data_YA7 # _chem_comp.id YA7 _chem_comp.name "N-(5-(6-(2-((2S,6R)-2,6-dimethylmorpholino)pyridin-4-yl)-1-oxoisoindolin-4-yl)-2-methoxypyridin-3-yl)methanesulfonamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H29 N5 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-02-15 _chem_comp.pdbx_modified_date 2022-02-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 523.604 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YA7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7LQ1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YA7 C1 C1 C 0 1 N N N 30.873 8.779 29.342 7.580 1.019 -2.023 C1 YA7 1 YA7 C3 C2 C 0 1 Y N N 32.880 9.453 30.491 5.610 0.392 -0.852 C3 YA7 2 YA7 C5 C3 C 0 1 Y N N 32.886 11.364 31.832 3.769 1.750 -1.153 C5 YA7 3 YA7 C6 C4 C 0 1 Y N N 34.285 11.423 31.831 2.995 0.958 -0.311 C6 YA7 4 YA7 C7 C5 C 0 1 Y N N 35.079 12.466 32.527 1.576 1.304 -0.046 C7 YA7 5 YA7 C8 C6 C 0 1 Y N N 36.167 12.072 33.312 0.584 0.335 -0.181 C8 YA7 6 YA7 C11 C7 C 0 1 Y N N 38.034 11.342 35.581 -1.482 -1.676 -0.460 C11 YA7 7 YA7 C12 C8 C 0 1 Y N N 39.153 10.912 36.273 -2.490 -2.607 -0.584 C12 YA7 8 YA7 N13 N1 N 0 1 Y N N 40.301 11.569 36.194 -3.748 -2.281 -0.349 N13 YA7 9 YA7 C16 C9 C 0 1 N N N 41.965 14.476 36.235 -5.891 0.350 -0.597 C16 YA7 10 YA7 C17 C10 C 0 1 N N R 42.540 15.594 35.345 -7.350 0.676 -0.264 C17 YA7 11 YA7 C19 C11 C 0 1 N N N 43.237 16.625 36.241 -7.852 1.782 -1.194 C19 YA7 12 YA7 O20 O1 O 0 1 N N N 43.489 15.076 34.390 -8.148 -0.498 -0.443 O20 YA7 13 YA7 C21 C12 C 0 1 N N S 43.033 14.002 33.554 -7.735 -1.603 0.364 C21 YA7 14 YA7 C23 C13 C 0 1 N N N 44.127 13.568 32.574 -8.627 -2.811 0.072 C23 YA7 15 YA7 C24 C14 C 0 1 N N N 42.673 12.817 34.460 -6.280 -1.952 0.038 C24 YA7 16 YA7 C27 C15 C 0 1 Y N N 35.569 14.777 33.061 -0.095 2.927 0.594 C27 YA7 17 YA7 O29 O2 O 0 1 N N N 35.474 17.160 33.139 -1.166 4.957 1.258 O29 YA7 18 YA7 C31 C16 C 0 1 N N N 33.723 14.588 31.647 2.044 3.843 0.582 C31 YA7 19 YA7 C32 C17 C 0 1 Y N N 34.784 13.821 32.395 1.236 2.592 0.343 C32 YA7 20 YA7 C33 C18 C 0 1 Y N N 34.980 10.446 31.122 3.571 -0.170 0.282 C33 YA7 21 YA7 C34 C19 C 0 1 Y N N 34.280 9.456 30.451 4.900 -0.453 0.003 C34 YA7 22 YA7 C37 C20 C 0 1 N N N 37.651 8.302 30.484 4.226 -3.530 -0.848 C37 YA7 23 YA7 O2 O3 O 0 1 N N N 32.187 8.484 29.835 6.909 0.121 -1.136 O2 YA7 24 YA7 N4 N2 N 0 1 Y N N 32.241 10.399 31.179 5.030 1.449 -1.394 N4 YA7 25 YA7 C9 C21 C 0 1 Y N N 36.952 13.007 33.989 -0.746 0.664 0.068 C9 YA7 26 YA7 C10 C22 C 0 1 Y N N 38.109 12.509 34.788 -1.803 -0.369 -0.076 C10 YA7 27 YA7 C14 C23 C 0 1 Y N N 40.422 12.664 35.456 -4.098 -1.056 0.012 C14 YA7 28 YA7 N15 N3 N 0 1 N N N 41.647 13.304 35.397 -5.437 -0.764 0.247 N15 YA7 29 YA7 C25 C24 C 0 1 Y N N 39.349 13.161 34.718 -3.141 -0.062 0.169 C25 YA7 30 YA7 C26 C25 C 0 1 Y N N 36.658 14.370 33.852 -1.088 1.957 0.452 C26 YA7 31 YA7 C28 C26 C 0 1 N N N 35.025 16.111 32.738 -0.150 4.351 0.978 C28 YA7 32 YA7 N30 N4 N 0 1 N N N 33.972 16.006 31.918 1.085 4.881 0.978 N30 YA7 33 YA7 N35 N5 N 0 1 N N N 35.024 8.505 29.756 5.522 -1.571 0.572 N35 YA7 34 YA7 S36 S1 S 0 1 N N N 36.041 7.483 30.571 4.658 -2.962 0.820 S36 YA7 35 YA7 O38 O4 O 0 1 N N N 35.586 7.499 31.918 3.497 -2.534 1.517 O38 YA7 36 YA7 O39 O5 O 0 1 N N N 36.057 6.284 29.800 5.589 -3.850 1.423 O39 YA7 37 YA7 H1 H1 H 0 1 N N N 30.460 7.890 28.842 8.609 0.688 -2.165 H1 YA7 38 YA7 H2 H2 H 0 1 N N N 30.222 9.062 30.182 7.067 1.031 -2.984 H2 YA7 39 YA7 H3 H3 H 0 1 N N N 30.929 9.611 28.624 7.576 2.022 -1.596 H3 YA7 40 YA7 H4 H4 H 0 1 N N N 32.322 12.112 32.370 3.332 2.623 -1.615 H4 YA7 41 YA7 H5 H5 H 0 1 N N N 36.405 11.022 33.396 0.845 -0.669 -0.479 H5 YA7 42 YA7 H6 H6 H 0 1 N N N 37.109 10.789 35.647 -0.456 -1.952 -0.654 H6 YA7 43 YA7 H7 H7 H 0 1 N N N 39.089 10.026 36.888 -2.248 -3.618 -0.876 H7 YA7 44 YA7 H8 H8 H 0 1 N N N 42.707 14.193 36.996 -5.812 0.068 -1.647 H8 YA7 45 YA7 H9 H9 H 0 1 N N N 41.050 14.834 36.730 -5.271 1.226 -0.408 H9 YA7 46 YA7 H10 H10 H 0 1 N N N 41.709 16.087 34.819 -7.421 1.010 0.771 H10 YA7 47 YA7 H11 H11 H 0 1 N N N 42.517 17.023 36.971 -7.782 1.446 -2.229 H11 YA7 48 YA7 H12 H12 H 0 1 N N N 44.071 16.144 36.773 -8.890 2.013 -0.957 H12 YA7 49 YA7 H13 H13 H 0 1 N N N 43.623 17.448 35.621 -7.241 2.675 -1.060 H13 YA7 50 YA7 H14 H14 H 0 1 N N N 42.141 14.307 32.987 -7.817 -1.336 1.418 H14 YA7 51 YA7 H15 H15 H 0 1 N N N 43.753 12.746 31.947 -8.542 -3.079 -0.982 H15 YA7 52 YA7 H16 H16 H 0 1 N N N 44.405 14.419 31.935 -8.312 -3.654 0.687 H16 YA7 53 YA7 H17 H17 H 0 1 N N N 45.009 13.228 33.136 -9.663 -2.561 0.301 H17 YA7 54 YA7 H18 H18 H 0 1 N N N 42.275 11.986 33.859 -5.943 -2.757 0.691 H18 YA7 55 YA7 H19 H19 H 0 1 N N N 43.562 12.477 35.012 -6.207 -2.271 -1.002 H19 YA7 56 YA7 H20 H20 H 0 1 N N N 32.723 14.302 32.005 2.763 3.672 1.384 H20 YA7 57 YA7 H21 H21 H 0 1 N N N 36.060 10.460 31.095 2.996 -0.805 0.940 H21 YA7 58 YA7 H22 H22 H 0 1 N N N 38.403 7.691 31.005 5.138 -3.712 -1.418 H22 YA7 59 YA7 H23 H23 H 0 1 N N N 37.944 8.424 29.431 3.649 -4.452 -0.780 H23 YA7 60 YA7 H24 H24 H 0 1 N N N 37.586 9.290 30.963 3.632 -2.765 -1.349 H24 YA7 61 YA7 H25 H25 H 0 1 N N N 39.471 14.038 34.099 -3.429 0.935 0.468 H25 YA7 62 YA7 H26 H26 H 0 1 N N N 37.267 15.107 34.353 -2.120 2.208 0.645 H26 YA7 63 YA7 H27 H27 H 0 1 N N N 34.369 7.929 29.266 6.459 -1.531 0.821 H27 YA7 64 YA7 H28 H28 H 0 1 N N N 33.798 14.388 30.568 2.562 4.140 -0.329 H28 YA7 65 YA7 H29 H29 H 0 1 N N N 33.442 16.770 31.551 1.306 5.800 1.199 H29 YA7 66 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YA7 C1 O2 SING N N 1 YA7 N35 C34 SING N N 2 YA7 N35 S36 SING N N 3 YA7 O39 S36 DOUB N N 4 YA7 O2 C3 SING N N 5 YA7 C34 C3 DOUB Y N 6 YA7 C34 C33 SING Y N 7 YA7 C37 S36 SING N N 8 YA7 C3 N4 SING Y N 9 YA7 S36 O38 DOUB N N 10 YA7 C33 C6 DOUB Y N 11 YA7 N4 C5 DOUB Y N 12 YA7 C31 N30 SING N N 13 YA7 C31 C32 SING N N 14 YA7 C6 C5 SING Y N 15 YA7 C6 C7 SING N N 16 YA7 N30 C28 SING N N 17 YA7 C32 C7 DOUB Y N 18 YA7 C32 C27 SING Y N 19 YA7 C7 C8 SING Y N 20 YA7 C23 C21 SING N N 21 YA7 C28 C27 SING N N 22 YA7 C28 O29 DOUB N N 23 YA7 C27 C26 DOUB Y N 24 YA7 C8 C9 DOUB Y N 25 YA7 C21 O20 SING N N 26 YA7 C21 C24 SING N N 27 YA7 C26 C9 SING Y N 28 YA7 C9 C10 SING N N 29 YA7 O20 C17 SING N N 30 YA7 C24 N15 SING N N 31 YA7 C25 C10 DOUB Y N 32 YA7 C25 C14 SING Y N 33 YA7 C10 C11 SING Y N 34 YA7 C17 C16 SING N N 35 YA7 C17 C19 SING N N 36 YA7 N15 C14 SING N N 37 YA7 N15 C16 SING N N 38 YA7 C14 N13 DOUB Y N 39 YA7 C11 C12 DOUB Y N 40 YA7 N13 C12 SING Y N 41 YA7 C1 H1 SING N N 42 YA7 C1 H2 SING N N 43 YA7 C1 H3 SING N N 44 YA7 C5 H4 SING N N 45 YA7 C8 H5 SING N N 46 YA7 C11 H6 SING N N 47 YA7 C12 H7 SING N N 48 YA7 C16 H8 SING N N 49 YA7 C16 H9 SING N N 50 YA7 C17 H10 SING N N 51 YA7 C19 H11 SING N N 52 YA7 C19 H12 SING N N 53 YA7 C19 H13 SING N N 54 YA7 C21 H14 SING N N 55 YA7 C23 H15 SING N N 56 YA7 C23 H16 SING N N 57 YA7 C23 H17 SING N N 58 YA7 C24 H18 SING N N 59 YA7 C24 H19 SING N N 60 YA7 C31 H20 SING N N 61 YA7 C33 H21 SING N N 62 YA7 C37 H22 SING N N 63 YA7 C37 H23 SING N N 64 YA7 C37 H24 SING N N 65 YA7 C25 H25 SING N N 66 YA7 C26 H26 SING N N 67 YA7 N35 H27 SING N N 68 YA7 C31 H28 SING N N 69 YA7 N30 H29 SING N N 70 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YA7 InChI InChI 1.03 "InChI=1S/C26H29N5O5S/c1-15-13-31(14-16(2)36-15)24-10-17(5-6-27-24)18-7-20(22-12-28-25(32)21(22)8-18)19-9-23(30-37(4,33)34)26(35-3)29-11-19/h5-11,15-16,30H,12-14H2,1-4H3,(H,28,32)/t15-,16+" YA7 InChIKey InChI 1.03 BTLBFTXHIOZUGF-IYBDPMFKSA-N YA7 SMILES_CANONICAL CACTVS 3.385 "COc1ncc(cc1N[S](C)(=O)=O)c2cc(cc3C(=O)NCc23)c4ccnc(c4)N5C[C@@H](C)O[C@@H](C)C5" YA7 SMILES CACTVS 3.385 "COc1ncc(cc1N[S](C)(=O)=O)c2cc(cc3C(=O)NCc23)c4ccnc(c4)N5C[CH](C)O[CH](C)C5" YA7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H]1CN(C[C@@H](O1)C)c2cc(ccn2)c3cc(c4c(c3)C(=O)NC4)c5cc(c(nc5)OC)NS(=O)(=O)C" YA7 SMILES "OpenEye OEToolkits" 2.0.7 "CC1CN(CC(O1)C)c2cc(ccn2)c3cc(c4c(c3)C(=O)NC4)c5cc(c(nc5)OC)NS(=O)(=O)C" # _pdbx_chem_comp_identifier.comp_id YA7 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[5-[6-[2-[(2~{S},6~{R})-2,6-dimethylmorpholin-4-yl]pyridin-4-yl]-1-oxidanylidene-2,3-dihydroisoindol-4-yl]-2-methoxy-pyridin-3-yl]methanesulfonamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YA7 "Create component" 2021-02-15 RCSB YA7 "Modify name" 2021-02-16 RCSB YA7 "Initial release" 2022-02-16 RCSB ##