data_YAV # _chem_comp.id YAV _chem_comp.name "2-[2-[2-[3-[2-[2-[2-[[3-[2-[3-(2-hydroxy-2-oxoethyl)-5-methyl-1-benzofuran-2-yl]ethynyl]phenyl]carbonylamino]ethoxy]ethoxy]ethylcarbamoyl]phenyl]ethynyl]-5-methyl-1-benzofuran-3-yl]ethanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C46 H40 N2 O10" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-02-15 _chem_comp.pdbx_modified_date 2022-02-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 780.817 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YAV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7LQP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YAV C10 C1 C 0 1 N N N 0.708 16.473 -5.841 -11.859 -0.804 1.557 C10 YAV 1 YAV C15 C2 C 0 1 Y N N 2.752 14.066 -4.622 -13.167 -3.774 0.731 C15 YAV 2 YAV C17 C3 C 0 1 N N N 3.656 12.232 -3.125 -14.759 -5.685 0.692 C17 YAV 3 YAV C20 C4 C 0 1 Y N N 3.948 14.799 -6.588 -11.130 -3.798 -0.592 C20 YAV 4 YAV C22 C5 C 0 1 Y N N 0.542 20.285 -9.980 -7.757 2.325 0.676 C22 YAV 5 YAV C24 C6 C 0 1 Y N N 0.880 21.102 -12.215 -5.709 3.289 -0.106 C24 YAV 6 YAV C26 C7 C 0 1 N N N 3.222 20.906 -15.985 -2.152 3.023 -2.539 C26 YAV 7 YAV C02 C8 C 0 1 N N N 2.573 19.983 -13.752 -4.244 2.080 -1.719 C02 YAV 8 YAV C03 C9 C 0 1 Y N N 1.832 20.116 -12.427 -5.466 2.158 -0.890 C03 YAV 9 YAV C04 C10 C 0 1 Y N N 2.135 19.222 -11.426 -6.380 1.107 -0.894 C04 YAV 10 YAV C05 C11 C 0 1 Y N N 1.495 19.307 -10.210 -7.530 1.189 -0.108 C05 YAV 11 YAV C06 C12 C 0 1 N N N 1.891 18.285 -9.155 -8.475 0.113 -0.105 C06 YAV 12 YAV C07 C13 C 0 1 N N N 2.246 17.451 -8.400 -9.250 -0.769 -0.102 C07 YAV 13 YAV C08 C14 C 0 1 Y N N 2.726 16.356 -7.460 -10.195 -1.845 -0.098 C08 YAV 14 YAV C09 C15 C 0 1 Y N N 2.044 15.946 -6.325 -11.347 -1.873 0.626 C09 YAV 15 YAV C11 C16 C 0 1 N N N -0.299 15.384 -6.144 -12.724 0.160 0.787 C11 YAV 16 YAV C14 C17 C 0 1 Y N N 2.853 14.894 -5.745 -11.986 -3.153 0.320 C14 YAV 17 YAV C16 C18 C 0 1 Y N N 3.758 13.143 -4.352 -13.488 -5.010 0.244 C16 YAV 18 YAV C18 C19 C 0 1 Y N N 4.862 13.046 -5.200 -12.650 -5.648 -0.659 C18 YAV 19 YAV C19 C20 C 0 1 Y N N 4.959 13.870 -6.314 -11.482 -5.049 -1.081 C19 YAV 20 YAV C23 C21 C 0 1 Y N N 0.236 21.187 -10.988 -6.849 3.364 0.669 C23 YAV 21 YAV C27 C22 C 0 1 N N N 2.696 21.928 -16.990 -1.330 4.300 -2.356 C27 YAV 22 YAV C29 C23 C 0 1 N N N 4.656 23.107 -17.487 -0.084 5.543 -0.729 C29 YAV 23 YAV C30 C24 C 0 1 N N N 5.402 23.625 -18.710 0.354 5.524 0.737 C30 YAV 24 YAV C32 C25 C 0 1 N N N 4.292 25.485 -19.527 1.701 4.308 2.302 C32 YAV 25 YAV C33 C26 C 0 1 N N N 3.681 26.063 -20.806 2.626 3.094 2.422 C33 YAV 26 YAV C35 C27 C 0 1 N N N 3.195 25.511 -23.202 4.786 2.369 1.560 C35 YAV 27 YAV C36 C28 C 0 1 Y N N 2.849 24.532 -24.325 5.996 2.589 0.739 C36 YAV 28 YAV C37 C29 C 0 1 Y N N 1.521 24.185 -24.520 6.144 3.773 0.013 C37 YAV 29 YAV C38 C30 C 0 1 Y N N 1.169 23.306 -25.529 7.273 3.982 -0.755 C38 YAV 30 YAV C39 C31 C 0 1 Y N N 2.148 22.776 -26.351 8.264 3.023 -0.811 C39 YAV 31 YAV C40 C32 C 0 1 Y N N 3.474 23.122 -26.161 8.130 1.832 -0.089 C40 YAV 32 YAV C41 C33 C 0 1 N N N 4.528 22.510 -27.084 9.159 0.837 -0.147 C41 YAV 33 YAV C42 C34 C 0 1 N N N 5.305 22.026 -27.841 10.002 0.022 -0.195 C42 YAV 34 YAV C43 C35 C 0 1 Y N N 6.301 21.523 -28.886 11.031 -0.972 -0.254 C43 YAV 35 YAV C44 C36 C 0 1 Y N N 6.851 22.356 -29.858 11.008 -2.163 0.404 C44 YAV 36 YAV C45 C37 C 0 1 N N N 6.567 23.843 -30.028 9.919 -2.675 1.312 C45 YAV 37 YAV C46 C38 C 0 1 N N N 6.267 24.224 -31.472 8.911 -3.448 0.502 C46 YAV 38 YAV C49 C39 C 0 1 Y N N 7.733 21.513 -30.638 12.253 -2.845 0.051 C49 YAV 39 YAV C50 C40 C 0 1 Y N N 8.573 21.715 -31.737 12.820 -4.074 0.394 C50 YAV 40 YAV C51 C41 C 0 1 Y N N 9.306 20.653 -32.255 14.039 -4.424 -0.116 C51 YAV 41 YAV C52 C42 C 0 1 N N N 10.226 20.873 -33.457 14.653 -5.750 0.252 C52 YAV 42 YAV C53 C43 C 0 1 Y N N 9.201 19.388 -31.675 14.714 -3.566 -0.972 C53 YAV 43 YAV C54 C44 C 0 1 Y N N 8.366 19.185 -30.584 14.171 -2.348 -1.323 C54 YAV 44 YAV C55 C45 C 0 1 Y N N 7.626 20.255 -30.059 12.934 -1.971 -0.817 C55 YAV 45 YAV C57 C46 C 0 1 Y N N 3.830 24.004 -25.152 6.994 1.618 0.692 C57 YAV 46 YAV N25 N1 N 0 1 N N N 2.507 21.045 -14.732 -3.363 3.100 -1.718 N25 YAV 47 YAV N34 N2 N 0 1 N N N 3.373 25.065 -21.822 3.824 3.312 1.608 N34 YAV 48 YAV O01 O1 O 0 1 N N N 3.211 19.011 -13.972 -4.034 1.097 -2.401 O01 YAV 49 YAV O12 O2 O 0 1 N N N -0.262 14.335 -5.455 -13.293 1.201 1.415 O12 YAV 50 YAV O13 O3 O 0 1 N N N -1.140 15.517 -7.069 -12.907 -0.005 -0.396 O13 YAV 51 YAV O21 O4 O 0 1 Y N N 3.826 15.676 -7.576 -10.079 -2.983 -0.813 O21 YAV 52 YAV O28 O5 O 0 1 N N N 3.717 22.162 -17.919 -0.867 4.381 -1.007 O28 YAV 53 YAV O31 O6 O 0 1 N N N 4.475 24.105 -19.644 1.231 4.417 0.957 O31 YAV 54 YAV O47 O7 O 0 1 N N N 6.814 25.239 -31.978 7.847 -4.001 1.105 O47 YAV 55 YAV O48 O8 O 0 1 N N N 5.474 23.520 -32.148 9.061 -3.570 -0.691 O48 YAV 56 YAV O56 O9 O 0 1 Y N N 6.774 20.319 -29.042 12.167 -0.873 -0.974 O56 YAV 57 YAV O58 O10 O 0 1 N N N 3.306 26.662 -23.456 4.659 1.338 2.191 O58 YAV 58 YAV H1 H1 H 0 1 N N N 0.744 16.672 -4.760 -12.446 -1.265 2.351 H1 YAV 59 YAV H2 H2 H 0 1 N N N 0.445 17.398 -6.375 -11.016 -0.267 1.992 H2 YAV 60 YAV H3 H3 H 0 1 N N N 1.897 14.143 -3.967 -13.822 -3.281 1.434 H3 YAV 61 YAV H4 H4 H 0 1 N N N 4.130 12.723 -2.263 -15.572 -5.409 0.020 H4 YAV 62 YAV H5 H5 H 0 1 N N N 2.597 12.038 -2.900 -14.623 -6.766 0.673 H5 YAV 63 YAV H6 H6 H 0 1 N N N 4.167 11.280 -3.332 -15.002 -5.367 1.706 H6 YAV 64 YAV H7 H7 H 0 1 N N N 0.042 20.345 -9.025 -8.647 2.391 1.285 H7 YAV 65 YAV H8 H8 H 0 1 N N N 0.640 21.802 -13.002 -5.003 4.106 -0.106 H8 YAV 66 YAV H9 H9 H 0 1 N N N 3.072 19.891 -16.382 -2.430 2.916 -3.587 H9 YAV 67 YAV H10 H10 H 0 1 N N N 4.295 21.078 -15.815 -1.558 2.162 -2.231 H10 YAV 68 YAV H11 H11 H 0 1 N N N 2.875 18.454 -11.594 -6.199 0.233 -1.502 H11 YAV 69 YAV H12 H12 H 0 1 N N N 5.642 12.329 -4.990 -12.916 -6.625 -1.036 H12 YAV 70 YAV H13 H13 H 0 1 N N N 5.814 13.794 -6.969 -10.836 -5.558 -1.782 H13 YAV 71 YAV H14 H14 H 0 1 N N N -0.503 21.956 -10.818 -7.031 4.241 1.274 H14 YAV 72 YAV H15 H15 H 0 1 N N N 2.435 22.864 -16.474 -0.475 4.282 -3.033 H15 YAV 73 YAV H16 H16 H 0 1 N N N 1.806 21.530 -17.501 -1.951 5.167 -2.580 H16 YAV 74 YAV H17 H17 H 0 1 N N N 5.365 22.637 -16.789 -0.680 6.436 -0.918 H17 YAV 75 YAV H18 H18 H 0 1 N N N 4.143 23.939 -16.983 0.796 5.551 -1.372 H18 YAV 76 YAV H19 H19 H 0 1 N N N 5.987 22.808 -19.158 0.875 6.453 0.972 H19 YAV 77 YAV H20 H20 H 0 1 N N N 6.079 24.439 -18.411 -0.522 5.427 1.377 H20 YAV 78 YAV H21 H21 H 0 1 N N N 5.265 25.964 -19.344 0.852 4.185 2.975 H21 YAV 79 YAV H22 H22 H 0 1 N N N 3.619 25.689 -18.682 2.250 5.210 2.570 H22 YAV 80 YAV H23 H23 H 0 1 N N N 4.393 26.783 -21.234 2.914 2.958 3.464 H23 YAV 81 YAV H24 H24 H 0 1 N N N 2.749 26.583 -20.539 2.104 2.204 2.070 H24 YAV 82 YAV H25 H25 H 0 1 N N N 0.757 24.603 -23.881 5.373 4.529 0.052 H25 YAV 83 YAV H26 H26 H 0 1 N N N 0.134 23.035 -25.675 7.381 4.899 -1.314 H26 YAV 84 YAV H27 H27 H 0 1 N N N 1.877 22.092 -27.141 9.142 3.190 -1.416 H27 YAV 85 YAV H28 H28 H 0 1 N N N 7.447 24.410 -29.690 10.355 -3.328 2.069 H28 YAV 86 YAV H29 H29 H 0 1 N N N 5.699 24.109 -29.407 9.426 -1.834 1.799 H29 YAV 87 YAV H30 H30 H 0 1 N N N 8.653 22.695 -32.183 12.298 -4.745 1.061 H30 YAV 88 YAV H31 H31 H 0 1 N N N 11.229 21.154 -33.105 14.337 -6.508 -0.464 H31 YAV 89 YAV H32 H32 H 0 1 N N N 10.290 19.945 -34.044 15.739 -5.665 0.236 H32 YAV 90 YAV H33 H33 H 0 1 N N N 9.820 21.678 -34.087 14.325 -6.036 1.252 H33 YAV 91 YAV H34 H34 H 0 1 N N N 9.772 18.563 -32.076 15.677 -3.855 -1.368 H34 YAV 92 YAV H35 H35 H 0 1 N N N 8.286 18.204 -30.140 14.705 -1.689 -1.990 H35 YAV 93 YAV H36 H36 H 0 1 N N N 4.865 24.278 -25.011 6.885 0.701 1.252 H36 YAV 94 YAV H37 H37 H 0 1 N N N 1.972 21.869 -14.546 -3.530 3.885 -1.173 H37 YAV 95 YAV H38 H38 H 0 1 N N N 3.286 24.098 -21.581 3.926 4.135 1.105 H38 YAV 96 YAV H39 H39 H 0 1 N N N -0.934 13.735 -5.755 -13.840 1.791 0.879 H39 YAV 97 YAV H40 H40 H 0 1 N N N 6.526 25.339 -32.878 7.227 -4.487 0.543 H40 YAV 98 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YAV C52 C51 SING N N 1 YAV C51 C50 DOUB Y N 2 YAV C51 C53 SING Y N 3 YAV O48 C46 DOUB N N 4 YAV O47 C46 SING N N 5 YAV C50 C49 SING Y N 6 YAV C53 C54 DOUB Y N 7 YAV C46 C45 SING N N 8 YAV C49 C55 DOUB Y N 9 YAV C49 C44 SING Y N 10 YAV C54 C55 SING Y N 11 YAV C55 O56 SING Y N 12 YAV C45 C44 SING N N 13 YAV C44 C43 DOUB Y N 14 YAV O56 C43 SING Y N 15 YAV C43 C42 SING N N 16 YAV C42 C41 TRIP N N 17 YAV C41 C40 SING N N 18 YAV C39 C40 DOUB Y N 19 YAV C39 C38 SING Y N 20 YAV C40 C57 SING Y N 21 YAV C38 C37 DOUB Y N 22 YAV C57 C36 DOUB Y N 23 YAV C37 C36 SING Y N 24 YAV C36 C35 SING N N 25 YAV O58 C35 DOUB N N 26 YAV C35 N34 SING N N 27 YAV N34 C33 SING N N 28 YAV C33 C32 SING N N 29 YAV O31 C32 SING N N 30 YAV O31 C30 SING N N 31 YAV C30 C29 SING N N 32 YAV O28 C29 SING N N 33 YAV O28 C27 SING N N 34 YAV C27 C26 SING N N 35 YAV C26 N25 SING N N 36 YAV N25 C02 SING N N 37 YAV O01 C02 DOUB N N 38 YAV C02 C03 SING N N 39 YAV C03 C24 DOUB Y N 40 YAV C03 C04 SING Y N 41 YAV C24 C23 SING Y N 42 YAV C04 C05 DOUB Y N 43 YAV C23 C22 DOUB Y N 44 YAV C05 C22 SING Y N 45 YAV C05 C06 SING N N 46 YAV C06 C07 TRIP N N 47 YAV C07 C08 SING N N 48 YAV O21 C08 SING Y N 49 YAV O21 C20 SING Y N 50 YAV C08 C09 DOUB Y N 51 YAV O13 C11 DOUB N N 52 YAV C20 C19 DOUB Y N 53 YAV C20 C14 SING Y N 54 YAV C09 C10 SING N N 55 YAV C09 C14 SING Y N 56 YAV C19 C18 SING Y N 57 YAV C11 C10 SING N N 58 YAV C11 O12 SING N N 59 YAV C14 C15 DOUB Y N 60 YAV C18 C16 DOUB Y N 61 YAV C15 C16 SING Y N 62 YAV C16 C17 SING N N 63 YAV C10 H1 SING N N 64 YAV C10 H2 SING N N 65 YAV C15 H3 SING N N 66 YAV C17 H4 SING N N 67 YAV C17 H5 SING N N 68 YAV C17 H6 SING N N 69 YAV C22 H7 SING N N 70 YAV C24 H8 SING N N 71 YAV C26 H9 SING N N 72 YAV C26 H10 SING N N 73 YAV C04 H11 SING N N 74 YAV C18 H12 SING N N 75 YAV C19 H13 SING N N 76 YAV C23 H14 SING N N 77 YAV C27 H15 SING N N 78 YAV C27 H16 SING N N 79 YAV C29 H17 SING N N 80 YAV C29 H18 SING N N 81 YAV C30 H19 SING N N 82 YAV C30 H20 SING N N 83 YAV C32 H21 SING N N 84 YAV C32 H22 SING N N 85 YAV C33 H23 SING N N 86 YAV C33 H24 SING N N 87 YAV C37 H25 SING N N 88 YAV C38 H26 SING N N 89 YAV C39 H27 SING N N 90 YAV C45 H28 SING N N 91 YAV C45 H29 SING N N 92 YAV C50 H30 SING N N 93 YAV C52 H31 SING N N 94 YAV C52 H32 SING N N 95 YAV C52 H33 SING N N 96 YAV C53 H34 SING N N 97 YAV C54 H35 SING N N 98 YAV C57 H36 SING N N 99 YAV N25 H37 SING N N 100 YAV N34 H38 SING N N 101 YAV O12 H39 SING N N 102 YAV O47 H40 SING N N 103 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YAV InChI InChI 1.03 "InChI=1S/C46H40N2O10/c1-29-9-13-39-35(23-29)37(27-43(49)50)41(57-39)15-11-31-5-3-7-33(25-31)45(53)47-17-19-55-21-22-56-20-18-48-46(54)34-8-4-6-32(26-34)12-16-42-38(28-44(51)52)36-24-30(2)10-14-40(36)58-42/h3-10,13-14,23-26H,17-22,27-28H2,1-2H3,(H,47,53)(H,48,54)(H,49,50)(H,51,52)" YAV InChIKey InChI 1.03 CNJSVQQGSQPFLB-UHFFFAOYSA-N YAV SMILES_CANONICAL CACTVS 3.385 "Cc1ccc2oc(C#Cc3cccc(c3)C(=O)NCCOCCOCCNC(=O)c4cccc(c4)C#Cc5oc6ccc(C)cc6c5CC(O)=O)c(CC(O)=O)c2c1" YAV SMILES CACTVS 3.385 "Cc1ccc2oc(C#Cc3cccc(c3)C(=O)NCCOCCOCCNC(=O)c4cccc(c4)C#Cc5oc6ccc(C)cc6c5CC(O)=O)c(CC(O)=O)c2c1" YAV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc2c(c1)c(c(o2)C#Cc3cccc(c3)C(=O)NCCOCCOCCNC(=O)c4cccc(c4)C#Cc5c(c6cc(ccc6o5)C)CC(=O)O)CC(=O)O" YAV SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc2c(c1)c(c(o2)C#Cc3cccc(c3)C(=O)NCCOCCOCCNC(=O)c4cccc(c4)C#Cc5c(c6cc(ccc6o5)C)CC(=O)O)CC(=O)O" # _pdbx_chem_comp_identifier.comp_id YAV _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[2-[2-[3-[2-[2-[2-[[3-[2-[3-(2-hydroxy-2-oxoethyl)-5-methyl-1-benzofuran-2-yl]ethynyl]phenyl]carbonylamino]ethoxy]ethoxy]ethylcarbamoyl]phenyl]ethynyl]-5-methyl-1-benzofuran-3-yl]ethanoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YAV "Create component" 2021-02-15 RCSB YAV "Initial release" 2022-02-23 RCSB ##