data_YAO # _chem_comp.id YAO _chem_comp.name "[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4S)-5-[(1R,3S,3aS,13R)-3-(3-benzamidophenyl)-1-hydroxy-10,11-dimethyl-4,6-dioxo-2,3,5,6-tetrahydro-1H-benzo[g]pyrrolo[2,1-e]pteridin-8(4H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate (non-preferred name)" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C43 H48 N10 O17 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-01-20 _chem_comp.pdbx_modified_date 2024-08-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 1038.846 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YAO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8FSK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YAO C4 C1 C 0 1 Y N N N N N -6.847 60.355 83.213 5.529 0.376 2.134 C4 YAO 1 YAO C14 C2 C 0 1 Y N N N N N -6.761 53.497 85.218 7.944 -1.325 0.811 C14 YAO 2 YAO C5 C3 C 0 1 Y N N N N N -7.264 59.700 82.104 6.143 1.467 2.741 C5 YAO 3 YAO C6 C4 C 0 1 Y N N N N N -7.210 60.275 80.863 6.857 1.280 3.920 C6 YAO 4 YAO C11 C5 C 0 1 N N S N N N -7.168 56.430 82.942 7.276 2.339 0.185 C11 YAO 5 YAO C7 C6 C 0 1 Y N N N N N -6.680 61.514 80.721 6.953 0.023 4.482 C7 YAO 6 YAO C8 C7 C 0 1 N N N N N N -6.575 62.161 79.381 7.728 -0.171 5.760 C8 YAO 7 YAO C9 C8 C 0 1 N N R N N N -7.414 57.669 81.087 7.398 3.408 2.386 C9 YAO 8 YAO C10 C9 C 0 1 N N N N N N -6.357 56.819 81.730 8.274 2.792 1.273 C10 YAO 9 YAO C12 C10 C 0 1 Y N N N N N -6.535 55.441 83.870 7.353 0.847 -0.012 C12 YAO 10 YAO C13 C11 C 0 1 Y N N N N N -7.315 54.430 84.376 7.878 0.045 0.985 C13 YAO 11 YAO N1 N1 N 0 1 N N N N N N -7.817 58.499 82.159 6.066 2.759 2.204 N1 YAO 12 YAO N2 N2 N 0 1 N N N N N N -3.266 54.594 85.345 6.492 -1.671 -2.548 N2 YAO 13 YAO C3 C12 C 0 1 Y N N N N N -6.308 61.615 83.093 5.633 -0.886 2.703 C3 YAO 14 YAO N3 N3 N 0 1 N N N N N N -9.534 56.821 84.750 4.579 4.284 -0.681 N3 YAO 15 YAO C1 C13 C 0 1 N N N N N N -5.628 63.554 81.697 6.448 -2.429 4.497 C1 YAO 16 YAO C15 C14 C 0 1 Y N N N N N -5.437 53.566 85.542 7.487 -1.897 -0.360 C15 YAO 17 YAO C16 C15 C 0 1 Y N N N N N -4.641 54.562 85.019 6.955 -1.095 -1.361 C16 YAO 18 YAO C17 C16 C 0 1 N N N N N N -2.626 53.788 86.204 6.635 -1.013 -3.716 C17 YAO 19 YAO C18 C17 C 0 1 Y N N N N N -1.160 53.970 86.347 6.041 -1.566 -4.952 C18 YAO 20 YAO C19 C18 C 0 1 Y N N N N N -0.459 55.033 85.820 5.328 -2.766 -4.912 C19 YAO 21 YAO C2 C19 C 0 1 Y N N N N N -6.216 62.196 81.867 6.340 -1.059 3.878 C2 YAO 22 YAO C20 C20 C 0 1 Y N N N N N 0.900 55.136 86.026 4.777 -3.276 -6.069 C20 YAO 23 YAO C21 C21 C 0 1 Y N N N N N 1.571 54.182 86.738 4.930 -2.601 -7.268 C21 YAO 24 YAO C22 C22 C 0 1 Y N N N N N 0.887 53.123 87.259 5.636 -1.412 -7.315 C22 YAO 25 YAO C23 C23 C 0 1 Y N N N N N -0.474 53.013 87.068 6.187 -0.888 -6.164 C23 YAO 26 YAO C24 C24 C 0 1 Y N N N N N -5.191 55.491 84.161 6.884 0.280 -1.181 C24 YAO 27 YAO C25 C25 C 0 1 N N S N N N -7.831 57.738 83.380 5.891 2.738 0.739 C25 YAO 28 YAO C26 C26 C 0 1 N N N N N N -9.182 57.162 83.543 5.549 4.112 0.234 C26 YAO 29 YAO C27 C27 C 0 1 N N N N N N -8.927 57.373 85.809 3.856 3.245 -1.130 C27 YAO 30 YAO C28 C28 C 0 1 N N N N N N -7.590 58.591 84.568 4.855 1.742 0.323 C28 YAO 31 YAO C29 C29 C 0 1 N N N N N N -6.337 60.379 85.625 4.023 -0.566 0.385 C29 YAO 32 YAO C30 C30 C 0 1 N N S N N N -7.188 61.353 86.356 2.600 -0.516 0.947 C30 YAO 33 YAO C31 C31 C 0 1 N N S N N N -6.391 62.234 87.302 1.781 -1.668 0.363 C31 YAO 34 YAO C32 C32 C 0 1 N N R N N N -7.249 63.065 88.221 0.358 -1.618 0.925 C32 YAO 35 YAO C33 C33 C 0 1 N N N N N N -6.491 64.251 88.753 -0.461 -2.771 0.341 C33 YAO 36 YAO C34 C34 C 0 1 N N N N N N -6.096 70.276 89.248 -8.297 -2.395 0.830 C34 YAO 37 YAO C35 C35 C 0 1 N N R N N N -6.862 71.550 89.440 -8.912 -1.122 1.414 C35 YAO 38 YAO C36 C36 C 0 1 N N R N N N -6.120 73.628 88.890 -9.521 0.982 0.661 C36 YAO 39 YAO C37 C37 C 0 1 Y N N N N N -3.902 74.108 88.174 -8.614 1.724 -1.573 C37 YAO 40 YAO C38 C38 C 0 1 Y N N N N N -3.604 76.034 88.952 -9.430 3.727 -1.739 C38 YAO 41 YAO C39 C39 C 0 1 Y N N N N N -3.198 77.293 89.367 -9.832 5.030 -2.079 C39 YAO 42 YAO C40 C40 C 0 1 Y N N N N N -5.250 77.507 90.350 -10.995 5.154 -0.090 C40 YAO 43 YAO C41 C41 C 0 1 Y N N N N N -4.849 75.641 89.308 -9.870 3.195 -0.515 C41 YAO 44 YAO C42 C42 C 0 1 N N R N N N -6.470 72.913 87.617 -10.774 0.101 0.426 C42 YAO 45 YAO C43 C43 C 0 1 N N S N N N -7.585 72.082 88.203 -10.445 -1.162 1.258 C43 YAO 46 YAO N10 N4 N 0 1 Y N N N N N -5.738 76.337 90.005 -10.644 3.938 0.271 N10 YAO 47 YAO N4 N5 N 0 1 N N N N N N -8.016 58.272 85.722 3.961 2.026 -0.589 N4 YAO 48 YAO N5 N6 N 0 1 N N N N N N -6.957 59.739 84.451 4.807 0.538 0.944 N5 YAO 49 YAO N6 N7 N 0 1 Y N N N N N -4.990 74.393 88.812 -9.340 1.932 -0.438 N6 YAO 50 YAO N7 N8 N 0 1 Y N N N N N -3.002 75.046 88.227 -8.668 2.778 -2.335 N7 YAO 51 YAO N8 N9 N 0 1 N N N N N N -2.020 77.810 89.089 -9.430 5.606 -3.272 N8 YAO 52 YAO N9 N10 N 0 1 Y N N N N N -4.057 78.018 90.087 -10.606 5.696 -1.230 N9 YAO 53 YAO O1 O1 O 0 1 N N N N N N -8.518 56.940 80.760 7.292 4.823 2.214 O1 YAO 54 YAO O10 O2 O 0 1 N N N N N N -7.447 66.750 91.192 -3.020 -3.803 -1.128 O10 YAO 55 YAO O11 O3 O 0 1 N N N N N N -5.689 66.945 89.642 -4.389 -3.196 0.904 O11 YAO 56 YAO O12 O4 O 0 1 N N N N N N -7.798 67.112 88.701 -6.300 -4.940 1.372 O12 YAO 57 YAO O13 O5 O 0 1 N N N N N N -5.851 68.246 87.621 -6.080 -3.800 -0.869 O13 YAO 58 YAO O14 O6 O 0 1 N N N N N N -6.868 69.152 89.618 -6.887 -2.396 1.067 O14 YAO 59 YAO O15 O7 O 0 1 N N N N N N -5.867 72.550 89.719 -8.439 0.026 0.691 O15 YAO 60 YAO O16 O8 O 0 1 N N N N N N -6.946 73.750 86.609 -11.950 0.745 0.920 O16 YAO 61 YAO O17 O9 O 0 1 N N N N N N -8.629 73.004 88.464 -11.079 -1.098 2.537 O17 YAO 62 YAO O2 O10 O 0 1 N N N N N N -3.194 52.965 86.898 7.251 0.034 -3.753 O2 YAO 63 YAO O3 O11 O 0 1 N N N N N N -9.877 56.928 82.596 6.154 5.075 0.655 O3 YAO 64 YAO O4 O12 O 0 1 N N N N N N -9.276 57.031 86.896 3.084 3.417 -2.054 O4 YAO 65 YAO O5 O13 O 0 1 N N N N N N -7.604 62.177 85.398 2.645 -0.636 2.370 O5 YAO 66 YAO O6 O14 O 0 1 N N N N N N -5.761 61.427 88.171 1.735 -1.548 -1.060 O6 YAO 67 YAO O7 O15 O 0 1 N N N N N N -8.329 63.476 87.413 0.403 -1.738 2.348 O7 YAO 68 YAO O8 O16 O 0 1 N N N N N N -7.141 64.929 89.813 -1.819 -2.657 0.773 O8 YAO 69 YAO O9 O17 O 0 1 N N N N N N -5.338 65.438 91.480 -2.630 -5.150 0.971 O9 YAO 70 YAO P1 P1 P 0 1 N N N N N N -6.364 65.988 90.632 -2.966 -3.704 0.348 P1 YAO 71 YAO P2 P2 P 0 1 N N N N N N -6.585 67.872 88.809 -5.918 -3.588 0.587 P2 YAO 72 YAO H1 H1 H 0 1 N N N N N N -7.375 52.707 85.625 8.358 -1.948 1.590 H1 YAO 73 YAO H2 H2 H 0 1 N N N N N N -7.588 59.744 80.002 7.338 2.122 4.398 H2 YAO 74 YAO H3 H3 H 0 1 N N N N N N -8.006 55.865 82.508 7.473 2.857 -0.753 H3 YAO 75 YAO H4 H4 H 0 1 N N N N N N -7.489 62.739 79.180 7.062 -0.040 6.613 H4 YAO 76 YAO H5 H5 H 0 1 N N N N N N -5.705 62.834 79.366 8.150 -1.176 5.780 H5 YAO 77 YAO H6 H6 H 0 1 N N N N N N -6.454 61.387 78.609 8.533 0.562 5.812 H6 YAO 78 YAO H7 H7 H 0 1 N N N N N N -7.003 58.242 80.243 7.806 3.172 3.369 H7 YAO 79 YAO H8 H8 H 0 1 N N N N N N -6.077 55.953 81.112 8.828 1.936 1.658 H8 YAO 80 YAO H9 H9 H 0 1 N N N N N N -5.454 57.391 81.991 8.959 3.539 0.872 H9 YAO 81 YAO H10 H10 H 0 1 N N N N N N -8.361 54.369 84.113 8.235 0.490 1.902 H10 YAO 82 YAO H11 H11 H 0 1 N N N N N N -2.713 55.290 84.887 6.069 -2.543 -2.531 H11 YAO 83 YAO H12 H12 H 0 1 N N N N N N -5.959 62.141 83.969 5.158 -1.732 2.229 H12 YAO 84 YAO H13 H13 H 0 1 N N N N N N -10.259 56.146 84.886 4.397 5.174 -1.021 H13 YAO 85 YAO H14 H14 H 0 1 N N N N N N -6.421 64.311 81.784 5.621 -2.581 5.190 H14 YAO 86 YAO H15 H15 H 0 1 N N N N N N -4.870 63.725 82.476 6.409 -3.186 3.713 H15 YAO 87 YAO H16 H16 H 0 1 N N N N N N -5.158 63.628 80.705 7.393 -2.511 5.034 H16 YAO 88 YAO H17 H17 H 0 1 N N N N N N -5.010 52.835 86.213 7.544 -2.967 -0.497 H17 YAO 89 YAO H18 H18 H 0 1 N N N N N N -0.975 55.787 85.244 5.209 -3.293 -3.978 H18 YAO 90 YAO H19 H19 H 0 1 N N N N N N 1.440 55.979 85.621 4.226 -4.204 -6.040 H19 YAO 91 YAO H20 H20 H 0 1 N N N N N N 2.637 54.266 86.887 4.497 -3.005 -8.171 H20 YAO 92 YAO H21 H21 H 0 1 N N N N N N 1.414 52.368 87.823 5.752 -0.891 -8.253 H21 YAO 93 YAO H22 H22 H 0 1 N N N N N N -1.008 52.172 87.486 6.733 0.043 -6.201 H22 YAO 94 YAO H23 H23 H 0 1 N N N N N N -4.569 56.255 83.719 6.475 0.907 -1.959 H23 YAO 95 YAO H25 H25 H 0 1 N N N N N N -6.051 59.585 86.330 4.486 -1.515 0.655 H25 YAO 96 YAO H26 H26 H 0 1 N N N N N N -5.435 60.908 85.284 3.988 -0.474 -0.700 H26 YAO 97 YAO H27 H27 H 0 1 N N N N N N -8.004 60.845 86.891 2.136 0.433 0.677 H27 YAO 98 YAO H28 H28 H 0 1 N N N N N N -5.702 62.877 86.734 2.244 -2.617 0.633 H28 YAO 99 YAO H29 H29 H 0 1 N N N N N N -7.599 62.445 89.059 -0.106 -0.669 0.655 H29 YAO 100 YAO H30 H30 H 0 1 N N N N N N -5.513 63.901 89.116 -0.422 -2.730 -0.748 H30 YAO 101 YAO H31 H31 H 0 1 N N N N N N -6.342 64.963 87.928 -0.049 -3.720 0.684 H31 YAO 102 YAO H32 H32 H 0 1 N N N N N N -5.814 70.184 88.189 -8.746 -3.267 1.305 H32 YAO 103 YAO H33 H33 H 0 1 N N N N N N -5.188 70.307 89.868 -8.484 -2.430 -0.244 H33 YAO 104 YAO H34 H34 H 0 1 N N N N N N -7.571 71.448 90.275 -8.646 -1.032 2.467 H34 YAO 105 YAO H35 H35 H 0 1 N N N N N N -6.985 74.211 89.239 -9.594 1.507 1.613 H35 YAO 106 YAO H36 H36 H 0 1 N N N N N N -3.754 73.178 87.646 -8.071 0.820 -1.804 H36 YAO 107 YAO H37 H37 H 0 1 N N N N N N -5.911 78.137 90.926 -11.625 5.730 0.572 H37 YAO 108 YAO H38 H38 H 0 1 N N N N N N -5.639 72.275 87.282 -10.883 -0.146 -0.630 H38 YAO 109 YAO H39 H39 H 0 1 N N N N N N -7.884 71.266 87.529 -10.751 -2.061 0.724 H39 YAO 110 YAO H41 H41 H 0 1 N N N N N N -1.954 78.724 89.489 -8.864 5.109 -3.884 H41 YAO 111 YAO H42 H42 H 0 1 N N N N N N -1.302 77.227 89.470 -9.714 6.506 -3.496 H42 YAO 112 YAO H43 H43 H 0 1 N N N N N N -9.111 56.912 81.502 8.138 5.289 2.263 H43 YAO 113 YAO H44 H44 H 0 1 N N N N N N -7.981 66.936 87.786 -6.216 -4.874 2.333 H44 YAO 114 YAO H45 H45 H 0 1 N N N N N N -6.228 74.262 86.256 -12.746 0.198 0.877 H45 YAO 115 YAO H46 H46 H 0 1 N N N N N N -9.372 72.545 88.838 -12.045 -1.061 2.496 H46 YAO 116 YAO H47 H47 H 0 1 N N N N N N -8.164 62.845 85.776 3.047 -1.459 2.683 H47 YAO 117 YAO H48 H48 H 0 1 N N N N N N -5.252 61.951 88.778 1.334 -0.725 -1.373 H48 YAO 118 YAO H49 H49 H 0 1 N N N N N N -8.923 64.011 87.926 0.804 -2.561 2.660 H49 YAO 119 YAO H50 H50 H 0 1 N N N N N N -5.518 65.666 92.384 -2.579 -5.159 1.936 H50 YAO 120 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YAO C8 C7 SING N N 1 YAO C7 C6 DOUB Y N 2 YAO C7 C2 SING Y N 3 YAO O1 C9 SING N N 4 YAO C6 C5 SING Y N 5 YAO C9 C10 SING N N 6 YAO C9 N1 SING N N 7 YAO C1 C2 SING N N 8 YAO C10 C11 SING N N 9 YAO C2 C3 DOUB Y N 10 YAO C5 N1 SING N N 11 YAO C5 C4 DOUB Y N 12 YAO N1 C25 SING N N 13 YAO O3 C26 DOUB N N 14 YAO C11 C25 SING N N 15 YAO C11 C12 SING N N 16 YAO C3 C4 SING Y N 17 YAO C4 N5 SING N N 18 YAO C25 C26 SING N N 19 YAO C25 C28 SING N N 20 YAO C26 N3 SING N N 21 YAO C12 C24 DOUB Y N 22 YAO C12 C13 SING Y N 23 YAO C24 C16 SING Y N 24 YAO C13 C14 DOUB Y N 25 YAO N5 C28 SING N N 26 YAO N5 C29 SING N N 27 YAO C28 N4 DOUB N N 28 YAO N3 C27 SING N N 29 YAO C16 N2 SING N N 30 YAO C16 C15 DOUB Y N 31 YAO C14 C15 SING Y N 32 YAO N2 C17 SING N N 33 YAO O5 C30 SING N N 34 YAO C29 C30 SING N N 35 YAO N4 C27 SING N N 36 YAO C27 O4 DOUB N N 37 YAO C19 C20 DOUB Y N 38 YAO C19 C18 SING Y N 39 YAO C20 C21 SING Y N 40 YAO C17 C18 SING N N 41 YAO C17 O2 DOUB N N 42 YAO C18 C23 DOUB Y N 43 YAO C30 C31 SING N N 44 YAO O16 C42 SING N N 45 YAO C21 C22 DOUB Y N 46 YAO C23 C22 SING Y N 47 YAO C31 O6 SING N N 48 YAO C31 C32 SING N N 49 YAO O7 C32 SING N N 50 YAO C42 C43 SING N N 51 YAO C42 C36 SING N N 52 YAO O13 P2 DOUB N N 53 YAO C37 N7 DOUB Y N 54 YAO C37 N6 SING Y N 55 YAO C43 O17 SING N N 56 YAO C43 C35 SING N N 57 YAO C32 C33 SING N N 58 YAO N7 C38 SING Y N 59 YAO O12 P2 SING N N 60 YAO C33 O8 SING N N 61 YAO P2 O14 SING N N 62 YAO P2 O11 SING N N 63 YAO N6 C36 SING N N 64 YAO N6 C41 SING Y N 65 YAO C36 O15 SING N N 66 YAO C38 C41 DOUB Y N 67 YAO C38 C39 SING Y N 68 YAO N8 C39 SING N N 69 YAO C34 C35 SING N N 70 YAO C34 O14 SING N N 71 YAO C41 N10 SING Y N 72 YAO C39 N9 DOUB Y N 73 YAO C35 O15 SING N N 74 YAO O11 P1 SING N N 75 YAO O8 P1 SING N N 76 YAO N10 C40 DOUB Y N 77 YAO N9 C40 SING Y N 78 YAO P1 O10 DOUB N N 79 YAO P1 O9 SING N N 80 YAO C14 H1 SING N N 81 YAO C6 H2 SING N N 82 YAO C11 H3 SING N N 83 YAO C8 H4 SING N N 84 YAO C8 H5 SING N N 85 YAO C8 H6 SING N N 86 YAO C9 H7 SING N N 87 YAO C10 H8 SING N N 88 YAO C10 H9 SING N N 89 YAO C13 H10 SING N N 90 YAO N2 H11 SING N N 91 YAO C3 H12 SING N N 92 YAO N3 H13 SING N N 93 YAO C1 H14 SING N N 94 YAO C1 H15 SING N N 95 YAO C1 H16 SING N N 96 YAO C15 H17 SING N N 97 YAO C19 H18 SING N N 98 YAO C20 H19 SING N N 99 YAO C21 H20 SING N N 100 YAO C22 H21 SING N N 101 YAO C23 H22 SING N N 102 YAO C24 H23 SING N N 103 YAO C29 H25 SING N N 104 YAO C29 H26 SING N N 105 YAO C30 H27 SING N N 106 YAO C31 H28 SING N N 107 YAO C32 H29 SING N N 108 YAO C33 H30 SING N N 109 YAO C33 H31 SING N N 110 YAO C34 H32 SING N N 111 YAO C34 H33 SING N N 112 YAO C35 H34 SING N N 113 YAO C36 H35 SING N N 114 YAO C37 H36 SING N N 115 YAO C40 H37 SING N N 116 YAO C42 H38 SING N N 117 YAO C43 H39 SING N N 118 YAO N8 H41 SING N N 119 YAO N8 H42 SING N N 120 YAO O1 H43 SING N N 121 YAO O12 H44 SING N N 122 YAO O16 H45 SING N N 123 YAO O17 H46 SING N N 124 YAO O5 H47 SING N N 125 YAO O6 H48 SING N N 126 YAO O7 H49 SING N N 127 YAO O9 H50 SING N N 128 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YAO SMILES ACDLabs 12.01 "O=C(Nc1cccc(c1)C1CC(O)N2c3cc(C)c(C)cc3N(CC(O)C(O)C(O)COP(=O)(O)OP(=O)(O)OCC3OC(n4cnc5c(N)ncnc54)C(O)C3O)C3=NC(=O)NC(=O)C123)c1ccccc1" YAO InChI InChI 1.06 "InChI=1S/C43H48N10O17P2/c1-20-11-26-27(12-21(20)2)53-31(56)14-25(23-9-6-10-24(13-23)48-38(60)22-7-4-3-5-8-22)43(53)40(49-42(62)50-41(43)61)51(26)15-28(54)33(57)29(55)16-67-71(63,64)70-72(65,66)68-17-30-34(58)35(59)39(69-30)52-19-47-32-36(44)45-18-46-37(32)52/h3-13,18-19,25,28-31,33-35,39,54-59H,14-17H2,1-2H3,(H,48,60)(H,63,64)(H,65,66)(H2,44,45,46)(H,50,61,62)/t25-,28-,29+,30+,31+,33-,34+,35+,39+,43-/m0/s1" YAO InChIKey InChI 1.06 TVSQFEAYGQYMKN-MSBGJGFBSA-N YAO SMILES_CANONICAL CACTVS 3.385 "Cc1cc2N(C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(=O)O[P](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)C6=NC(=O)NC(=O)[C@]67[C@@H](C[C@@H](O)N7c2cc1C)c8cccc(NC(=O)c9ccccc9)c8" YAO SMILES CACTVS 3.385 "Cc1cc2N(C[CH](O)[CH](O)[CH](O)CO[P](O)(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)C6=NC(=O)NC(=O)[C]67[CH](C[CH](O)N7c2cc1C)c8cccc(NC(=O)c9ccccc9)c8" YAO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc2c(cc1C)N3[C@@H](C[C@H]([C@]34C(=O)NC(=O)N=C4N2C[C@@H]([C@@H]([C@@H](COP(=O)(O)OP(=O)(O)OC[C@@H]5[C@H]([C@H]([C@@H](O5)n6cnc7c6ncnc7N)O)O)O)O)O)c8cccc(c8)NC(=O)c9ccccc9)O" YAO SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc2c(cc1C)N3C(CC(C34C(=O)NC(=O)N=C4N2CC(C(C(COP(=O)(O)OP(=O)(O)OCC5C(C(C(O5)n6cnc7c6ncnc7N)O)O)O)O)O)c8cccc(c8)NC(=O)c9ccccc9)O" # _pdbx_chem_comp_identifier.comp_id YAO _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4S)-5-[(1R,3S,3aS,13R)-3-(3-benzamidophenyl)-1-hydroxy-10,11-dimethyl-4,6-dioxo-2,3,5,6-tetrahydro-1H-benzo[g]pyrrolo[2,1-e]pteridin-8(4H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate (non-preferred name)" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YAO "Create component" 2023-01-20 RCSB YAO "Initial release" 2024-08-07 RCSB #