data_YB6 # _chem_comp.id YB6 _chem_comp.name "N-{5-[(4-fluorophenyl)ethynyl]pyridin-2-yl}acetamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H11 F N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-12 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 254.259 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YB6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G5B _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YB6 C01 C1 C 0 1 N N N N N N -13.184 6.517 46.144 -0.552 0.257 -0.015 C01 YB6 1 YB6 C02 C2 C 0 1 N N N N N N -12.650 5.715 45.447 -1.721 0.151 -0.008 C02 YB6 2 YB6 N03 N1 N 0 1 N N N N N N -15.755 10.199 49.444 4.988 0.619 -0.050 N03 YB6 3 YB6 C05 C3 C 0 1 Y N N N N N -15.026 9.299 48.620 3.596 0.552 -0.041 C05 YB6 4 YB6 C06 C4 C 0 1 N N N N N N -15.205 11.303 50.120 5.718 -0.511 0.022 C06 YB6 5 YB6 C10 C5 C 0 1 Y N N N N N -15.148 7.340 47.314 1.689 -0.747 -0.049 C10 YB6 6 YB6 C11 C6 C 0 1 Y N N N N N -10.941 2.678 43.083 -5.906 -0.229 0.014 C11 YB6 7 YB6 C15 C7 C 0 1 Y N N N N N -11.148 5.032 43.574 -3.955 1.161 0.026 C15 YB6 8 YB6 C16 C8 C 0 1 Y N N N N N -12.421 3.378 44.884 -3.737 -1.246 -0.013 C16 YB6 9 YB6 C17 C9 C 0 1 Y N N N N N -10.587 3.995 42.815 -5.327 1.030 0.033 C17 YB6 10 YB6 C18 C10 C 0 1 Y N N N N N -11.853 2.361 44.112 -5.110 -1.364 -0.005 C18 YB6 11 YB6 C19 C11 C 0 1 N N N N N N -16.191 12.111 50.909 7.219 -0.433 0.128 C19 YB6 12 YB6 N04 N2 N 0 1 Y N N N N N -15.758 8.240 48.110 3.001 -0.631 -0.057 N04 YB6 13 YB6 O07 O1 O 0 1 N N N N N N -13.997 11.584 50.018 5.167 -1.591 0.002 O07 YB6 14 YB6 C08 C12 C 0 1 Y N N N N N -13.810 7.526 47.024 0.874 0.386 -0.023 C08 YB6 15 YB6 C09 C13 C 0 1 Y N N N N N -12.043 4.693 44.595 -3.147 0.021 -0.000 C09 YB6 16 YB6 C12 C14 C 0 1 Y N N N N N -13.662 9.499 48.349 2.853 1.728 -0.009 C12 YB6 17 YB6 F13 F1 F 0 1 N N N N N N -10.432 1.680 42.331 -7.252 -0.352 0.021 F13 YB6 18 YB6 C14 C15 C 0 1 Y N N N N N -13.069 8.573 47.526 1.474 1.655 -0.000 C14 YB6 19 YB6 H20 H1 H 0 1 N N N N N N -16.735 10.034 49.551 5.431 1.480 -0.113 H20 YB6 20 YB6 H21 H2 H 0 1 N N N N N N -15.690 6.496 46.914 1.239 -1.729 -0.064 H21 YB6 21 YB6 H24 H3 H 0 1 N N N N N N -10.896 6.063 43.376 -3.505 2.143 0.040 H24 YB6 22 YB6 H25 H4 H 0 1 N N N N N N -13.124 3.157 45.673 -3.117 -2.131 -0.029 H25 YB6 23 YB6 H26 H5 H 0 1 N N N N N N -9.884 4.218 42.026 -5.953 1.910 0.053 H26 YB6 24 YB6 H27 H6 H 0 1 N N N N N N -12.113 1.330 44.303 -5.567 -2.343 -0.016 H27 YB6 25 YB6 H29 H7 H 0 1 N N N N N N -15.679 12.969 51.368 7.529 0.612 0.131 H29 YB6 26 YB6 H28 H8 H 0 1 N N N N N N -16.986 12.474 50.241 7.544 -0.911 1.052 H28 YB6 27 YB6 H30 H9 H 0 1 N N N N N N -16.632 11.483 51.697 7.671 -0.943 -0.723 H30 YB6 28 YB6 H22 H10 H 0 1 N N N N N N -13.112 10.331 48.763 3.349 2.687 0.008 H22 YB6 29 YB6 H23 H11 H 0 1 N N N N N N -12.023 8.666 47.273 0.873 2.551 0.021 H23 YB6 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YB6 C01 C02 TRIP N N 1 YB6 N03 C05 SING N N 2 YB6 N04 C05 DOUB Y N 3 YB6 N03 C06 SING N N 4 YB6 C06 O07 DOUB N N 5 YB6 C01 C08 SING N N 6 YB6 C02 C09 SING N N 7 YB6 N04 C10 SING Y N 8 YB6 C08 C10 DOUB Y N 9 YB6 C05 C12 SING Y N 10 YB6 C11 F13 SING N N 11 YB6 C08 C14 SING Y N 12 YB6 C12 C14 DOUB Y N 13 YB6 C09 C15 DOUB Y N 14 YB6 C09 C16 SING Y N 15 YB6 C11 C17 DOUB Y N 16 YB6 C15 C17 SING Y N 17 YB6 C11 C18 SING Y N 18 YB6 C16 C18 DOUB Y N 19 YB6 C06 C19 SING N N 20 YB6 N03 H20 SING N N 21 YB6 C10 H21 SING N N 22 YB6 C15 H24 SING N N 23 YB6 C16 H25 SING N N 24 YB6 C17 H26 SING N N 25 YB6 C18 H27 SING N N 26 YB6 C19 H29 SING N N 27 YB6 C19 H28 SING N N 28 YB6 C19 H30 SING N N 29 YB6 C12 H22 SING N N 30 YB6 C14 H23 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YB6 SMILES ACDLabs 12.01 "O=C(C)Nc1ccc(cn1)C#Cc1ccc(F)cc1" YB6 InChI InChI 1.06 "InChI=1S/C15H11FN2O/c1-11(19)18-15-9-6-13(10-17-15)3-2-12-4-7-14(16)8-5-12/h4-10H,1H3,(H,17,18,19)" YB6 InChIKey InChI 1.06 RQNJAESPZDCRIQ-UHFFFAOYSA-N YB6 SMILES_CANONICAL CACTVS 3.385 "CC(=O)Nc1ccc(cn1)C#Cc2ccc(F)cc2" YB6 SMILES CACTVS 3.385 "CC(=O)Nc1ccc(cn1)C#Cc2ccc(F)cc2" YB6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)Nc1ccc(cn1)C#Cc2ccc(cc2)F" YB6 SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)Nc1ccc(cn1)C#Cc2ccc(cc2)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YB6 "SYSTEMATIC NAME" ACDLabs 12.01 "N-{5-[(4-fluorophenyl)ethynyl]pyridin-2-yl}acetamide" YB6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[5-[2-(4-fluorophenyl)ethynyl]pyridin-2-yl]ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YB6 "Create component" 2023-06-12 RCSB YB6 "Initial release" 2024-12-18 RCSB #