data_Y7G # _chem_comp.id Y7G _chem_comp.name "(1S,2S)-2-((S)-2-(((((1R,2S,4S)-bicyclo[2.2.1]heptan-2-yl)methoxy)carbonyl)amino)-4-methylpentanamido)-1-hydroxy-3-((S)-2-oxopyrrolidin-3-yl)propane-1-sulfonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H37 N3 O8 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-02-09 _chem_comp.pdbx_modified_date 2021-02-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 503.609 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y7G _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7LKS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y7G C02 C1 C 0 1 N N N 10.962 23.982 26.124 2.728 -0.441 0.002 C02 Y7G 1 Y7G C04 C2 C 0 1 N N S 12.149 22.160 27.285 0.350 0.029 0.248 C04 Y7G 2 Y7G C05 C3 C 0 1 N N N 13.269 21.980 28.280 0.293 1.339 1.037 C05 Y7G 3 Y7G C06 C4 C 0 1 N N N 14.649 22.300 27.754 1.438 1.373 2.052 C06 Y7G 4 Y7G C07 C5 C 0 1 N N N 15.058 21.345 26.654 1.457 2.732 2.754 C07 Y7G 5 Y7G C08 C6 C 0 1 N N N 15.679 22.278 28.912 1.232 0.267 3.089 C08 Y7G 6 Y7G C09 C7 C 0 1 N N N 10.856 21.518 27.785 -0.846 -0.059 -0.665 C09 Y7G 7 Y7G C11 C8 C 0 1 N N S 8.997 19.829 27.634 -3.253 -0.129 -1.036 C11 Y7G 8 Y7G C12 C9 C 0 1 N N N 7.977 19.699 26.438 -4.462 -0.634 -0.245 C12 Y7G 9 Y7G C13 C10 C 0 1 N N S 7.567 21.051 25.868 -4.186 -2.052 0.258 C13 Y7G 10 Y7G C14 C11 C 0 1 N N N 6.573 20.974 24.712 -5.361 -2.568 1.059 C14 Y7G 11 Y7G C16 C12 C 0 1 N N N 5.729 22.669 26.136 -4.738 -4.306 -0.350 C16 Y7G 12 Y7G C17 C13 C 0 1 N N N 6.841 21.956 26.875 -4.077 -3.036 -0.930 C17 Y7G 13 Y7G C19 C14 C 0 1 N N S 9.238 18.443 28.267 -3.561 1.256 -1.609 C19 Y7G 14 Y7G C23 C15 C 0 1 N N N 9.790 25.785 25.243 5.056 -0.959 -0.073 C23 Y7G 15 Y7G C24 C16 C 0 1 N N S 10.056 27.333 25.428 6.225 -0.932 -1.060 C24 Y7G 16 Y7G C25 C17 C 0 1 N N R 8.843 28.243 25.373 7.490 -1.584 -0.422 C25 Y7G 17 Y7G C26 C18 C 0 1 N N N 8.008 27.902 24.134 7.598 -0.930 0.989 C26 Y7G 18 Y7G C27 C19 C 0 1 N N N 8.913 28.183 23.008 8.011 0.533 0.711 C27 Y7G 19 Y7G C28 C20 C 0 1 N N S 10.113 28.886 23.633 8.115 0.625 -0.842 C28 Y7G 20 Y7G C29 C21 C 0 1 N N N 9.531 29.544 24.896 8.627 -0.834 -1.200 C29 Y7G 21 Y7G C30 C22 C 0 1 N N N 10.974 27.809 24.302 6.644 0.526 -1.359 C30 Y7G 22 Y7G N03 N1 N 0 1 N N N 11.929 23.588 26.993 1.577 -0.008 -0.550 N03 Y7G 23 Y7G N10 N2 N 0 1 N N N 10.253 20.441 27.158 -2.091 -0.043 -0.148 N10 Y7G 24 Y7G N15 N3 N 0 1 N N N 5.558 21.895 24.899 -5.651 -3.829 0.695 N15 Y7G 25 Y7G O01 O1 O 0 1 N N N 10.243 23.266 25.433 2.746 -0.802 1.163 O01 Y7G 26 Y7G O18 O2 O 0 1 N N N 6.700 20.200 23.777 -5.954 -1.936 1.907 O18 Y7G 27 Y7G O20 O3 O 0 1 N N N 7.985 17.955 28.749 -4.762 1.196 -2.381 O20 Y7G 28 Y7G O21 O4 O 0 1 N N N 10.330 21.971 28.795 -0.688 -0.144 -1.864 O21 Y7G 29 Y7G O22 O5 O 0 1 N N N 10.776 25.332 26.017 3.855 -0.480 -0.733 O22 Y7G 30 Y7G H1 H1 H 0 1 N N N 12.437 21.654 26.352 0.341 -0.812 0.941 H1 Y7G 31 Y7G H2 H2 H 0 1 N N N 13.071 22.637 29.139 0.391 2.181 0.351 H2 Y7G 32 Y7G H3 H3 H 0 1 N N N 13.265 20.931 28.612 -0.660 1.407 1.561 H3 Y7G 33 Y7G H4 H4 H 0 1 N N N 14.632 23.318 27.338 2.385 1.216 1.537 H4 Y7G 34 Y7G H5 H5 H 0 1 N N N 16.065 21.607 26.296 0.510 2.889 3.269 H5 Y7G 35 Y7G H6 H6 H 0 1 N N N 15.064 20.317 27.045 2.272 2.756 3.477 H6 Y7G 36 Y7G H7 H7 H 0 1 N N N 14.343 21.417 25.822 1.604 3.520 2.015 H7 Y7G 37 Y7G H8 H8 H 0 1 N N N 15.362 22.978 29.699 1.218 -0.702 2.589 H8 Y7G 38 Y7G H9 H9 H 0 1 N N N 15.740 21.262 29.329 2.047 0.290 3.812 H9 Y7G 39 Y7G H10 H10 H 0 1 N N N 16.666 22.578 28.530 0.284 0.423 3.604 H10 Y7G 40 Y7G H11 H11 H 0 1 N N N 8.544 20.482 28.395 -3.038 -0.820 -1.851 H11 Y7G 41 Y7G H12 H12 H 0 1 N N N 7.076 19.181 26.798 -4.642 0.024 0.604 H12 Y7G 42 Y7G H13 H13 H 0 1 N N N 8.446 19.107 25.638 -5.341 -0.642 -0.891 H13 Y7G 43 Y7G H14 H14 H 0 1 N N N 8.470 21.573 25.519 -3.275 -2.073 0.856 H14 Y7G 44 Y7G H15 H15 H 0 1 N N N 6.015 23.707 25.910 -5.294 -4.831 -1.127 H15 Y7G 45 Y7G H16 H16 H 0 1 N N N 4.802 22.665 26.729 -3.981 -4.962 0.080 H16 Y7G 46 Y7G H17 H17 H 0 1 N N N 6.420 21.348 27.689 -4.630 -2.668 -1.794 H17 Y7G 47 Y7G H18 H18 H 0 1 N N N 7.545 22.691 27.293 -3.034 -3.222 -1.188 H18 Y7G 48 Y7G H19 H19 H 0 1 N N N 9.892 18.607 29.136 -2.736 1.578 -2.244 H19 Y7G 49 Y7G S1 S1 S 0 1 N Y N 9.640 17.770 27.539 -3.774 2.439 -0.250 S1 Y7G 50 Y7G H21 H21 H 0 1 N N N 8.799 25.486 25.614 4.898 -1.979 0.275 H21 Y7G 51 Y7G H22 H22 H 0 1 N N N 9.902 25.465 24.196 5.284 -0.316 0.777 H22 Y7G 52 Y7G H23 H23 H 0 1 N N N 10.569 27.480 26.390 5.956 -1.447 -1.982 H23 Y7G 53 Y7G H24 H24 H 0 1 N N N 8.276 28.334 26.311 7.527 -2.673 -0.446 H24 Y7G 54 Y7G H25 H25 H 0 1 N N N 7.110 28.535 24.081 6.634 -0.962 1.497 H25 Y7G 55 Y7G H26 H26 H 0 1 N N N 7.711 26.843 24.142 8.358 -1.435 1.585 H26 Y7G 56 Y7G H27 H27 H 0 1 N N N 8.423 28.836 22.271 7.248 1.217 1.082 H27 Y7G 57 Y7G H28 H28 H 0 1 N N N 9.224 27.248 22.519 8.975 0.753 1.169 H28 Y7G 58 Y7G H29 H29 H 0 1 N N N 10.657 29.568 22.963 8.696 1.460 -1.232 H29 Y7G 59 Y7G H30 H30 H 0 1 N N N 10.302 29.909 25.591 9.611 -1.037 -0.776 H30 Y7G 60 Y7G H31 H31 H 0 1 N N N 8.822 30.356 24.676 8.603 -1.024 -2.273 H31 Y7G 61 Y7G H32 H32 H 0 1 N N N 11.209 26.992 23.604 6.601 0.741 -2.427 H32 Y7G 62 Y7G H33 H33 H 0 1 N N N 11.909 28.232 24.699 6.000 1.210 -0.807 H33 Y7G 63 Y7G H34 H34 H 0 1 N N N 12.500 24.276 27.441 1.562 0.280 -1.477 H34 Y7G 64 Y7G H35 H35 H 0 1 N N N 10.689 20.059 26.343 -2.217 0.025 0.811 H35 Y7G 65 Y7G H36 H36 H 0 1 N N N 4.795 22.020 24.265 -6.372 -4.356 1.074 H36 Y7G 66 Y7G H37 H37 H 0 1 N N N 8.109 17.100 29.144 -5.539 0.916 -1.878 H37 Y7G 67 Y7G O1 O6 O 0 1 N Y N ? ? ? -4.894 2.083 0.550 O1 Y7G 68 Y7G O2 O7 O 0 1 N Y N ? ? ? -2.520 2.749 0.342 O2 Y7G 69 Y7G O3 O8 O 0 1 N Y N ? ? ? -4.197 3.731 -0.934 O3 Y7G 70 Y7G H20 H20 H 0 1 N Y N ? ? ? -4.350 4.466 -0.325 H20 Y7G 71 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y7G C27 C28 SING N N 1 Y7G C27 C26 SING N N 2 Y7G C28 C30 SING N N 3 Y7G C28 C29 SING N N 4 Y7G O18 C14 DOUB N N 5 Y7G C26 C25 SING N N 6 Y7G C30 C24 SING N N 7 Y7G C14 N15 SING N N 8 Y7G C14 C13 SING N N 9 Y7G C29 C25 SING N N 10 Y7G N15 C16 SING N N 11 Y7G C23 C24 SING N N 12 Y7G C23 O22 SING N N 13 Y7G C25 C24 SING N N 14 Y7G O01 C02 DOUB N N 15 Y7G C13 C12 SING N N 16 Y7G C13 C17 SING N N 17 Y7G O22 C02 SING N N 18 Y7G C02 N03 SING N N 19 Y7G C16 C17 SING N N 20 Y7G C12 C11 SING N N 21 Y7G C07 C06 SING N N 22 Y7G N03 C04 SING N N 23 Y7G N10 C11 SING N N 24 Y7G N10 C09 SING N N 25 Y7G C04 C09 SING N N 26 Y7G C04 C05 SING N N 27 Y7G C11 C19 SING N N 28 Y7G C06 C05 SING N N 29 Y7G C06 C08 SING N N 30 Y7G C09 O21 DOUB N N 31 Y7G C19 O20 SING N N 32 Y7G C04 H1 SING N N 33 Y7G C05 H2 SING N N 34 Y7G C05 H3 SING N N 35 Y7G C06 H4 SING N N 36 Y7G C07 H5 SING N N 37 Y7G C07 H6 SING N N 38 Y7G C07 H7 SING N N 39 Y7G C08 H8 SING N N 40 Y7G C08 H9 SING N N 41 Y7G C08 H10 SING N N 42 Y7G C11 H11 SING N N 43 Y7G C12 H12 SING N N 44 Y7G C12 H13 SING N N 45 Y7G C13 H14 SING N N 46 Y7G C16 H15 SING N N 47 Y7G C16 H16 SING N N 48 Y7G C17 H17 SING N N 49 Y7G C17 H18 SING N N 50 Y7G C19 H19 SING N N 51 Y7G C19 S1 SING N N 52 Y7G C23 H21 SING N N 53 Y7G C23 H22 SING N N 54 Y7G C24 H23 SING N N 55 Y7G C25 H24 SING N N 56 Y7G C26 H25 SING N N 57 Y7G C26 H26 SING N N 58 Y7G C27 H27 SING N N 59 Y7G C27 H28 SING N N 60 Y7G C28 H29 SING N N 61 Y7G C29 H30 SING N N 62 Y7G C29 H31 SING N N 63 Y7G C30 H32 SING N N 64 Y7G C30 H33 SING N N 65 Y7G N03 H34 SING N N 66 Y7G N10 H35 SING N N 67 Y7G N15 H36 SING N N 68 Y7G O20 H37 SING N N 69 Y7G S1 O1 DOUB N N 70 Y7G S1 O2 DOUB N N 71 Y7G S1 O3 SING N N 72 Y7G O3 H20 SING N N 73 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y7G InChI InChI 1.03 "InChI=1S/C22H37N3O8S/c1-12(2)7-17(25-22(29)33-11-16-9-13-3-4-14(16)8-13)20(27)24-18(21(28)34(30,31)32)10-15-5-6-23-19(15)26/h12-18,21,28H,3-11H2,1-2H3,(H,23,26)(H,24,27)(H,25,29)(H,30,31,32)/t13-,14+,15-,16+,17-,18-,21-/m0/s1" Y7G InChIKey InChI 1.03 CDEICDIJDMTLMS-JBKSVKCVSA-N Y7G SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)OC[C@H]1C[C@H]2CC[C@@H]1C2)C(=O)N[C@@H](C[C@@H]3CCNC3=O)[C@@H](O)[S](O)(=O)=O" Y7G SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)OC[CH]1C[CH]2CC[CH]1C2)C(=O)N[CH](C[CH]3CCNC3=O)[CH](O)[S](O)(=O)=O" Y7G SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OC[C@H]2C[C@H]3CC[C@@H]2C3" Y7G SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OCC2CC3CCC2C3" # _pdbx_chem_comp_identifier.comp_id Y7G _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-[[(2~{S})-2-[[(1~{R},2~{S},4~{S})-2-bicyclo[2.2.1]heptanyl]methoxycarbonylamino]-4-methyl-pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y7G "Create component" 2021-02-09 RCSB Y7G "Modify name" 2021-02-09 RCSB Y7G "Initial release" 2021-02-17 RCSB ##