data_Y9S # _chem_comp.id Y9S _chem_comp.name "[4-(trifluoromethoxy)phenyl]methyl (3aR,6aS)-5-(6-sulfamoylpyridine-3-carbonyl)hexahydropyrrolo[3,4-c]pyrrole-2(1H)-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H21 F3 N4 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-12 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 514.475 _chem_comp.one_letter_code ? _chem_comp.three_letter_code Y9S _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G4N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal Y9S C10 C1 C 0 1 Y N N N N N -12.978 5.790 43.615 -5.567 0.411 -0.878 C10 Y9S 1 Y9S C11 C2 C 0 1 Y N N N N N -11.977 5.181 42.798 -6.270 -0.758 -0.660 C11 Y9S 2 Y9S C17 C3 C 0 1 N N N N N N -15.119 9.784 48.308 0.094 4.222 -0.104 C17 Y9S 3 Y9S C18 C4 C 0 1 N N N N N N -12.892 8.926 47.543 -0.249 1.888 0.419 C18 Y9S 4 Y9S C19 C5 C 0 1 N N S N N N -12.786 10.364 48.068 1.123 2.090 -0.187 C19 Y9S 5 Y9S C20 C6 C 0 1 N N S N N N -13.966 10.450 49.094 1.368 3.567 0.324 C20 Y9S 6 Y9S C21 C7 C 0 1 N N N N N N -13.845 11.903 49.448 2.761 3.801 -0.163 C21 Y9S 7 Y9S C23 C8 C 0 1 N N N N N N -11.636 10.865 48.928 2.392 1.472 0.360 C23 Y9S 8 Y9S C26 C9 C 0 1 N N N N N N -11.749 12.818 50.654 4.742 2.222 -0.233 C26 Y9S 9 Y9S C27 C10 C 0 1 Y N N N N N -10.302 12.712 50.942 5.251 0.837 -0.142 C27 Y9S 10 Y9S F1 F1 F 0 1 N N N N N N -9.916 1.795 40.751 -6.419 -3.455 -0.854 F1 Y9S 11 Y9S C2 C11 C 0 1 N N N N N N -10.955 2.394 41.285 -7.641 -3.060 -0.299 C2 Y9S 12 Y9S O3 O1 O 0 1 N N N N N N -10.588 3.148 42.410 -7.401 -2.224 0.834 O3 Y9S 13 Y9S F4 F2 F 0 1 N N N N N N -11.579 3.111 40.328 -8.379 -2.352 -1.254 F4 Y9S 14 Y9S F5 F3 F 0 1 N N N N N N -11.836 1.418 41.682 -8.359 -4.192 0.100 F5 Y9S 15 Y9S C6 C12 C 0 1 Y N N N N N -11.570 3.874 43.096 -6.709 -1.074 0.617 C6 Y9S 16 Y9S C7 C13 C 0 1 Y N N N N N -12.137 3.129 44.177 -6.440 -0.215 1.673 C7 Y9S 17 Y9S C8 C14 C 0 1 Y N N N N N -13.132 3.763 44.970 -5.737 0.953 1.450 C8 Y9S 18 Y9S C9 C15 C 0 1 Y N N N N N -13.555 5.071 44.683 -5.296 1.263 0.177 C9 Y9S 19 Y9S C12 C16 C 0 1 N N N N N N -14.696 5.675 45.562 -4.529 2.537 -0.063 C12 Y9S 20 Y9S O13 O2 O 0 1 N N N N N N -14.143 6.826 46.235 -3.108 2.286 0.105 O13 Y9S 21 Y9S C14 C17 C 0 1 N N N N N N -15.007 7.661 46.965 -2.277 3.330 -0.077 C14 Y9S 22 Y9S O15 O3 O 0 1 N N N N N N -16.201 7.392 47.168 -2.727 4.421 -0.367 O15 Y9S 23 Y9S N16 N1 N 0 1 N N N N N N -14.360 8.744 47.536 -0.947 3.164 0.064 N16 Y9S 24 Y9S N22 N2 N 0 1 N N N N N N -12.348 11.913 49.739 3.433 2.473 -0.032 N22 Y9S 25 Y9S O28 O4 O 0 1 N N N N N N -12.395 13.692 51.293 5.504 3.134 -0.488 O28 Y9S 26 Y9S C29 C18 C 0 1 Y N N N N N -9.988 12.070 52.210 6.412 0.462 -0.820 C29 Y9S 27 Y9S N30 N3 N 0 1 Y N N N N N -8.714 11.877 52.661 6.865 -0.772 -0.740 N30 Y9S 28 Y9S C31 C19 C 0 1 Y N N N N N -7.686 12.390 51.823 6.251 -1.695 -0.024 C31 Y9S 29 Y9S C32 C20 C 0 1 Y N N N N N -7.936 12.997 50.634 5.095 -1.403 0.677 C32 Y9S 30 Y9S C33 C21 C 0 1 Y N N N N N -9.267 13.154 50.158 4.580 -0.119 0.630 C33 Y9S 31 Y9S S34 S1 S 0 1 N N N N N N -6.008 12.241 52.431 6.913 -3.326 0.038 S34 Y9S 32 Y9S N35 N4 N 0 1 N N N N N N -6.180 10.757 53.196 7.965 -3.380 1.316 N35 Y9S 33 Y9S O36 O5 O 0 1 N N N N N N -5.205 12.236 51.190 5.832 -4.186 0.371 O36 Y9S 34 Y9S O37 O6 O 0 1 N N N N N N -5.666 13.239 53.385 7.699 -3.485 -1.135 O37 Y9S 35 Y9S H40 H1 H 0 1 N N N N N N -13.294 6.803 43.415 -5.225 0.658 -1.872 H40 Y9S 36 Y9S H41 H2 H 0 1 N N N N N N -11.543 5.717 41.967 -6.478 -1.424 -1.484 H41 Y9S 37 Y9S H45 H3 H 0 1 N N N N N N -15.621 10.499 47.640 -0.126 5.078 0.534 H45 Y9S 38 Y9S H44 H4 H 0 1 N N N N N N -15.860 9.329 48.982 0.159 4.532 -1.147 H44 Y9S 39 Y9S H46 H5 H 0 1 N N N N N N -12.398 8.211 48.217 -0.751 1.033 -0.035 H46 Y9S 40 Y9S H47 H6 H 0 1 N N N N N N -12.467 8.831 46.533 -0.182 1.767 1.500 H47 Y9S 41 Y9S H25 H7 H 0 1 N N N N N N -12.970 11.071 47.246 1.087 2.038 -1.275 H25 Y9S 42 Y9S H24 H8 H 0 1 N N N N N N -13.722 9.832 49.971 1.394 3.538 1.413 H24 Y9S 43 Y9S H49 H9 H 0 1 N N N N N N -14.113 12.562 48.609 2.751 4.121 -1.205 H49 Y9S 44 Y9S H48 H10 H 0 1 N N N N N N -14.445 12.170 50.330 3.262 4.543 0.459 H48 Y9S 45 Y9S H50 H11 H 0 1 N N N N N N -11.225 10.067 49.564 2.339 1.373 1.444 H50 Y9S 46 Y9S H51 H12 H 0 1 N N N N N N -10.830 11.299 48.318 2.584 0.505 -0.106 H51 Y9S 47 Y9S H38 H13 H 0 1 N N N N N N -11.820 2.118 44.384 -6.781 -0.459 2.668 H38 Y9S 48 Y9S H39 H14 H 0 1 N N N N N N -13.568 3.232 45.803 -5.528 1.622 2.272 H39 Y9S 49 Y9S H43 H15 H 0 1 N N N N N N -15.542 5.978 44.928 -4.718 2.890 -1.077 H43 Y9S 50 Y9S H42 H16 H 0 1 N N N N N N -15.038 4.934 46.299 -4.850 3.296 0.651 H42 Y9S 51 Y9S H52 H17 H 0 1 N N N N N N -10.806 11.728 52.827 6.942 1.190 -1.416 H52 Y9S 52 Y9S H53 H18 H 0 1 N N N N N N -7.112 13.366 50.041 4.602 -2.167 1.259 H53 Y9S 53 Y9S H54 H19 H 0 1 N N N N N N -9.459 13.612 49.199 3.682 0.138 1.171 H54 Y9S 54 Y9S H55 H20 H 0 1 N N N N N N -5.310 10.494 53.614 8.102 -4.211 1.796 H55 Y9S 55 Y9S H56 H21 H 0 1 N N N N N N -6.882 10.827 53.904 8.443 -2.580 1.584 H56 Y9S 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal Y9S F1 C2 SING N N 1 Y9S C2 O3 SING N N 2 Y9S C2 F4 SING N N 3 Y9S C2 F5 SING N N 4 Y9S O3 C6 SING N N 5 Y9S C6 C7 DOUB Y N 6 Y9S C6 C11 SING Y N 7 Y9S C7 C8 SING Y N 8 Y9S C8 C9 DOUB Y N 9 Y9S C9 C10 SING Y N 10 Y9S C9 C12 SING N N 11 Y9S C10 C11 DOUB Y N 12 Y9S C12 O13 SING N N 13 Y9S O13 C14 SING N N 14 Y9S C14 O15 DOUB N N 15 Y9S C14 N16 SING N N 16 Y9S N16 C17 SING N N 17 Y9S N16 C18 SING N N 18 Y9S C17 C20 SING N N 19 Y9S C18 C19 SING N N 20 Y9S C19 C20 SING N N 21 Y9S C19 C23 SING N N 22 Y9S C20 C21 SING N N 23 Y9S C21 N22 SING N N 24 Y9S N22 C23 SING N N 25 Y9S N22 C26 SING N N 26 Y9S C26 C27 SING N N 27 Y9S C26 O28 DOUB N N 28 Y9S C27 C29 DOUB Y N 29 Y9S C27 C33 SING Y N 30 Y9S C29 N30 SING Y N 31 Y9S N30 C31 DOUB Y N 32 Y9S C31 C32 SING Y N 33 Y9S C31 S34 SING N N 34 Y9S C32 C33 DOUB Y N 35 Y9S S34 N35 SING N N 36 Y9S S34 O36 DOUB N N 37 Y9S S34 O37 DOUB N N 38 Y9S C10 H40 SING N N 39 Y9S C11 H41 SING N N 40 Y9S C17 H45 SING N N 41 Y9S C17 H44 SING N N 42 Y9S C18 H46 SING N N 43 Y9S C18 H47 SING N N 44 Y9S C19 H25 SING N N 45 Y9S C20 H24 SING N N 46 Y9S C21 H49 SING N N 47 Y9S C21 H48 SING N N 48 Y9S C23 H50 SING N N 49 Y9S C23 H51 SING N N 50 Y9S C7 H38 SING N N 51 Y9S C8 H39 SING N N 52 Y9S C12 H43 SING N N 53 Y9S C12 H42 SING N N 54 Y9S C29 H52 SING N N 55 Y9S C32 H53 SING N N 56 Y9S C33 H54 SING N N 57 Y9S N35 H55 SING N N 58 Y9S N35 H56 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor Y9S SMILES ACDLabs 12.01 "NS(=O)(=O)c1ccc(cn1)C(=O)N1CC2CN(CC2C1)C(=O)OCc1ccc(OC(F)(F)F)cc1" Y9S InChI InChI 1.06 "InChI=1S/C21H21F3N4O6S/c22-21(23,24)34-17-4-1-13(2-5-17)12-33-20(30)28-10-15-8-27(9-16(15)11-28)19(29)14-3-6-18(26-7-14)35(25,31)32/h1-7,15-16H,8-12H2,(H2,25,31,32)" Y9S InChIKey InChI 1.06 NKXQRZNJQNMELC-UHFFFAOYSA-N Y9S SMILES_CANONICAL CACTVS 3.385 "N[S](=O)(=O)c1ccc(cn1)C(=O)N2C[C@H]3CN(C[C@@H]3C2)C(=O)OCc4ccc(OC(F)(F)F)cc4" Y9S SMILES CACTVS 3.385 "N[S](=O)(=O)c1ccc(cn1)C(=O)N2C[CH]3CN(C[CH]3C2)C(=O)OCc4ccc(OC(F)(F)F)cc4" Y9S SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1COC(=O)N2C[C@@H]3CN(C[C@H]3C2)C(=O)c4ccc(nc4)S(=O)(=O)N)OC(F)(F)F" Y9S SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1COC(=O)N2CC3CN(CC3C2)C(=O)c4ccc(nc4)S(=O)(=O)N)OC(F)(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier Y9S "SYSTEMATIC NAME" ACDLabs 12.01 "[4-(trifluoromethoxy)phenyl]methyl (3aR,6aS)-5-(6-sulfamoylpyridine-3-carbonyl)hexahydropyrrolo[3,4-c]pyrrole-2(1H)-carboxylate" Y9S "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[4-(trifluoromethyloxy)phenyl]methyl (3~{a}~{S},6~{a}~{S})-2-(6-sulfamoylpyridin-3-yl)carbonyl-1,3,3~{a},4,6,6~{a}-hexahydropyrrolo[3,4-c]pyrrole-5-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site Y9S "Create component" 2023-06-12 RCSB Y9S "Initial release" 2024-12-18 RCSB #