data_Y9Q # _chem_comp.id Y9Q _chem_comp.name "2-[4-[(5,6-diphenylpyrazin-2-yl)-propan-2-yl-amino]butoxy]ethanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H29 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-11-28 _chem_comp.pdbx_modified_date 2024-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 419.516 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y9Q _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8X79 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y9Q C1 C1 C 0 1 N N N N N N 96.900 118.116 89.147 0.633 -3.708 -1.380 C1 Y9Q 1 Y9Q C2 C2 C 0 1 N N N N N N 97.209 119.376 88.343 -0.499 -3.168 -0.505 C2 Y9Q 2 Y9Q C3 C3 C 0 1 N N N N N N 96.761 120.636 89.073 -0.116 -3.310 0.970 C3 Y9Q 3 Y9Q C4 C4 C 0 1 N N N N N N 98.975 119.533 86.613 -2.036 -1.316 -1.309 C4 Y9Q 4 Y9Q C5 C5 C 0 1 N N N N N N 99.355 118.131 86.165 -2.924 -0.933 -0.123 C5 Y9Q 5 Y9Q C6 C6 C 0 1 N N N N N N 100.179 118.228 84.894 -4.290 -0.473 -0.637 C6 Y9Q 6 Y9Q N1 N1 N 0 1 N N N N N N 98.613 119.457 88.001 -0.727 -1.755 -0.817 N1 Y9Q 7 Y9Q C7 C7 C 0 1 N N N N N N 99.401 119.057 83.882 -5.178 -0.090 0.549 C7 Y9Q 8 Y9Q O1 O1 O 0 1 N N N N N N 98.039 118.985 84.181 -6.454 0.338 0.069 O1 Y9Q 9 Y9Q C8 C8 C 0 1 N N N N N N 97.227 119.804 83.399 -7.364 0.721 1.102 C8 Y9Q 10 Y9Q C9 C9 C 0 1 N N N N N N 96.572 118.912 82.360 -8.670 1.153 0.486 C9 Y9Q 11 Y9Q O2 O2 O 0 1 N N N N N N 96.943 117.724 82.276 -9.681 1.558 1.271 O2 Y9Q 12 Y9Q O3 O3 O 0 1 N N N N N N 95.669 119.340 81.604 -8.807 1.135 -0.714 O3 Y9Q 13 Y9Q C10 C10 C 0 1 Y N N N N N 99.699 119.465 88.962 0.297 -0.832 -0.646 C10 Y9Q 14 Y9Q C11 C11 C 0 1 Y N N N N N 99.511 119.468 90.319 0.049 0.526 -0.844 C11 Y9Q 15 Y9Q N2 N2 N 0 1 Y N N N N N 100.564 119.481 91.109 1.016 1.408 -0.683 N2 Y9Q 16 Y9Q C12 C12 C 0 1 Y N N N N N 101.786 119.486 90.627 2.234 1.005 -0.333 C12 Y9Q 17 Y9Q C13 C13 C 0 1 Y N N N N N 101.968 119.474 89.262 2.487 -0.361 -0.133 C13 Y9Q 18 Y9Q N3 N3 N 0 1 Y N N N N N 100.917 119.467 88.485 1.506 -1.244 -0.292 N3 Y9Q 19 Y9Q C14 C14 C 0 1 Y N N N N N 103.325 119.486 88.577 3.842 -0.817 0.257 C14 Y9Q 20 Y9Q C15 C15 C 0 1 Y N N N N N 104.287 120.395 88.936 3.998 -1.756 1.276 C15 Y9Q 21 Y9Q C16 C16 C 0 1 Y N N N N N 105.503 120.396 88.304 5.262 -2.177 1.635 C16 Y9Q 22 Y9Q C17 C17 C 0 1 Y N N N N N 105.751 119.505 87.287 6.373 -1.670 0.987 C17 Y9Q 23 Y9Q C18 C18 C 0 1 Y N N N N N 104.783 118.603 86.921 6.225 -0.738 -0.025 C18 Y9Q 24 Y9Q C19 C19 C 0 1 Y N N N N N 103.564 118.602 87.561 4.966 -0.313 -0.396 C19 Y9Q 25 Y9Q C20 C20 C 0 1 Y N N N N N 102.942 119.493 91.612 3.321 1.996 -0.153 C20 Y9Q 26 Y9Q C21 C21 C 0 1 Y N N N N N 102.827 120.237 92.764 3.504 3.011 -1.091 C21 Y9Q 27 Y9Q C22 C22 C 0 1 Y N N N N N 103.856 120.251 93.677 4.518 3.931 -0.918 C22 Y9Q 28 Y9Q C23 C23 C 0 1 Y N N N N N 104.998 119.521 93.426 5.352 3.847 0.182 C23 Y9Q 29 Y9Q C24 C24 C 0 1 Y N N N N N 105.123 118.771 92.277 5.175 2.842 1.116 C24 Y9Q 30 Y9Q C25 C25 C 0 1 Y N N N N N 104.084 118.751 91.374 4.160 1.920 0.958 C25 Y9Q 31 Y9Q H1 H1 H 0 1 N N N N N N 95.827 118.088 89.388 0.803 -4.759 -1.148 H1 Y9Q 32 Y9Q H2 H2 H 0 1 N N N N N N 97.165 117.228 88.554 0.360 -3.607 -2.431 H2 Y9Q 33 Y9Q H3 H3 H 0 1 N N N N N N 97.485 118.123 90.078 1.544 -3.141 -1.186 H3 Y9Q 34 Y9Q H4 H4 H 0 1 N N N N N N 96.631 119.317 87.409 -1.410 -3.735 -0.699 H4 Y9Q 35 Y9Q H5 H5 H 0 1 N N N N N N 95.693 120.555 89.324 0.795 -2.743 1.164 H5 Y9Q 36 Y9Q H6 H6 H 0 1 N N N N N N 97.347 120.752 89.997 -0.923 -2.925 1.594 H6 Y9Q 37 Y9Q H7 H7 H 0 1 N N N N N N 96.920 121.511 88.426 0.054 -4.361 1.202 H7 Y9Q 38 Y9Q H8 H8 H 0 1 N N N N N N 99.830 120.214 86.484 -2.505 -2.125 -1.867 H8 Y9Q 39 Y9Q H9 H9 H 0 1 N N N N N N 98.123 119.899 86.022 -1.907 -0.451 -1.960 H9 Y9Q 40 Y9Q H10 H10 H 0 1 N N N N N N 98.444 117.546 85.971 -3.052 -1.797 0.529 H10 Y9Q 41 Y9Q H11 H11 H 0 1 N N N N N N 99.946 117.639 86.952 -2.454 -0.123 0.436 H11 Y9Q 42 Y9Q H12 H12 H 0 1 N N N N N N 100.359 117.221 84.490 -4.161 0.391 -1.288 H12 Y9Q 43 Y9Q H13 H13 H 0 1 N N N N N N 101.142 118.714 85.111 -4.759 -1.283 -1.195 H13 Y9Q 44 Y9Q H14 H14 H 0 1 N N N N N N 99.577 118.663 82.870 -5.306 -0.955 1.201 H14 Y9Q 45 Y9Q H15 H15 H 0 1 N N N N N N 99.734 120.104 83.931 -4.709 0.719 1.108 H15 Y9Q 46 Y9Q H16 H16 H 0 1 N N N N N N 97.833 120.578 82.905 -7.538 -0.126 1.765 H16 Y9Q 47 Y9Q H17 H17 H 0 1 N N N N N N 96.459 120.283 84.024 -6.941 1.548 1.672 H17 Y9Q 48 Y9Q H18 H18 H 0 1 N N N N N N 96.446 117.284 81.596 -10.499 1.825 0.830 H18 Y9Q 49 Y9Q H19 H19 H 0 1 N N N N N N 98.514 119.460 90.734 -0.938 0.857 -1.129 H19 Y9Q 50 Y9Q H20 H20 H 0 1 N N N N N N 104.086 121.112 89.719 3.131 -2.153 1.784 H20 Y9Q 51 Y9Q H21 H21 H 0 1 N N N N N N 106.267 121.097 88.605 5.384 -2.904 2.425 H21 Y9Q 52 Y9Q H22 H22 H 0 1 N N N N N N 106.703 119.515 86.778 7.361 -2.002 1.271 H22 Y9Q 53 Y9Q H23 H23 H 0 1 N N N N N N 104.978 117.894 86.130 7.096 -0.345 -0.528 H23 Y9Q 54 Y9Q H24 H24 H 0 1 N N N N N N 102.797 117.904 87.261 4.851 0.414 -1.187 H24 Y9Q 55 Y9Q H25 H25 H 0 1 N N N N N N 101.930 120.809 92.951 2.854 3.077 -1.951 H25 Y9Q 56 Y9Q H26 H26 H 0 1 N N N N N N 103.770 120.830 94.584 4.661 4.718 -1.644 H26 Y9Q 57 Y9Q H27 H27 H 0 1 N N N N N N 105.807 119.537 94.141 6.145 4.569 0.313 H27 Y9Q 58 Y9Q H28 H28 H 0 1 N N N N N N 106.024 118.206 92.087 5.830 2.781 1.973 H28 Y9Q 59 Y9Q H29 H29 H 0 1 N N N N N N 104.161 118.154 90.477 4.020 1.138 1.690 H29 Y9Q 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y9Q O3 C9 DOUB N N 1 Y9Q O2 C9 SING N N 2 Y9Q C9 C8 SING N N 3 Y9Q C8 O1 SING N N 4 Y9Q C7 O1 SING N N 5 Y9Q C7 C6 SING N N 6 Y9Q C6 C5 SING N N 7 Y9Q C5 C4 SING N N 8 Y9Q C4 N1 SING N N 9 Y9Q C18 C17 DOUB Y N 10 Y9Q C18 C19 SING Y N 11 Y9Q C17 C16 SING Y N 12 Y9Q C19 C14 DOUB Y N 13 Y9Q N1 C2 SING N N 14 Y9Q N1 C10 SING N N 15 Y9Q C16 C15 DOUB Y N 16 Y9Q C2 C3 SING N N 17 Y9Q C2 C1 SING N N 18 Y9Q N3 C10 SING Y N 19 Y9Q N3 C13 DOUB Y N 20 Y9Q C14 C15 SING Y N 21 Y9Q C14 C13 SING N N 22 Y9Q C10 C11 DOUB Y N 23 Y9Q C13 C12 SING Y N 24 Y9Q C11 N2 SING Y N 25 Y9Q C12 N2 DOUB Y N 26 Y9Q C12 C20 SING N N 27 Y9Q C25 C20 DOUB Y N 28 Y9Q C25 C24 SING Y N 29 Y9Q C20 C21 SING Y N 30 Y9Q C24 C23 DOUB Y N 31 Y9Q C21 C22 DOUB Y N 32 Y9Q C23 C22 SING Y N 33 Y9Q C1 H1 SING N N 34 Y9Q C1 H2 SING N N 35 Y9Q C1 H3 SING N N 36 Y9Q C2 H4 SING N N 37 Y9Q C3 H5 SING N N 38 Y9Q C3 H6 SING N N 39 Y9Q C3 H7 SING N N 40 Y9Q C4 H8 SING N N 41 Y9Q C4 H9 SING N N 42 Y9Q C5 H10 SING N N 43 Y9Q C5 H11 SING N N 44 Y9Q C6 H12 SING N N 45 Y9Q C6 H13 SING N N 46 Y9Q C7 H14 SING N N 47 Y9Q C7 H15 SING N N 48 Y9Q C8 H16 SING N N 49 Y9Q C8 H17 SING N N 50 Y9Q O2 H18 SING N N 51 Y9Q C11 H19 SING N N 52 Y9Q C15 H20 SING N N 53 Y9Q C16 H21 SING N N 54 Y9Q C17 H22 SING N N 55 Y9Q C18 H23 SING N N 56 Y9Q C19 H24 SING N N 57 Y9Q C21 H25 SING N N 58 Y9Q C22 H26 SING N N 59 Y9Q C23 H27 SING N N 60 Y9Q C24 H28 SING N N 61 Y9Q C25 H29 SING N N 62 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y9Q InChI InChI 1.06 "InChI=1S/C25H29N3O3/c1-19(2)28(15-9-10-16-31-18-23(29)30)22-17-26-24(20-11-5-3-6-12-20)25(27-22)21-13-7-4-8-14-21/h3-8,11-14,17,19H,9-10,15-16,18H2,1-2H3,(H,29,30)" Y9Q InChIKey InChI 1.06 OJQMKCBWYCWFPU-UHFFFAOYSA-N Y9Q SMILES_CANONICAL CACTVS 3.385 "CC(C)N(CCCCOCC(O)=O)c1cnc(c2ccccc2)c(n1)c3ccccc3" Y9Q SMILES CACTVS 3.385 "CC(C)N(CCCCOCC(O)=O)c1cnc(c2ccccc2)c(n1)c3ccccc3" Y9Q SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)N(CCCCOCC(=O)O)c1cnc(c(n1)c2ccccc2)c3ccccc3" Y9Q SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)N(CCCCOCC(=O)O)c1cnc(c(n1)c2ccccc2)c3ccccc3" # _pdbx_chem_comp_identifier.comp_id Y9Q _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[4-[(5,6-diphenylpyrazin-2-yl)-propan-2-yl-amino]butoxy]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y9Q "Create component" 2023-11-28 PDBJ Y9Q "Initial release" 2024-03-06 RCSB #