data_YAF # _chem_comp.id YAF _chem_comp.name "[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4S)-5-[(1R,3S,3aS,13R)-3-[3-(dimethylcarbamoyl)phenyl]-1-hydroxy-10,11-dimethyl-4,6-dioxo-2,3,5,6-tetrahydro-1H-benzo[g]pyrrolo[2,1-e]pteridin-8(4H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate (non-preferred name)" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C39 H48 N10 O17 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-01-19 _chem_comp.pdbx_modified_date 2024-08-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 990.803 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YAF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8FRV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YAF C4 C1 C 0 1 Y N N N N N -6.904 59.919 83.467 5.845 0.250 1.478 C4 YAF 1 YAF C14 C2 C 0 1 Y N N N N N -7.072 52.687 84.740 8.210 -1.279 -0.131 C14 YAF 2 YAF C5 C3 C 0 1 Y N N N N N -7.362 59.300 82.345 6.481 1.279 2.163 C5 YAF 3 YAF C6 C4 C 0 1 Y N N N N N -7.278 59.889 81.108 7.255 0.980 3.280 C6 YAF 4 YAF C11 C5 C 0 1 N N S N N N -7.072 56.008 83.097 7.480 2.423 -0.341 C11 YAF 5 YAF C7 C6 C 0 1 Y N N N N N -6.708 61.117 80.979 7.386 -0.328 3.704 C7 YAF 6 YAF C8 C7 C 0 1 N N N N N N -6.600 61.775 79.642 8.226 -0.644 4.915 C8 YAF 7 YAF C9 C8 C 0 1 N N R N N N -7.516 57.275 81.282 7.705 3.260 1.950 C9 YAF 8 YAF C10 C9 C 0 1 N N N N N N -6.362 56.469 81.845 8.528 2.771 0.738 C10 YAF 9 YAF C12 C10 C 0 1 Y N N N N N -6.514 54.889 83.948 7.556 0.960 -0.695 C12 YAF 10 YAF C13 C11 C 0 1 Y N N N N N -7.379 53.818 84.023 8.137 0.066 0.186 C13 YAF 11 YAF N1 N1 N 0 1 N N N N N N -7.917 58.086 82.379 6.370 2.619 1.768 N1 YAF 12 YAF N2 N2 N 0 1 N N N N N N -2.530 53.522 85.502 6.929 -2.534 -3.981 N2 YAF 13 YAF C3 C12 C 0 1 Y N N N N N -6.330 61.172 83.362 5.985 -1.063 1.906 C3 YAF 14 YAF N3 N3 N 0 1 N N N N N N -9.577 56.316 84.890 4.732 4.416 -0.867 N3 YAF 15 YAF C1 C13 C 0 1 N N N N N N -5.607 63.130 82.002 6.897 -2.774 3.489 C1 YAF 16 YAF C15 C14 C 0 1 Y N N N N N -5.873 52.626 85.392 7.705 -1.737 -1.330 C15 YAF 17 YAF C16 C15 C 0 1 Y N N N N N -4.972 53.670 85.326 7.113 -0.841 -2.222 C16 YAF 18 YAF C17 C16 C 0 1 N N N N N N -3.716 53.418 86.099 6.568 -1.324 -3.508 C17 YAF 19 YAF C18 C17 C 0 1 N N N N N N -1.321 53.625 86.301 6.538 -2.938 -5.333 C18 YAF 20 YAF C19 C18 C 0 1 N N N N N N -2.325 53.464 84.061 7.711 -3.444 -3.141 C19 YAF 21 YAF C2 C19 C 0 1 Y N N N N N -6.226 61.776 82.142 6.750 -1.349 3.021 C2 YAF 22 YAF C20 C20 C 0 1 Y N N N N N -5.293 54.809 84.600 7.036 0.513 -1.893 C20 YAF 23 YAF C21 C21 C 0 1 N N S N N N -7.846 57.264 83.567 6.123 2.747 0.318 C21 YAF 24 YAF C22 C22 C 0 1 N N N N N N -9.172 56.610 83.681 5.747 4.162 -0.024 C22 YAF 25 YAF C23 C23 C 0 1 N N N N N N -8.932 56.785 85.971 3.993 3.421 -1.385 C23 YAF 26 YAF C24 C24 C 0 1 N N N N N N -7.621 58.083 84.787 5.073 1.787 -0.147 C24 YAF 27 YAF C25 C25 C 0 1 N N N N N N -6.453 59.890 85.898 4.258 -0.524 -0.283 C25 YAF 28 YAF C26 C26 C 0 1 N N S N N N -7.375 60.832 86.565 2.865 -0.547 0.350 C26 YAF 29 YAF C27 C27 C 0 1 N N S N N N -6.617 61.737 87.520 2.024 -1.643 -0.309 C27 YAF 30 YAF C28 C28 C 0 1 N N R N N N -7.499 62.388 88.562 0.632 -1.666 0.324 C28 YAF 31 YAF C29 C29 C 0 1 N N N N N N -6.684 63.206 89.525 -0.209 -2.761 -0.335 C29 YAF 32 YAF C30 C30 C 0 1 N N N N N N -6.111 69.681 89.614 -8.012 -2.525 0.575 C30 YAF 33 YAF C31 C31 C 0 1 N N R N N N -6.906 70.943 89.730 -8.605 -1.326 1.317 C31 YAF 34 YAF C32 C32 C 0 1 N N R N N N -6.225 73.029 89.093 -9.263 0.837 0.818 C32 YAF 35 YAF C33 C33 C 0 1 Y N N N N N -3.941 73.616 88.466 -8.474 1.816 -1.370 C33 YAF 36 YAF C34 C34 C 0 1 Y N N N N N -3.787 75.537 89.312 -9.309 3.816 -1.286 C34 YAF 37 YAF C35 C35 C 0 1 Y N N N N N -3.472 76.809 89.782 -9.735 5.143 -1.470 C35 YAF 38 YAF C36 C36 C 0 1 Y N N N N N -5.588 76.886 90.657 -10.799 5.048 0.576 C36 YAF 39 YAF C37 C37 C 0 1 Y N N N N N -5.035 75.076 89.582 -9.684 3.157 -0.104 C37 YAF 40 YAF C38 C38 C 0 1 N N R N N N -6.609 72.294 87.838 -10.522 -0.028 0.554 C38 YAF 41 YAF C39 C39 C 0 1 N N S N N N -7.643 71.390 88.472 -10.144 -1.367 1.234 C39 YAF 42 YAF N10 N4 N 0 1 Y N N N N N -5.999 75.704 90.247 -10.422 3.805 0.791 N10 YAF 43 YAF N4 N5 N 0 1 N N N N N N -8.025 57.692 85.929 4.133 2.154 -0.980 N4 YAF 44 YAF N5 N6 N 0 1 N N N N N N -7.030 59.270 84.698 5.063 0.525 0.348 N5 YAF 45 YAF N6 N7 N 0 1 Y N N N N N -5.103 73.845 89.032 -9.143 1.898 -0.185 N6 YAF 46 YAF N7 N8 N 0 1 Y N N N N N -3.095 74.597 88.593 -8.573 2.943 -2.014 N7 YAF 47 YAF N8 N9 N 0 1 N N N N N N -2.313 77.400 89.587 -9.397 5.843 -2.615 N8 YAF 48 YAF N9 N10 N 0 1 Y N N N N N -4.410 77.468 90.471 -10.470 5.709 -0.519 N9 YAF 49 YAF O1 O1 O 0 1 N N N N N N -8.618 56.500 81.036 7.583 4.684 1.931 O1 YAF 50 YAF O10 O2 O 0 1 N N N N N N -7.562 66.174 91.312 -2.832 -3.665 -1.775 O10 YAF 51 YAF O11 O3 O 0 1 N N N N N N -5.782 66.446 89.786 -4.101 -3.286 0.374 O11 YAF 52 YAF O12 O4 O 0 1 N N N N N N -7.938 66.660 88.758 -5.976 -5.090 0.752 O12 YAF 53 YAF O13 O5 O 0 1 N N N N N N -5.853 67.773 87.830 -5.876 -3.722 -1.367 O13 YAF 54 YAF O14 O6 O 0 1 N N N N N N -6.939 68.567 89.866 -6.593 -2.535 0.742 O14 YAF 55 YAF O15 O7 O 0 1 N N N N N N -5.964 71.996 89.984 -8.175 -0.104 0.695 O15 YAF 56 YAF O16 O8 O 0 1 N N N N N N -7.196 73.214 86.963 -11.675 0.549 1.170 O16 YAF 57 YAF O17 O9 O 0 1 N N N N N N -8.724 72.230 88.830 -10.714 -1.442 2.542 O17 YAF 58 YAF O2 O10 O 0 1 N N N N N N -3.808 52.983 87.236 5.795 -0.631 -4.140 O2 YAF 59 YAF O3 O11 O 0 1 N N N N N N -9.812 56.315 82.711 6.367 5.082 0.464 O3 YAF 60 YAF O4 O12 O 0 1 N N N N N N -9.243 56.356 87.038 3.175 3.680 -2.248 O4 YAF 61 YAF O5 O13 O 0 1 N N N N N N -7.814 61.634 85.570 2.982 -0.813 1.749 O5 YAF 62 YAF O6 O14 O 0 1 N N N N N N -5.718 60.985 88.217 1.907 -1.376 -1.708 O6 YAF 63 YAF O7 O15 O 0 1 N N N N N N -8.430 63.199 87.873 0.749 -1.932 1.723 O7 YAF 64 YAF O8 O16 O 0 1 N N N N N N -7.282 64.455 89.862 -1.544 -2.707 0.173 O8 YAF 65 YAF O9 O17 O 0 1 N N N N N N -5.522 64.825 91.643 -2.329 -5.216 0.151 O9 YAF 66 YAF P1 P1 P 0 1 N N N N N N -6.466 65.441 90.732 -2.704 -3.718 -0.302 P1 YAF 67 YAF P2 P2 P 0 1 N N N N N N -6.683 67.359 88.938 -5.641 -3.660 0.093 P2 YAF 68 YAF H1 H1 H 0 1 N N N N N N -7.766 51.861 84.787 8.669 -1.972 0.560 H1 YAF 69 YAF H2 H2 H 0 1 N N N N N N -7.664 59.378 80.238 7.754 1.772 3.818 H2 YAF 70 YAF H3 H3 H 0 1 N N N N N N -7.906 55.465 82.629 7.627 3.036 -1.230 H3 YAF 71 YAF H4 H4 H 0 1 N N N N N N -7.502 62.377 79.455 7.602 -0.609 5.808 H4 YAF 72 YAF H5 H5 H 0 1 N N N N N N -5.714 62.427 79.625 8.654 -1.641 4.810 H5 YAF 73 YAF H6 H6 H 0 1 N N N N N N -6.504 61.006 78.862 9.028 0.089 5.002 H6 YAF 74 YAF H7 H7 H 0 1 N N N N N N -7.196 57.869 80.413 8.164 2.929 2.882 H7 YAF 75 YAF H8 H8 H 0 1 N N N N N N -6.071 55.633 81.192 9.107 1.887 1.004 H8 YAF 76 YAF H9 H9 H 0 1 N N N N N N -5.480 57.089 82.063 9.188 3.563 0.383 H9 YAF 77 YAF H10 H10 H 0 1 N N N N N N -8.324 53.870 83.504 8.534 0.419 1.126 H10 YAF 78 YAF H11 H11 H 0 1 N N N N N N -5.964 61.674 84.246 5.491 -1.861 1.371 H11 YAF 79 YAF H12 H12 H 0 1 N N N N N N -10.380 55.732 85.011 4.528 5.334 -1.104 H12 YAF 80 YAF H13 H13 H 0 1 N N N N N N -6.384 63.902 82.105 6.107 -3.005 4.203 H13 YAF 81 YAF H14 H14 H 0 1 N N N N N N -4.847 63.268 82.785 6.823 -3.446 2.634 H14 YAF 82 YAF H15 H15 H 0 1 N N N N N N -5.134 63.216 81.013 7.868 -2.901 3.967 H15 YAF 83 YAF H16 H16 H 0 1 N N N N N N -5.626 51.747 85.968 7.767 -2.786 -1.579 H16 YAF 84 YAF H17 H17 H 0 1 N N N N N N -1.588 53.662 87.368 7.310 -2.635 -6.041 H17 YAF 85 YAF H18 H18 H 0 1 N N N N N N -0.682 52.750 86.113 6.418 -4.021 -5.369 H18 YAF 86 YAF H19 H19 H 0 1 N N N N N N -0.778 54.541 86.027 5.595 -2.460 -5.597 H19 YAF 87 YAF H20 H20 H 0 1 N N N N N N -1.254 53.576 83.838 7.102 -3.778 -2.301 H20 YAF 88 YAF H21 H21 H 0 1 N N N N N N -2.680 52.495 83.679 8.021 -4.307 -3.731 H21 YAF 89 YAF H22 H22 H 0 1 N N N N N N -2.887 54.277 83.578 8.594 -2.925 -2.767 H22 YAF 90 YAF H23 H23 H 0 1 N N N N N N -4.594 55.630 84.543 6.582 1.212 -2.580 H23 YAF 91 YAF H25 H25 H 0 1 N N N N N N -6.190 59.095 86.611 4.740 -1.490 -0.136 H25 YAF 92 YAF H26 H26 H 0 1 N N N N N N -5.544 60.437 85.607 4.169 -0.321 -1.350 H26 YAF 93 YAF H27 H27 H 0 1 N N N N N N -8.183 60.300 87.089 2.383 0.419 0.203 H27 YAF 94 YAF H28 H28 H 0 1 N N N N N N -6.111 62.522 86.940 2.507 -2.609 -0.162 H28 YAF 95 YAF H29 H29 H 0 1 N N N N N N -8.025 61.600 89.121 0.149 -0.700 0.177 H29 YAF 96 YAF H30 H30 H 0 1 N N N N N N -6.550 62.624 90.449 -0.225 -2.608 -1.414 H30 YAF 97 YAF H31 H31 H 0 1 N N N N N N -5.702 63.402 89.070 0.225 -3.736 -0.113 H31 YAF 98 YAF H32 H32 H 0 1 N N N N N N -5.695 69.604 88.599 -8.432 -3.447 0.979 H32 YAF 99 YAF H33 H33 H 0 1 N N N N N N -5.290 69.698 90.346 -8.253 -2.451 -0.486 H33 YAF 100 YAF H34 H34 H 0 1 N N N N N N -7.622 70.856 90.560 -8.288 -1.342 2.360 H34 YAF 101 YAF H35 H35 H 0 1 N N N N N N -7.094 73.610 89.435 -9.292 1.261 1.822 H35 YAF 102 YAF H36 H36 H 0 1 N N N N N N -3.709 72.700 87.944 -7.938 0.947 -1.720 H36 YAF 103 YAF H37 H37 H 0 1 N N N N N N -6.308 77.460 91.222 -11.398 5.546 1.324 H37 YAF 104 YAF H38 H38 H 0 1 N N N N N N -5.769 71.731 87.406 -10.682 -0.167 -0.515 H38 YAF 105 YAF H39 H39 H 0 1 N N N N N N -7.921 70.545 87.825 -10.471 -2.209 0.626 H39 YAF 106 YAF H41 H41 H 0 1 N N N N N N -2.323 78.304 90.014 -8.860 5.419 -3.302 H41 YAF 107 YAF H42 H42 H 0 1 N N N N N N -1.585 76.848 89.994 -9.697 6.758 -2.730 H42 YAF 108 YAF H43 H43 H 0 1 N N N N N N -9.143 56.436 81.825 8.428 5.152 1.987 H43 YAF 109 YAF H44 H44 H 0 1 N N N N N N -8.101 66.534 87.831 -5.844 -5.123 1.709 H44 YAF 110 YAF H45 H45 H 0 1 N N N N N N -6.522 73.765 86.583 -12.469 -0.000 1.110 H45 YAF 111 YAF H46 H46 H 0 1 N N N N N N -9.408 71.711 89.236 -11.680 -1.411 2.553 H46 YAF 112 YAF H47 H47 H 0 1 N N N N N N -8.419 62.275 85.923 3.404 -1.659 1.954 H47 YAF 113 YAF H48 H48 H 0 1 N N N N N N -5.237 61.542 88.818 1.486 -0.531 -1.914 H48 YAF 114 YAF H49 H49 H 0 1 N N N N N N -9.003 63.626 88.499 1.170 -2.778 1.929 H49 YAF 115 YAF H50 H50 H 0 1 N N N N N N -5.781 65.007 92.539 -2.230 -5.325 1.107 H50 YAF 116 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YAF C8 C7 SING N N 1 YAF C7 C6 DOUB Y N 2 YAF C7 C2 SING Y N 3 YAF O1 C9 SING N N 4 YAF C6 C5 SING Y N 5 YAF C9 C10 SING N N 6 YAF C9 N1 SING N N 7 YAF C10 C11 SING N N 8 YAF C1 C2 SING N N 9 YAF C2 C3 DOUB Y N 10 YAF C5 N1 SING N N 11 YAF C5 C4 DOUB Y N 12 YAF N1 C21 SING N N 13 YAF O3 C22 DOUB N N 14 YAF C11 C21 SING N N 15 YAF C11 C12 SING N N 16 YAF C3 C4 SING Y N 17 YAF C4 N5 SING N N 18 YAF C21 C22 SING N N 19 YAF C21 C24 SING N N 20 YAF C22 N3 SING N N 21 YAF C12 C13 DOUB Y N 22 YAF C12 C20 SING Y N 23 YAF C13 C14 SING Y N 24 YAF C19 N2 SING N N 25 YAF C20 C16 DOUB Y N 26 YAF N5 C24 SING N N 27 YAF N5 C25 SING N N 28 YAF C14 C15 DOUB Y N 29 YAF C24 N4 DOUB N N 30 YAF N3 C23 SING N N 31 YAF C16 C15 SING Y N 32 YAF C16 C17 SING N N 33 YAF N2 C17 SING N N 34 YAF N2 C18 SING N N 35 YAF O5 C26 SING N N 36 YAF C25 C26 SING N N 37 YAF N4 C23 SING N N 38 YAF C23 O4 DOUB N N 39 YAF C17 O2 DOUB N N 40 YAF C26 C27 SING N N 41 YAF O16 C38 SING N N 42 YAF C27 O6 SING N N 43 YAF C27 C28 SING N N 44 YAF O13 P2 DOUB N N 45 YAF C38 C39 SING N N 46 YAF C38 C32 SING N N 47 YAF O7 C28 SING N N 48 YAF C33 N7 DOUB Y N 49 YAF C33 N6 SING Y N 50 YAF C39 O17 SING N N 51 YAF C39 C31 SING N N 52 YAF C28 C29 SING N N 53 YAF N7 C34 SING Y N 54 YAF O12 P2 SING N N 55 YAF P2 O11 SING N N 56 YAF P2 O14 SING N N 57 YAF N6 C32 SING N N 58 YAF N6 C37 SING Y N 59 YAF C32 O15 SING N N 60 YAF C34 C37 DOUB Y N 61 YAF C34 C35 SING Y N 62 YAF C29 O8 SING N N 63 YAF C37 N10 SING Y N 64 YAF N8 C35 SING N N 65 YAF C30 C31 SING N N 66 YAF C30 O14 SING N N 67 YAF C31 O15 SING N N 68 YAF C35 N9 DOUB Y N 69 YAF O11 P1 SING N N 70 YAF O8 P1 SING N N 71 YAF N10 C36 DOUB Y N 72 YAF N9 C36 SING Y N 73 YAF P1 O10 DOUB N N 74 YAF P1 O9 SING N N 75 YAF C14 H1 SING N N 76 YAF C6 H2 SING N N 77 YAF C11 H3 SING N N 78 YAF C8 H4 SING N N 79 YAF C8 H5 SING N N 80 YAF C8 H6 SING N N 81 YAF C9 H7 SING N N 82 YAF C10 H8 SING N N 83 YAF C10 H9 SING N N 84 YAF C13 H10 SING N N 85 YAF C3 H11 SING N N 86 YAF N3 H12 SING N N 87 YAF C1 H13 SING N N 88 YAF C1 H14 SING N N 89 YAF C1 H15 SING N N 90 YAF C15 H16 SING N N 91 YAF C18 H17 SING N N 92 YAF C18 H18 SING N N 93 YAF C18 H19 SING N N 94 YAF C19 H20 SING N N 95 YAF C19 H21 SING N N 96 YAF C19 H22 SING N N 97 YAF C20 H23 SING N N 98 YAF C25 H25 SING N N 99 YAF C25 H26 SING N N 100 YAF C26 H27 SING N N 101 YAF C27 H28 SING N N 102 YAF C28 H29 SING N N 103 YAF C29 H30 SING N N 104 YAF C29 H31 SING N N 105 YAF C30 H32 SING N N 106 YAF C30 H33 SING N N 107 YAF C31 H34 SING N N 108 YAF C32 H35 SING N N 109 YAF C33 H36 SING N N 110 YAF C36 H37 SING N N 111 YAF C38 H38 SING N N 112 YAF C39 H39 SING N N 113 YAF N8 H41 SING N N 114 YAF N8 H42 SING N N 115 YAF O1 H43 SING N N 116 YAF O12 H44 SING N N 117 YAF O16 H45 SING N N 118 YAF O17 H46 SING N N 119 YAF O5 H47 SING N N 120 YAF O6 H48 SING N N 121 YAF O7 H49 SING N N 122 YAF O9 H50 SING N N 123 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YAF SMILES ACDLabs 12.01 "CN(C)C(=O)c1cccc(c1)C1CC(O)N2c3cc(C)c(C)cc3N(CC(O)C(O)C(O)COP(=O)(O)OP(=O)(O)OCC3OC(n4cnc5c(N)ncnc54)C(O)C3O)C3=NC(=O)NC(=O)C123" YAF InChI InChI 1.06 "InChI=1S/C39H48N10O17P2/c1-17-8-22-23(9-18(17)2)49-27(52)11-21(19-6-5-7-20(10-19)34(56)46(3)4)39(49)36(44-38(58)45-37(39)57)47(22)12-24(50)29(53)25(51)13-63-67(59,60)66-68(61,62)64-14-26-30(54)31(55)35(65-26)48-16-43-28-32(40)41-15-42-33(28)48/h5-10,15-16,21,24-27,29-31,35,50-55H,11-14H2,1-4H3,(H,59,60)(H,61,62)(H2,40,41,42)(H,45,57,58)/t21-,24-,25+,26+,27+,29-,30+,31+,35+,39-/m0/s1" YAF InChIKey InChI 1.06 CXEZEWPFZUPPDK-SIXGFUEYSA-N YAF SMILES_CANONICAL CACTVS 3.385 "CN(C)C(=O)c1cccc(c1)[C@@H]2C[C@@H](O)N3c4cc(C)c(C)cc4N(C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(=O)O[P](O)(=O)OC[C@H]5O[C@H]([C@H](O)[C@@H]5O)n6cnc7c(N)ncnc67)C8=NC(=O)NC(=O)[C@@]238" YAF SMILES CACTVS 3.385 "CN(C)C(=O)c1cccc(c1)[CH]2C[CH](O)N3c4cc(C)c(C)cc4N(C[CH](O)[CH](O)[CH](O)CO[P](O)(=O)O[P](O)(=O)OC[CH]5O[CH]([CH](O)[CH]5O)n6cnc7c(N)ncnc67)C8=NC(=O)NC(=O)[C]238" YAF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc2c(cc1C)N3[C@@H](C[C@H]([C@]34C(=O)NC(=O)N=C4N2C[C@@H]([C@@H]([C@@H](COP(=O)(O)OP(=O)(O)OC[C@@H]5[C@H]([C@H]([C@@H](O5)n6cnc7c6ncnc7N)O)O)O)O)O)c8cccc(c8)C(=O)N(C)C)O" YAF SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc2c(cc1C)N3C(CC(C34C(=O)NC(=O)N=C4N2CC(C(C(COP(=O)(O)OP(=O)(O)OCC5C(C(C(O5)n6cnc7c6ncnc7N)O)O)O)O)O)c8cccc(c8)C(=O)N(C)C)O" # _pdbx_chem_comp_identifier.comp_id YAF _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4S)-5-[(1R,3S,3aS,13R)-3-[3-(dimethylcarbamoyl)phenyl]-1-hydroxy-10,11-dimethyl-4,6-dioxo-2,3,5,6-tetrahydro-1H-benzo[g]pyrrolo[2,1-e]pteridin-8(4H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate (non-preferred name)" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YAF "Create component" 2023-01-20 RCSB YAF "Initial release" 2024-08-07 RCSB #