data_YAL # _chem_comp.id YAL _chem_comp.name "(4~{S})-6-[(2-chloranyl-4-methyl-phenyl)amino]-4-[4-cyclopropyl-5-[3-(2,2-dimethylpropyl)cyclobutyl]-1,2-oxazol-3-yl]-6-oxidanylidene-hexanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H37 Cl N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-11-28 _chem_comp.pdbx_modified_date 2024-11-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 501.057 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YAL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8X7E _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YAL C4 C1 C 0 1 N N N N N N -34.408 -5.993 13.558 1.468 0.593 -0.239 C4 YAL 1 YAL C5 C2 C 0 1 N N S N N N -34.120 -5.009 12.407 0.648 -0.648 0.121 C5 YAL 2 YAL C6 C3 C 0 1 Y N N N N N -38.088 -6.134 14.555 5.181 1.084 0.145 C6 YAL 3 YAL N2 N1 N 0 1 N N N N N N -36.720 -5.875 14.300 3.823 1.334 -0.084 N2 YAL 4 YAL C7 C4 C 0 1 Y N N N N N -38.629 -7.418 14.536 5.566 0.101 1.046 C7 YAL 5 YAL C8 C5 C 0 1 Y N N N N N -39.988 -7.630 14.800 6.907 -0.144 1.269 C8 YAL 6 YAL C9 C6 C 0 1 Y N N N N N -40.838 -6.560 15.094 7.866 0.590 0.596 C9 YAL 7 YAL C10 C7 C 0 1 Y N N N N N -40.307 -5.265 15.114 7.488 1.571 -0.302 C10 YAL 8 YAL C11 C8 C 0 1 Y N N N N N -38.949 -5.059 14.852 6.148 1.816 -0.535 C11 YAL 9 YAL C12 C9 C 0 1 N N N N N N -32.729 -4.338 12.523 1.040 -1.804 -0.801 C12 YAL 10 YAL C13 C10 C 0 1 N N N N N N -31.639 -5.011 11.691 0.331 -3.081 -0.348 C13 YAL 11 YAL C14 C11 C 0 1 Y N N N N N -35.168 -3.934 12.269 -0.819 -0.346 -0.046 C14 YAL 12 YAL C17 C12 C 0 1 Y N N N N N -36.896 -2.704 11.653 -2.958 -0.092 0.296 C17 YAL 13 YAL C18 C13 C 0 1 Y N N N N N -36.280 -3.903 11.387 -1.829 -0.485 0.933 C18 YAL 14 YAL C19 C14 C 0 1 N N N N N N -36.601 -5.030 10.424 -1.684 -0.961 2.355 C19 YAL 15 YAL C20 C15 C 0 1 N N N N N N -35.664 -5.507 9.348 -2.013 0.034 3.470 C20 YAL 16 YAL C21 C16 C 0 1 N N N N N N -36.850 -4.680 8.976 -0.559 -0.350 3.193 C21 YAL 17 YAL C22 C17 C 0 1 N N N N N N -38.135 -2.124 11.016 -4.349 -0.039 0.875 C22 YAL 18 YAL C23 C18 C 0 1 N N N N N N -39.131 -1.400 11.955 -5.359 -0.929 0.132 C23 YAL 19 YAL C24 C19 C 0 1 N N N N N N -40.277 -2.148 11.225 -6.376 0.211 0.311 C24 YAL 20 YAL C25 C20 C 0 1 N N N N N N -39.227 -3.194 10.793 -5.173 1.165 0.390 C25 YAL 21 YAL C26 C21 C 0 1 N N N N N N -41.388 -2.799 12.038 -7.261 0.440 -0.915 C26 YAL 22 YAL C27 C22 C 0 1 N N N N N N -42.633 -1.918 12.261 -8.313 1.503 -0.593 C27 YAL 23 YAL C28 C23 C 0 1 N N N N N N -42.281 -0.425 12.288 -7.616 2.812 -0.215 C28 YAL 24 YAL C29 C24 C 0 1 N N N N N N -43.203 -2.295 13.644 -9.198 1.733 -1.820 C29 YAL 25 YAL C30 C25 C 0 1 N N N N N N -42.291 -6.802 15.369 9.329 0.320 0.842 C30 YAL 26 YAL C31 C26 C 0 1 N N N N N N -35.823 -6.573 13.517 2.918 0.352 0.095 C31 YAL 27 YAL C32 C27 C 0 1 N N N N N N -30.497 -4.088 11.253 0.811 -4.244 -1.178 C32 YAL 28 YAL C35 C28 C 0 1 N N N N N N -43.704 -2.174 11.189 -9.176 1.028 0.577 C35 YAL 29 YAL N15 N2 N 0 1 Y N N N N N -35.108 -2.817 13.013 -1.406 0.098 -1.120 N15 YAL 30 YAL O16 O1 O 0 1 Y N N N N N -36.188 -2.056 12.626 -2.594 0.244 -0.949 O16 YAL 31 YAL O3 O2 O 0 1 N N N N N N -36.086 -7.564 12.843 3.269 -0.726 0.525 O3 YAL 32 YAL O33 O3 O 0 1 N N N N N N -30.398 -3.037 11.948 1.635 -4.069 -2.043 O33 YAL 33 YAL O34 O4 O 0 1 N N N N N N -29.809 -4.471 10.264 0.322 -5.474 -0.955 O34 YAL 34 YAL CL1 CL1 CL 0 0 N N N N N N -38.381 -3.427 14.907 5.673 3.047 -1.663 CL1 YAL 35 YAL H37 H1 H 0 1 N N N N N N -33.688 -6.823 13.497 1.370 0.796 -1.306 H37 YAL 36 YAL H38 H2 H 0 1 N N N N N N -34.275 -5.463 14.512 1.102 1.448 0.329 H38 YAL 37 YAL H39 H3 H 0 1 N N N N N N -34.120 -5.593 11.475 0.846 -0.926 1.156 H39 YAL 38 YAL H36 H4 H 0 1 N N N N N N -36.348 -5.066 14.755 3.533 2.214 -0.371 H36 YAL 39 YAL H40 H5 H 0 1 N N N N N N -37.992 -8.261 14.315 4.817 -0.472 1.572 H40 YAL 40 YAL H41 H6 H 0 1 N N N N N N -40.385 -8.634 14.776 7.206 -0.908 1.970 H41 YAL 41 YAL H42 H7 H 0 1 N N N N N N -40.947 -4.423 15.332 8.240 2.142 -0.826 H42 YAL 42 YAL H44 H8 H 0 1 N N N N N N -32.421 -4.362 13.579 0.746 -1.568 -1.824 H44 YAL 43 YAL H43 H9 H 0 1 N N N N N N -32.821 -3.293 12.191 2.119 -1.953 -0.759 H43 YAL 44 YAL H45 H10 H 0 1 N N N N N N -32.108 -5.427 10.787 0.554 -3.267 0.703 H45 YAL 45 YAL H46 H11 H 0 1 N N N N N N -31.208 -5.827 12.289 -0.746 -2.964 -0.475 H46 YAL 46 YAL H47 H12 H 0 1 N N N N N N -37.268 -5.804 10.831 -1.928 -2.009 2.528 H47 YAL 47 YAL H49 H13 H 0 1 N N N N N N -34.653 -5.081 9.273 -2.336 1.032 3.175 H49 YAL 48 YAL H48 H14 H 0 1 N N N N N N -35.633 -6.574 9.081 -2.474 -0.360 4.376 H48 YAL 49 YAL H51 H15 H 0 1 N N N N N N -37.692 -5.138 8.437 -0.062 -0.996 3.917 H51 YAL 50 YAL H50 H16 H 0 1 N N N N N N -36.712 -3.645 8.629 0.076 0.396 2.715 H50 YAL 51 YAL H52 H17 H 0 1 N N N N N N -37.921 -1.546 10.105 -4.362 -0.172 1.957 H52 YAL 52 YAL H54 H18 H 0 1 N N N N N N -39.024 -1.656 13.020 -5.093 -1.118 -0.908 H54 YAL 53 YAL H53 H19 H 0 1 N N N N N N -39.154 -0.306 11.841 -5.622 -1.838 0.675 H53 YAL 54 YAL H55 H20 H 0 1 N N N N N N -40.664 -1.574 10.370 -6.944 0.147 1.239 H55 YAL 55 YAL H57 H21 H 0 1 N N N N N N -39.325 -3.535 9.752 -5.285 1.948 1.140 H57 YAL 56 YAL H56 H22 H 0 1 N N N N N N -39.153 -4.066 11.459 -4.856 1.549 -0.580 H56 YAL 57 YAL H58 H23 H 0 1 N N N N N N -41.705 -3.712 11.513 -6.646 0.779 -1.749 H58 YAL 58 YAL H59 H24 H 0 1 N N N N N N -40.978 -3.067 13.023 -7.757 -0.492 -1.185 H59 YAL 59 YAL H62 H25 H 0 1 N N N N N N -43.195 0.165 12.449 -7.001 3.151 -1.049 H62 YAL 60 YAL H61 H26 H 0 1 N N N N N N -41.571 -0.231 13.105 -8.366 3.569 0.015 H61 YAL 61 YAL H60 H27 H 0 1 N N N N N N -41.824 -0.139 11.329 -6.986 2.648 0.659 H60 YAL 62 YAL H63 H28 H 0 1 N N N N N N -43.465 -3.363 13.654 -9.695 0.801 -2.089 H63 YAL 63 YAL H65 H29 H 0 1 N N N N N N -42.448 -2.095 14.419 -9.948 2.490 -1.590 H65 YAL 64 YAL H64 H30 H 0 1 N N N N N N -44.103 -1.695 13.846 -8.583 2.071 -2.654 H64 YAL 65 YAL H66 H31 H 0 1 N N N N N N -42.438 -6.967 16.446 9.681 -0.439 0.144 H66 YAL 66 YAL H68 H32 H 0 1 N N N N N N -42.875 -5.927 15.049 9.897 1.239 0.697 H68 YAL 67 YAL H67 H33 H 0 1 N N N N N N -42.626 -7.690 14.813 9.465 -0.034 1.864 H67 YAL 68 YAL H69 H34 H 0 1 N N N N N N -43.956 -3.245 11.170 -8.546 0.865 1.451 H69 YAL 69 YAL H71 H35 H 0 1 N N N N N N -44.605 -1.589 11.425 -9.926 1.786 0.807 H71 YAL 70 YAL H70 H36 H 0 1 N N N N N N -43.317 -1.871 10.205 -9.673 0.096 0.308 H70 YAL 71 YAL H1 H37 H 0 1 N N N N N N -29.140 -3.824 10.074 0.660 -6.188 -1.513 H1 YAL 72 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YAL O33 C32 DOUB N N 1 YAL C13 C32 SING N N 2 YAL C12 C13 SING N N 3 YAL C32 O34 SING N N 4 YAL C5 C12 SING N N 5 YAL C4 C5 SING N N 6 YAL C31 C4 SING N N 7 YAL C14 C5 SING N N 8 YAL O3 C31 DOUB N N 9 YAL N2 C31 SING N N 10 YAL C14 N15 DOUB Y N 11 YAL C18 C14 SING Y N 12 YAL N15 O16 SING Y N 13 YAL C6 N2 SING N N 14 YAL C19 C18 SING N N 15 YAL C17 C18 DOUB Y N 16 YAL O16 C17 SING Y N 17 YAL C19 C20 SING N N 18 YAL C21 C19 SING N N 19 YAL CL1 C11 SING N N 20 YAL C6 C7 DOUB Y N 21 YAL C11 C6 SING Y N 22 YAL C22 C17 SING N N 23 YAL C7 C8 SING Y N 24 YAL C10 C11 DOUB Y N 25 YAL C20 C21 SING N N 26 YAL C22 C23 SING N N 27 YAL C25 C22 SING N N 28 YAL C8 C9 DOUB Y N 29 YAL C9 C10 SING Y N 30 YAL C23 C24 SING N N 31 YAL C30 C9 SING N N 32 YAL C24 C25 SING N N 33 YAL C26 C24 SING N N 34 YAL C28 C27 SING N N 35 YAL C27 C26 SING N N 36 YAL C29 C27 SING N N 37 YAL C35 C27 SING N N 38 YAL C4 H37 SING N N 39 YAL C4 H38 SING N N 40 YAL C5 H39 SING N N 41 YAL N2 H36 SING N N 42 YAL C7 H40 SING N N 43 YAL C8 H41 SING N N 44 YAL C10 H42 SING N N 45 YAL C12 H44 SING N N 46 YAL C12 H43 SING N N 47 YAL C13 H45 SING N N 48 YAL C13 H46 SING N N 49 YAL C19 H47 SING N N 50 YAL C20 H49 SING N N 51 YAL C20 H48 SING N N 52 YAL C21 H51 SING N N 53 YAL C21 H50 SING N N 54 YAL C22 H52 SING N N 55 YAL C23 H54 SING N N 56 YAL C23 H53 SING N N 57 YAL C24 H55 SING N N 58 YAL C25 H57 SING N N 59 YAL C25 H56 SING N N 60 YAL C26 H58 SING N N 61 YAL C26 H59 SING N N 62 YAL C28 H62 SING N N 63 YAL C28 H61 SING N N 64 YAL C28 H60 SING N N 65 YAL C29 H63 SING N N 66 YAL C29 H65 SING N N 67 YAL C29 H64 SING N N 68 YAL C30 H66 SING N N 69 YAL C30 H68 SING N N 70 YAL C30 H67 SING N N 71 YAL C35 H69 SING N N 72 YAL C35 H71 SING N N 73 YAL C35 H70 SING N N 74 YAL O34 H1 SING N N 75 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YAL InChI InChI 1.06 "InChI=1S/C28H37ClN2O4/c1-16-5-9-22(21(29)11-16)30-23(32)14-19(8-10-24(33)34)26-25(18-6-7-18)27(35-31-26)20-12-17(13-20)15-28(2,3)4/h5,9,11,17-20H,6-8,10,12-15H2,1-4H3,(H,30,32)(H,33,34)/t17-,19-,20+/m0/s1" YAL InChIKey InChI 1.06 YWTJAGLMNTUIMB-YSIASYRMSA-N YAL SMILES_CANONICAL CACTVS 3.385 "Cc1ccc(NC(=O)C[C@H](CCC(O)=O)c2noc([C@@H]3C[C@H](C3)CC(C)(C)C)c2C4CC4)c(Cl)c1" YAL SMILES CACTVS 3.385 "Cc1ccc(NC(=O)C[CH](CCC(O)=O)c2noc([CH]3C[CH](C3)CC(C)(C)C)c2C4CC4)c(Cl)c1" YAL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(c(c1)Cl)NC(=O)C[C@H](CCC(=O)O)c2c(c(on2)C3CC(C3)CC(C)(C)C)C4CC4" YAL SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc(c(c1)Cl)NC(=O)CC(CCC(=O)O)c2c(c(on2)C3CC(C3)CC(C)(C)C)C4CC4" # _pdbx_chem_comp_identifier.comp_id YAL _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(4~{S})-6-[(2-chloranyl-4-methyl-phenyl)amino]-4-[4-cyclopropyl-5-[3-(2,2-dimethylpropyl)cyclobutyl]-1,2-oxazol-3-yl]-6-oxidanylidene-hexanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YAL "Create component" 2023-11-28 PDBJ YAL "Initial release" 2024-11-27 RCSB #