data_YAQ # _chem_comp.id YAQ _chem_comp.name "(4S)-2-(4-chlorophenyl)-7-methyl-8-pentylimidazo[1,2-a]pyrimidin-5(8H)-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H20 Cl N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-12 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 329.824 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YAQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G7A _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YAQ C11 C1 C 0 1 Y N N N N N 12.415 3.023 -43.651 4.685 0.611 0.344 C11 YAQ 1 YAQ C16 C2 C 0 1 N N N N N N 13.719 9.757 -48.235 -3.463 1.627 -0.312 C16 YAQ 2 YAQ C17 C3 C 0 1 N N N N N N 13.349 10.996 -49.048 -4.925 1.363 -0.566 C17 YAQ 3 YAQ C18 C4 C 0 1 N N N N N N 14.910 9.112 -48.510 -3.061 2.847 0.110 C18 YAQ 4 YAQ C19 C5 C 0 1 N N N N N N 11.513 9.944 -46.830 -2.990 -0.686 -0.960 C19 YAQ 5 YAQ C20 C6 C 0 1 N N N N N N 11.655 10.519 -45.364 -3.301 -1.568 0.252 C20 YAQ 6 YAQ C21 C7 C 0 1 N N N N N N 10.241 10.514 -44.684 -3.762 -2.947 -0.226 C21 YAQ 7 YAQ C22 C8 C 0 1 N N N N N N 10.332 10.210 -43.191 -4.072 -3.829 0.985 C22 YAQ 8 YAQ C23 C9 C 0 1 N N N N N N 10.916 8.854 -42.897 -4.533 -5.207 0.507 C23 YAQ 9 YAQ O1 O1 O 0 1 N N N N N N 16.295 7.217 -48.116 -1.320 4.184 0.727 O1 YAQ 10 YAQ C2 C10 C 0 1 N N N N N N 15.263 7.842 -47.915 -1.691 3.088 0.346 C2 YAQ 11 YAQ N3 N1 N 0 1 Y N N N N N 14.254 7.307 -46.992 -0.796 2.101 0.150 N3 YAQ 12 YAQ C4 C11 C 0 1 Y N N N N N 14.182 6.084 -46.259 0.569 2.048 0.296 C4 YAQ 13 YAQ C5 C12 C 0 1 Y N N N N N 12.998 6.165 -45.501 0.950 0.791 -0.044 C5 YAQ 14 YAQ C6 C13 C 0 1 Y N N N N N 12.416 5.202 -44.610 2.339 0.271 -0.038 C6 YAQ 15 YAQ C7 C14 C 0 1 Y N N N N N 11.267 5.542 -43.858 2.594 -1.048 -0.412 C7 YAQ 16 YAQ C8 C15 C 0 1 Y N N N N N 10.696 4.608 -42.975 3.887 -1.529 -0.395 C8 YAQ 17 YAQ C9 C16 C 0 1 Y N N N N N 11.288 3.382 -42.892 4.932 -0.701 -0.023 C9 YAQ 18 YAQ CL10 CL1 CL 0 0 N N N N N N 10.630 2.233 -41.756 6.558 -1.309 -0.017 CL10 YAQ 19 YAQ C12 C17 C 0 1 Y N N N N N 12.982 3.938 -44.521 3.394 1.099 0.341 C12 YAQ 20 YAQ N13 N2 N 0 1 Y N N N N N 12.320 7.353 -45.739 -0.154 0.095 -0.388 N13 YAQ 21 YAQ C14 C18 C 0 1 Y N N N N N 13.077 8.014 -46.661 -1.209 0.870 -0.276 C14 YAQ 22 YAQ N15 N3 N 0 1 N N N N N N 12.797 9.253 -47.284 -2.549 0.634 -0.502 N15 YAQ 23 YAQ H27 H1 H 0 1 N N N N N N 12.838 2.034 -43.555 5.503 1.252 0.638 H27 YAQ 24 YAQ H29 H2 H 0 1 N N N N N N 14.173 11.246 -49.732 -5.499 2.266 -0.357 H29 YAQ 25 YAQ H31 H3 H 0 1 N N N N N N 12.438 10.794 -49.630 -5.067 1.075 -1.607 H31 YAQ 26 YAQ H30 H4 H 0 1 N N N N N N 13.169 11.841 -48.367 -5.267 0.557 0.083 H30 YAQ 27 YAQ H32 H5 H 0 1 N N N N N N 15.604 9.574 -49.196 -3.784 3.633 0.264 H32 YAQ 28 YAQ H33 H6 H 0 1 N N N N N N 11.289 10.772 -47.519 -2.201 -1.148 -1.552 H33 YAQ 29 YAQ H34 H7 H 0 1 N N N N N N 10.688 9.216 -46.851 -3.887 -0.578 -1.570 H34 YAQ 30 YAQ H36 H8 H 0 1 N N N N N N 12.347 9.890 -44.785 -2.404 -1.676 0.862 H36 YAQ 31 YAQ H35 H9 H 0 1 N N N N N N 12.042 11.548 -45.406 -4.090 -1.107 0.845 H35 YAQ 32 YAQ H37 H10 H 0 1 N N N N N N 9.777 11.502 -44.819 -4.659 -2.839 -0.836 H37 YAQ 33 YAQ H38 H11 H 0 1 N N N N N N 9.617 9.747 -45.166 -2.972 -3.408 -0.819 H38 YAQ 34 YAQ H39 H12 H 0 1 N N N N N N 10.965 10.974 -42.717 -3.175 -3.937 1.595 H39 YAQ 35 YAQ H40 H13 H 0 1 N N N N N N 9.320 10.255 -42.763 -4.862 -3.367 1.578 H40 YAQ 36 YAQ H42 H14 H 0 1 N N N N N N 10.953 8.698 -41.809 -5.430 -5.099 -0.103 H42 YAQ 37 YAQ H41 H15 H 0 1 N N N N N N 10.288 8.077 -43.357 -3.744 -5.669 -0.086 H41 YAQ 38 YAQ H43 H16 H 0 1 N N N N N N 11.933 8.796 -43.311 -4.754 -5.835 1.370 H43 YAQ 39 YAQ H24 H17 H 0 1 N N N N N N 14.888 5.267 -46.281 1.214 2.851 0.619 H24 YAQ 40 YAQ H25 H18 H 0 1 N N N N N N 10.827 6.523 -43.962 1.780 -1.693 -0.706 H25 YAQ 41 YAQ H26 H19 H 0 1 N N N N N N 9.824 4.852 -42.386 4.086 -2.551 -0.684 H26 YAQ 42 YAQ H28 H20 H 0 1 N N N N N N 13.844 3.675 -45.116 3.202 2.121 0.632 H28 YAQ 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YAQ O1 C2 DOUB N N 1 YAQ C2 N3 SING N N 2 YAQ C2 C18 SING N N 3 YAQ N3 C4 SING Y N 4 YAQ N3 C14 SING Y N 5 YAQ C4 C5 DOUB Y N 6 YAQ C5 C6 SING N N 7 YAQ C5 N13 SING Y N 8 YAQ C6 C7 DOUB Y N 9 YAQ C6 C12 SING Y N 10 YAQ C7 C8 SING Y N 11 YAQ C8 C9 DOUB Y N 12 YAQ C9 CL10 SING N N 13 YAQ C9 C11 SING Y N 14 YAQ C11 C12 DOUB Y N 15 YAQ N13 C14 DOUB Y N 16 YAQ C14 N15 SING N N 17 YAQ N15 C16 SING N N 18 YAQ N15 C19 SING N N 19 YAQ C16 C17 SING N N 20 YAQ C16 C18 DOUB N N 21 YAQ C19 C20 SING N N 22 YAQ C20 C21 SING N N 23 YAQ C21 C22 SING N N 24 YAQ C22 C23 SING N N 25 YAQ C11 H27 SING N N 26 YAQ C17 H29 SING N N 27 YAQ C17 H31 SING N N 28 YAQ C17 H30 SING N N 29 YAQ C18 H32 SING N N 30 YAQ C19 H33 SING N N 31 YAQ C19 H34 SING N N 32 YAQ C20 H36 SING N N 33 YAQ C20 H35 SING N N 34 YAQ C21 H37 SING N N 35 YAQ C21 H38 SING N N 36 YAQ C22 H39 SING N N 37 YAQ C22 H40 SING N N 38 YAQ C23 H42 SING N N 39 YAQ C23 H41 SING N N 40 YAQ C23 H43 SING N N 41 YAQ C4 H24 SING N N 42 YAQ C7 H25 SING N N 43 YAQ C8 H26 SING N N 44 YAQ C12 H28 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YAQ SMILES ACDLabs 12.01 "Clc1ccc(cc1)c1cn2c(n1)N(CCCCC)C(C)=CC2=O" YAQ InChI InChI 1.06 "InChI=1S/C18H20ClN3O/c1-3-4-5-10-21-13(2)11-17(23)22-12-16(20-18(21)22)14-6-8-15(19)9-7-14/h6-9,11-12H,3-5,10H2,1-2H3" YAQ InChIKey InChI 1.06 SJBGJXBZVGMLLE-UHFFFAOYSA-N YAQ SMILES_CANONICAL CACTVS 3.385 "CCCCCN1C(=CC(=O)n2cc(nc12)c3ccc(Cl)cc3)C" YAQ SMILES CACTVS 3.385 "CCCCCN1C(=CC(=O)n2cc(nc12)c3ccc(Cl)cc3)C" YAQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCN1c2nc(cn2C(=O)C=C1C)c3ccc(cc3)Cl" YAQ SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCN1c2nc(cn2C(=O)C=C1C)c3ccc(cc3)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YAQ "SYSTEMATIC NAME" ACDLabs 12.01 "(4S)-2-(4-chlorophenyl)-7-methyl-8-pentylimidazo[1,2-a]pyrimidin-5(8H)-one" YAQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-(4-chlorophenyl)-7-methyl-8-pentyl-imidazo[1,2-a]pyrimidin-5-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YAQ "Create component" 2023-06-12 RCSB YAQ "Initial release" 2024-12-18 RCSB #