 N N N N N N -2.439 43.508 12.950 -8.299 0.033 -0.834 H081 Y7F 32 Y7F H083 H8 H 0 0 N N N N N N -1.079 44.265 13.847 -8.239 1.736 -1.349 H083 Y7F 33 Y7F H082 H9 H 0 0 N N N N N N -1.321 44.631 12.105 -6.997 0.592 -1.912 H082 Y7F 34 Y7F H221 H10 H 0 0 N N N N N N 8.931 45.321 5.554 7.056 -0.447 1.304 H221 Y7F 35 Y7F H231 H11 H 0 0 N N N N N N 9.940 45.373 3.225 8.757 1.301 0.593 H231 Y7F 36 Y7F H241 H12 H 0 0 N N N N N N 8.202 45.148 1.289 7.839 3.087 -0.961 H241 Y7F 37 Y7F H091 H13 H 0 0 N N N N N N 3.280 42.846 13.381 -3.123 -0.183 0.596 H091 Y7F 38 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y7F C02 O01 DOUB N N 1 Y7F C04 C03 DOUB Y N 2 Y7F C05 C04 SING Y N 3 Y7F N06 C05 DOUB Y N 4 Y7F N07 N06 SING Y N 5 Y7F C08 N07 SING N N 6 Y7F C03 C02 SING N N 7 Y7F N09 C02 SING N N 8 Y7F C10 N09 SING N N 9 Y7F C11 C10 SING N N 10 Y7F C12 C11 DOUB Y N 11 Y7F C13 C12 SING Y N 12 Y7F C14 C13 DOUB Y N 13 Y7F S15 C14 SING Y N 14 Y7F C16 C14 SING N N 15 Y7F O17 C16 SING Y N 16 Y7F N18 O17 SING Y N 17 Y7F C19 N18 DOUB Y N 18 Y7F N20 C19 SING Y N 19 Y7F C21 C19 SING N N 20 Y7F C22 C21 DOUB Y N 21 Y7F C23 C22 SING Y N 22 Y7F C24 C23 DOUB Y N 23 Y7F S25 C24 SING Y N 24 Y7F C03 N07 SING Y N 25 Y7F C11 S15 SING Y N 26 Y7F C16 N20 DOUB Y N 27 Y7F C21 S25 SING Y N 28 Y7F C13 H131 SING N N 29 Y7F C12 H121 SING N N 30 Y7F C10 H101 SING N N 31 Y7F C10 H102 SING N N 32 Y7F C04 H041 SING N N 33 Y7F C05 H051 SING N N 34 Y7F C08 H081 SING N N 35 Y7F C08 H083 SING N N 36 Y7F C08 H082 SING N N 37 Y7F C22 H221 SING N N 38 Y7F C23 H231 SING N N 39 Y7F C24 H241 SING N N 40 Y7F N09 H091 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y7F InChI InChI 1.06 "InChI=1S/C16H13N5O2S2/c1-21-11(6-7-18-21)15(22)17-9-10-4-5-13(25-10)16-19-14(20-23-16)12-3-2-8-24-12/h2-8H,9H2,1H3,(H,17,22)" Y7F InChIKey InChI 1.06 SIGJKWVCBZYUFS-UHFFFAOYSA-N Y7F SMILES_CANONICAL CACTVS 3.385 "Cn1nccc1C(=O)NCc2sc(cc2)c3onc(n3)c4sccc4" Y7F SMILES CACTVS 3.385 "Cn1nccc1C(=O)NCc2sc(cc2)c3onc(n3)c4sccc4" Y7F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cn1c(ccn1)C(=O)NCc2ccc(s2)c3nc(no3)c4cccs4" Y7F SMILES "OpenEye OEToolkits" 2.0.7 "Cn1c(ccn1)C(=O)NCc2ccc(s2)c3nc(no3)c4cccs4" # _pdbx_chem_comp_identifier.comp_id Y7F _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-methyl-~{N}-[[5-(3-thiophen-2-yl-1,2,4-oxadiazol-5-yl)thiophen-2-yl]methyl]pyrazole-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y7F "Create component" 2023-11-23 PDBE Y7F "Initial release" 2024-10-30 RCSB #