data_Y8Q # _chem_comp.id Y8Q _chem_comp.name "(3R)-3-{2-[2-methoxy-6-({methyl[(4-methyl-1,3-thiazol-2-yl)methyl]amino}methyl)phenoxy]acetamido}-N-methyl-3-[3-(trifluoromethyl)phenyl]propanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H31 F3 N4 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-12 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 564.620 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y8Q _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G5Q _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y8Q C13 C1 C 0 1 N N N N N N -13.023 12.069 50.017 -3.823 1.240 2.343 C13 Y8Q 1 Y8Q C16 C2 C 0 1 N N N N N N -14.462 12.782 51.880 -5.459 1.327 4.146 C16 Y8Q 2 Y8Q C18 C3 C 0 1 N N N N N N -14.601 8.530 46.824 0.019 1.256 0.058 C18 Y8Q 3 Y8Q C19 C4 C 0 1 N N N N N N -14.072 7.505 45.879 1.189 1.915 -0.627 C19 Y8Q 4 Y8Q C22 C5 C 0 1 Y N N N N N -12.021 7.674 44.533 3.550 2.106 -0.416 C22 Y8Q 5 Y8Q C23 C6 C 0 1 Y N N N N N -11.460 8.836 44.076 3.937 3.342 0.093 C23 Y8Q 6 Y8Q C24 C7 C 0 1 Y N N N N N -10.849 8.926 42.799 5.110 3.932 -0.347 C24 Y8Q 7 Y8Q C25 C8 C 0 1 Y N N N N N -10.894 7.739 41.992 5.894 3.294 -1.290 C25 Y8Q 8 Y8Q C26 C9 C 0 1 Y N N N N N -11.437 6.519 42.442 5.509 2.066 -1.797 C26 Y8Q 9 Y8Q C27 C10 C 0 1 Y N N N N N -12.047 6.477 43.762 4.340 1.471 -1.361 C27 Y8Q 10 Y8Q C1 C11 C 0 1 Y N N N N N -16.768 13.165 47.477 -4.881 1.606 -2.396 C1 Y8Q 11 Y8Q C2 C12 C 0 1 Y N N N N N -16.053 12.069 48.096 -3.808 1.749 -1.535 C2 Y8Q 12 Y8Q C3 C13 C 0 1 Y N N N N N -14.810 11.655 47.566 -3.547 0.777 -0.589 C3 Y8Q 13 Y8Q C4 C14 C 0 1 Y N N N N N -14.238 12.300 46.456 -4.357 -0.340 -0.503 C4 Y8Q 14 Y8Q C5 C15 C 0 1 Y N N N N N -14.975 13.343 45.864 -5.429 -0.484 -1.364 C5 Y8Q 15 Y8Q C6 C16 C 0 1 Y N N N N N -16.210 13.780 46.343 -5.691 0.489 -2.310 C6 Y8Q 16 Y8Q C7 C17 C 0 1 N N S N N N -14.067 10.514 48.284 -2.378 0.934 0.350 C7 Y8Q 17 Y8Q C8 C18 C 0 1 N N N N N N -14.407 14.034 44.671 -6.312 -1.702 -1.271 C8 Y8Q 18 Y8Q F9 F1 F 0 1 N N N N N N -13.414 13.369 44.057 -6.833 -1.997 -2.535 F9 Y8Q 19 Y8Q F10 F2 F 0 1 N N N N N N -15.337 14.275 43.754 -5.561 -2.788 -0.810 F10 Y8Q 20 Y8Q F11 F3 F 0 1 N N N N N N -13.857 15.235 44.965 -7.362 -1.449 -0.381 F11 Y8Q 21 Y8Q C12 C19 C 0 1 N N N N N N -12.728 10.995 48.965 -2.762 1.883 1.487 C12 Y8Q 22 Y8Q N14 N1 N 0 1 N N N N N N -14.051 11.808 50.867 -4.424 1.951 3.318 N14 Y8Q 23 Y8Q O15 O1 O 0 1 N N N N N N -12.445 13.112 50.042 -4.139 0.086 2.150 O15 Y8Q 24 Y8Q N17 N2 N 0 1 N N N N N N -13.652 9.493 47.296 -1.235 1.484 -0.381 N17 Y8Q 25 Y8Q O20 O2 O 0 1 N N N N N N -15.778 8.544 47.263 0.206 0.519 1.003 O20 Y8Q 26 Y8Q O21 O3 O 0 1 N N N N N N -12.599 7.690 45.806 2.402 1.520 0.017 O21 Y8Q 27 Y8Q O28 O4 O 0 1 N N N N N N -11.540 9.914 44.968 3.165 3.969 1.021 O28 Y8Q 28 Y8Q C29 C20 C 0 1 N N N N N N -10.775 11.099 44.571 3.624 5.234 1.499 C29 Y8Q 29 Y8Q C30 C21 C 0 1 N N N N N N -12.736 5.205 44.309 3.924 0.133 -1.915 C30 Y8Q 30 Y8Q N31 N3 N 0 1 N N N N N N -12.264 3.960 43.636 4.256 -0.922 -0.947 N31 Y8Q 31 Y8Q C32 C22 C 0 1 N N N N N N -10.806 3.673 44.031 3.591 -2.184 -1.296 C32 Y8Q 32 Y8Q C33 C23 C 0 1 N N N N N N -13.219 2.880 44.054 5.710 -1.104 -0.846 C33 Y8Q 33 Y8Q C34 C24 C 0 1 Y N N N N N -10.344 2.608 43.118 3.751 -3.165 -0.163 C34 Y8Q 34 Y8Q N35 N4 N 0 1 Y N N N N N -9.642 1.505 43.444 2.932 -3.292 0.826 N35 Y8Q 35 Y8Q C36 C25 C 0 1 Y N N N N N -9.385 0.753 42.249 3.222 -4.203 1.733 C36 Y8Q 36 Y8Q C37 C26 C 0 1 Y N N N N N -9.904 1.263 41.061 4.348 -4.881 1.497 C37 Y8Q 37 Y8Q S38 S1 S 0 1 Y N N N N N -10.705 2.740 41.384 5.041 -4.276 -0.006 S38 Y8Q 38 Y8Q C39 C27 C 0 1 N N N N N N -8.631 -0.513 42.417 2.354 -4.457 2.939 C39 Y8Q 39 Y8Q H50 H1 H 0 1 N N N N N N -15.306 12.377 52.458 -5.826 2.050 4.874 H50 Y8Q 40 Y8Q H48 H2 H 0 1 N N N N N N -13.619 12.986 52.556 -6.284 1.001 3.511 H48 Y8Q 41 Y8Q H49 H3 H 0 1 N N N N N N -14.771 13.716 51.387 -5.039 0.467 4.667 H49 Y8Q 42 Y8Q H52 H4 H 0 1 N N N N N N -14.307 6.496 46.248 1.216 1.611 -1.673 H52 Y8Q 43 Y8Q H53 H5 H 0 1 N N N N N N -14.519 7.644 44.884 1.082 2.998 -0.566 H53 Y8Q 44 Y8Q H54 H6 H 0 1 N N N N N N -10.377 9.834 42.454 5.413 4.892 0.046 H54 Y8Q 45 Y8Q H55 H7 H 0 1 N N N N N N -10.492 7.784 40.991 6.808 3.755 -1.633 H55 Y8Q 46 Y8Q H56 H8 H 0 1 N N N N N N -11.401 5.636 41.821 6.124 1.571 -2.534 H56 Y8Q 47 Y8Q H40 H9 H 0 1 N N N N N N -17.712 13.503 47.879 -5.088 2.368 -3.132 H40 Y8Q 48 Y8Q H41 H10 H 0 1 N N N N N N -16.468 11.570 48.959 -3.175 2.622 -1.602 H41 Y8Q 49 Y8Q H42 H11 H 0 1 N N N N N N -13.272 12.007 46.073 -4.153 -1.100 0.236 H42 Y8Q 50 Y8Q H43 H12 H 0 1 N N N N N N -16.733 14.584 45.847 -6.529 0.377 -2.983 H43 Y8Q 51 Y8Q H44 H13 H 0 1 N N N N N N -14.721 10.068 49.048 -2.112 -0.039 0.764 H44 Y8Q 52 Y8Q H45 H14 H 0 1 N N N N N N -12.239 10.137 49.449 -3.146 2.814 1.069 H45 Y8Q 53 Y8Q H46 H15 H 0 1 N N N N N N -12.060 11.413 48.197 -1.883 2.094 2.096 H46 Y8Q 54 Y8Q H47 H16 H 0 1 N N N N N N -14.535 10.936 50.799 -4.170 2.874 3.472 H47 Y8Q 55 Y8Q H51 H17 H 0 1 N N N N N N -12.711 9.476 46.959 -1.380 2.013 -1.181 H51 Y8Q 56 Y8Q H59 H18 H 0 1 N N N N N N -10.899 11.887 45.329 3.703 5.931 0.664 H59 Y8Q 57 Y8Q H57 H19 H 0 1 N N N N N N -9.710 10.836 44.486 2.918 5.624 2.232 H57 Y8Q 58 Y8Q H58 H20 H 0 1 N N N N N N -11.141 11.463 43.600 4.602 5.114 1.965 H58 Y8Q 59 Y8Q H60 H21 H 0 1 N N N N N N -12.524 5.125 45.385 2.849 0.133 -2.097 H60 Y8Q 60 Y8Q H61 H22 H 0 1 N N N N N N -13.821 5.299 44.155 4.451 -0.053 -2.850 H61 Y8Q 61 Y8Q H63 H24 H 0 1 N N N N N N -10.191 4.577 43.908 2.530 -2.000 -1.469 H63 Y8Q 62 Y8Q H62 H25 H 0 1 N N N N N N -10.752 3.332 45.075 4.041 -2.595 -2.199 H62 Y8Q 63 Y8Q H66 H26 H 0 1 N N N N N N -12.924 1.928 43.588 6.166 -0.186 -0.474 H66 Y8Q 64 Y8Q H64 H27 H 0 1 N N N N N N -13.197 2.774 45.149 5.927 -1.921 -0.159 H64 Y8Q 65 Y8Q H65 H28 H 0 1 N N N N N N -14.237 3.146 43.732 6.117 -1.338 -1.830 H65 Y8Q 66 Y8Q H67 H29 H 0 1 N N N N N N -9.815 0.799 40.090 4.760 -5.665 2.116 H67 Y8Q 67 Y8Q H70 H30 H 0 1 N N N N N N -8.390 -0.659 43.480 1.612 -5.218 2.698 H70 Y8Q 68 Y8Q H68 H31 H 0 1 N N N N N N -9.244 -1.354 42.061 2.974 -4.803 3.766 H68 Y8Q 69 Y8Q H69 H32 H 0 1 N N N N N N -7.700 -0.465 41.834 1.849 -3.534 3.224 H69 Y8Q 70 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y8Q C1 C6 DOUB Y N 1 Y8Q C1 C2 SING Y N 2 Y8Q C2 C3 DOUB Y N 3 Y8Q C3 C7 SING N N 4 Y8Q C3 C4 SING Y N 5 Y8Q C4 C5 DOUB Y N 6 Y8Q C5 C6 SING Y N 7 Y8Q C5 C8 SING N N 8 Y8Q C7 C12 SING N N 9 Y8Q C7 N17 SING N N 10 Y8Q C8 F11 SING N N 11 Y8Q C8 F9 SING N N 12 Y8Q C8 F10 SING N N 13 Y8Q C12 C13 SING N N 14 Y8Q C13 N14 SING N N 15 Y8Q C13 O15 DOUB N N 16 Y8Q N14 C16 SING N N 17 Y8Q N17 C18 SING N N 18 Y8Q C18 C19 SING N N 19 Y8Q C18 O20 DOUB N N 20 Y8Q C19 O21 SING N N 21 Y8Q O21 C22 SING N N 22 Y8Q C22 C23 DOUB Y N 23 Y8Q C22 C27 SING Y N 24 Y8Q C23 C24 SING Y N 25 Y8Q C23 O28 SING N N 26 Y8Q C24 C25 DOUB Y N 27 Y8Q C25 C26 SING Y N 28 Y8Q C26 C27 DOUB Y N 29 Y8Q C27 C30 SING N N 30 Y8Q O28 C29 SING N N 31 Y8Q C30 N31 SING N N 32 Y8Q N31 C32 SING N N 33 Y8Q N31 C33 SING N N 34 Y8Q C32 C34 SING N N 35 Y8Q C34 N35 DOUB Y N 36 Y8Q C34 S38 SING Y N 37 Y8Q N35 C36 SING Y N 38 Y8Q C36 C37 DOUB Y N 39 Y8Q C36 C39 SING N N 40 Y8Q C37 S38 SING Y N 41 Y8Q C16 H50 SING N N 42 Y8Q C16 H48 SING N N 43 Y8Q C16 H49 SING N N 44 Y8Q C19 H52 SING N N 45 Y8Q C19 H53 SING N N 46 Y8Q C24 H54 SING N N 47 Y8Q C25 H55 SING N N 48 Y8Q C26 H56 SING N N 49 Y8Q C1 H40 SING N N 50 Y8Q C2 H41 SING N N 51 Y8Q C4 H42 SING N N 52 Y8Q C6 H43 SING N N 53 Y8Q C7 H44 SING N N 54 Y8Q C12 H45 SING N N 55 Y8Q C12 H46 SING N N 56 Y8Q N14 H47 SING N N 57 Y8Q N17 H51 SING N N 58 Y8Q C29 H59 SING N N 59 Y8Q C29 H57 SING N N 60 Y8Q C29 H58 SING N N 61 Y8Q C30 H60 SING N N 62 Y8Q C30 H61 SING N N 63 Y8Q C32 H63 SING N N 64 Y8Q C32 H62 SING N N 65 Y8Q C33 H66 SING N N 66 Y8Q C33 H64 SING N N 67 Y8Q C33 H65 SING N N 68 Y8Q C37 H67 SING N N 69 Y8Q C39 H70 SING N N 70 Y8Q C39 H68 SING N N 71 Y8Q C39 H69 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y8Q SMILES ACDLabs 12.01 "Cc1csc(CN(C)Cc2cccc(OC)c2OCC(=O)NC(CC(=O)NC)c2cccc(c2)C(F)(F)F)n1" Y8Q InChI InChI 1.06 "InChI=1S/C27H31F3N4O4S/c1-17-16-39-25(32-17)14-34(3)13-19-8-6-10-22(37-4)26(19)38-15-24(36)33-21(12-23(35)31-2)18-7-5-9-20(11-18)27(28,29)30/h5-11,16,21H,12-15H2,1-4H3,(H,31,35)(H,33,36)" Y8Q InChIKey InChI 1.06 GRMFBCFCVUZSEE-UHFFFAOYSA-N Y8Q SMILES_CANONICAL CACTVS 3.385 "CNC(=O)C[C@H](NC(=O)COc1c(CN(C)Cc2scc(C)n2)cccc1OC)c3cccc(c3)C(F)(F)F" Y8Q SMILES CACTVS 3.385 "CNC(=O)C[CH](NC(=O)COc1c(CN(C)Cc2scc(C)n2)cccc1OC)c3cccc(c3)C(F)(F)F" Y8Q SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1csc(n1)CN(C)Cc2cccc(c2OCC(=O)N[C@@H](CC(=O)NC)c3cccc(c3)C(F)(F)F)OC" Y8Q SMILES "OpenEye OEToolkits" 2.0.7 "Cc1csc(n1)CN(C)Cc2cccc(c2OCC(=O)NC(CC(=O)NC)c3cccc(c3)C(F)(F)F)OC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Y8Q "SYSTEMATIC NAME" ACDLabs 12.01 "(3R)-3-{2-[2-methoxy-6-({methyl[(4-methyl-1,3-thiazol-2-yl)methyl]amino}methyl)phenoxy]acetamido}-N-methyl-3-[3-(trifluoromethyl)phenyl]propanamide" Y8Q "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{S})-3-[2-[2-methoxy-6-[[methyl-[(4-methyl-1,3-thiazol-2-yl)methyl]amino]methyl]phenoxy]ethanoylamino]-~{N}-methyl-3-[3-(trifluoromethyl)phenyl]propanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y8Q "Create component" 2023-06-12 RCSB Y8Q "Initial release" 2024-12-18 RCSB #