data_YCC # _chem_comp.id YCC _chem_comp.name "methyl 3-[[(2~{R},4~{a}~{S},6~{a}~{R},6~{a}~{S},14~{a}~{S},14~{b}~{R})-2,4~{a},6~{a},6~{a},9,14~{a}-hexamethyl-10-oxidanyl-11-oxidanylidene-1,3,4,5,6,13,14,14~{b}-octahydropicen-2-yl]carbamoylamino]oxetane-3-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C34 H46 N2 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-11-29 _chem_comp.pdbx_modified_date 2024-06-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 578.739 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YCC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8X71 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YCC C1 C1 C 0 1 N N N N N N -22.759 54.435 4.279 5.321 2.126 0.979 C1 YCC 1 YCC C10 C2 C 0 1 N N R N N N -26.372 55.743 5.431 3.410 -0.694 -0.794 C10 YCC 2 YCC C11 C3 C 0 1 N N S N N N -27.868 57.040 3.663 1.884 -2.443 0.395 C11 YCC 3 YCC C12 C4 C 0 1 N N S N N N -28.951 55.959 3.950 0.727 -1.925 -0.476 C12 YCC 4 YCC C13 C5 C 0 1 N N N N N N -28.844 55.572 5.341 1.291 -1.589 -1.862 C13 YCC 5 YCC C14 C6 C 0 1 N N N N N N -27.561 54.879 5.676 2.279 -0.431 -1.779 C14 YCC 6 YCC C15 C7 C 0 1 N N N N N N -28.007 57.359 2.206 1.338 -2.747 1.791 C15 YCC 7 YCC C16 C8 C 0 1 N N N N N N -29.351 57.966 1.856 0.306 -3.866 1.709 C16 YCC 8 YCC C17 C9 C 0 1 N N S N N N -30.621 57.298 2.363 -0.838 -3.549 0.749 C17 YCC 9 YCC C18 C10 C 0 1 N N R N N N -30.441 56.549 3.671 -0.371 -2.960 -0.571 C18 YCC 10 YCC C19 C11 C 0 1 N N N N N N -31.202 56.381 1.222 -1.874 -2.666 1.433 C19 YCC 11 YCC C2 C12 C 0 1 N N N N N N -23.896 55.157 4.308 4.582 0.938 0.775 C2 YCC 12 YCC C20 C13 C 0 1 N N N N N N -32.614 55.702 1.612 -3.095 -2.499 0.534 C20 YCC 13 YCC C21 C14 C 0 1 N N R N N N -32.373 54.727 2.828 -2.718 -1.893 -0.814 C21 YCC 14 YCC C22 C15 C 0 1 N N N N N N -31.480 55.458 3.848 -1.532 -2.574 -1.472 C22 YCC 15 YCC C23 C16 C 0 1 N N N N N N -21.683 54.741 3.211 5.798 2.519 2.354 C23 YCC 16 YCC C24 C17 C 0 1 N N N N N N -28.194 58.351 4.468 2.495 -3.718 -0.180 C24 YCC 17 YCC C25 C18 C 0 1 N N N N N N -26.165 56.724 6.630 4.427 -1.623 -1.474 C25 YCC 18 YCC C26 C19 C 0 1 N N N N N N -31.681 58.412 2.603 -1.511 -4.910 0.435 C26 YCC 19 YCC C27 C20 C 0 1 N N N N N N -28.659 54.697 3.055 0.232 -0.615 0.147 C27 YCC 20 YCC C28 C21 C 0 1 N N N N N N -33.674 54.259 3.438 -3.937 -2.109 -1.751 C28 YCC 21 YCC C29 C22 C 0 1 N N N N N N -31.105 52.453 3.015 -3.525 0.312 -0.174 C29 YCC 22 YCC C3 C23 C 0 1 N N N N N N -24.969 54.816 5.402 4.160 0.587 -0.530 C3 YCC 23 YCC C30 C24 C 0 1 N N N N N N -29.823 50.247 2.767 -4.378 2.456 0.610 C30 YCC 24 YCC C31 C25 C 0 1 N N N N N N -29.821 49.066 2.012 -3.868 3.833 1.074 C31 YCC 25 YCC C32 C26 C 0 1 N N N N N N -30.290 49.784 4.008 -4.532 2.134 2.109 C32 YCC 26 YCC C33 C27 C 0 1 N N N N N N -28.312 50.908 2.765 -5.685 2.511 -0.138 C33 YCC 27 YCC C34 C28 C 0 1 N N N N N N -26.141 51.303 3.648 -7.004 2.359 -2.117 C34 YCC 28 YCC C4 C29 C 0 1 N N N N N N -24.865 53.850 6.349 4.445 1.406 -1.576 C4 YCC 29 YCC C5 C30 C 0 1 N N N N N N -23.555 52.953 6.385 5.172 2.594 -1.372 C5 YCC 30 YCC C6 C31 C 0 1 N N N N N N -22.506 53.378 5.212 5.611 2.940 -0.073 C6 YCC 31 YCC C7 C32 C 0 1 N N N N N N -24.339 56.376 3.337 4.263 0.102 1.846 C7 YCC 32 YCC C8 C33 C 0 1 N N N N N N -25.651 56.740 3.214 3.365 -0.960 1.670 C8 YCC 33 YCC C9 C34 C 0 1 N N N N N N -26.455 56.445 4.164 2.915 -1.335 0.466 C9 YCC 34 YCC N1 N1 N 0 1 N N N N N N -31.698 53.551 2.238 -2.542 -0.447 -0.698 N1 YCC 35 YCC N2 N2 N 0 1 N N N N N N -30.547 51.377 2.181 -3.362 1.646 -0.067 N2 YCC 36 YCC O1 O1 O 0 1 N N N N N N -23.348 51.927 7.316 5.425 3.326 -2.319 O1 YCC 37 YCC O2 O2 O 0 1 N N N N N N -21.291 52.674 5.115 6.316 4.084 0.130 O2 YCC 38 YCC O3 O3 O 0 1 N N N N N N -31.090 52.423 4.209 -4.558 -0.206 0.203 O3 YCC 39 YCC O4 O4 O 0 1 N N N N N N -29.835 48.319 3.462 -3.555 3.173 2.316 O4 YCC 40 YCC O5 O5 O 0 1 N N N N N N -27.960 51.469 1.767 -6.710 2.755 0.453 O5 YCC 41 YCC O6 O6 O 0 1 N N N N N N -27.469 50.858 3.880 -5.710 2.290 -1.462 O6 YCC 42 YCC H1 H1 H 0 1 N N N N N N -28.921 56.478 5.960 1.753 -2.461 -2.311 H1 YCC 43 YCC H2 H2 H 0 1 N N N N N N -29.677 54.894 5.578 0.456 -1.283 -2.507 H2 YCC 44 YCC H3 H3 H 0 1 N N N N N N -27.579 54.595 6.739 1.778 0.506 -1.543 H3 YCC 45 YCC H4 H4 H 0 1 N N N N N N -27.475 53.974 5.056 2.727 -0.299 -2.782 H4 YCC 46 YCC H5 H5 H 0 1 N N N N N N -27.882 56.430 1.631 2.175 -3.097 2.416 H5 YCC 47 YCC H6 H6 H 0 1 N N N N N N -27.217 58.072 1.927 0.917 -1.866 2.257 H6 YCC 48 YCC H7 H7 H 0 1 N N N N N N -29.351 58.994 2.246 0.775 -4.808 1.426 H7 YCC 49 YCC H8 H8 H 0 1 N N N N N N -29.417 57.990 0.758 -0.123 -4.014 2.713 H8 YCC 50 YCC H9 H9 H 0 1 N N N N N N -30.618 57.280 4.474 0.095 -3.836 -1.117 H9 YCC 51 YCC H10 H10 H 0 1 N N N N N N -30.476 55.582 1.011 -2.194 -3.161 2.363 H10 YCC 52 YCC H11 H11 H 0 1 N N N N N N -31.346 56.994 0.320 -1.463 -1.702 1.704 H11 YCC 53 YCC H12 H12 H 0 1 N N N N N N -33.336 56.482 1.897 -3.616 -3.441 0.394 H12 YCC 54 YCC H13 H13 H 0 1 N N N N N N -33.005 55.137 0.753 -3.797 -1.812 1.035 H13 YCC 55 YCC H14 H14 H 0 1 N N N N N N -32.198 55.893 4.559 -1.160 -1.920 -2.276 H14 YCC 56 YCC H15 H15 H 0 1 N N N N N N -30.925 54.645 4.339 -1.893 -3.483 -1.984 H15 YCC 57 YCC H16 H16 H 0 1 N N N N N N -20.832 54.056 3.341 6.787 2.096 2.531 H16 YCC 58 YCC H17 H17 H 0 1 N N N N N N -22.113 54.605 2.208 5.850 3.606 2.424 H17 YCC 59 YCC H18 H18 H 0 1 N N N N N N -21.339 55.780 3.325 5.102 2.140 3.102 H18 YCC 60 YCC H19 H19 H 0 1 N N N N N N -28.101 58.153 5.546 2.763 -3.554 -1.224 H19 YCC 61 YCC H20 H20 H 0 1 N N N N N N -27.488 59.144 4.179 3.388 -3.981 0.387 H20 YCC 62 YCC H21 H21 H 0 1 N N N N N N -29.221 58.674 4.242 1.770 -4.530 -0.113 H21 YCC 63 YCC H22 H22 H 0 1 N N N N N N -26.108 56.151 7.567 4.872 -1.112 -2.328 H22 YCC 64 YCC H23 H23 H 0 1 N N N N N N -25.231 57.286 6.486 5.209 -1.889 -0.763 H23 YCC 65 YCC H24 H24 H 0 1 N N N N N N -27.011 57.425 6.680 3.923 -2.527 -1.814 H24 YCC 66 YCC H25 H25 H 0 1 N N N N N N -31.329 59.089 3.395 -1.880 -5.355 1.359 H25 YCC 67 YCC H26 H26 H 0 1 N N N N N N -31.831 58.982 1.674 -2.344 -4.754 -0.251 H26 YCC 68 YCC H27 H27 H 0 1 N N N N N N -32.633 57.953 2.909 -0.783 -5.578 -0.024 H27 YCC 69 YCC H28 H28 H 0 1 N N N N N N -29.419 53.925 3.249 1.084 -0.046 0.519 H28 YCC 70 YCC H29 H29 H 0 1 N N N N N N -28.692 54.985 1.994 -0.294 -0.030 -0.607 H29 YCC 71 YCC H30 H30 H 0 1 N N N N N N -27.662 54.299 3.296 -0.444 -0.838 0.972 H30 YCC 72 YCC H31 H31 H 0 1 N N N N N N -33.463 53.583 4.280 -4.812 -1.612 -1.331 H31 YCC 73 YCC H32 H32 H 0 1 N N N N N N -34.243 55.128 3.800 -3.719 -1.691 -2.734 H32 YCC 74 YCC H33 H33 H 0 1 N N N N N N -34.264 53.725 2.678 -4.137 -3.177 -1.846 H33 YCC 75 YCC H34 H34 H 0 1 N N N N N N -30.715 48.904 1.392 -2.992 4.185 0.529 H34 YCC 76 YCC H35 H35 H 0 1 N N N N N N -28.919 48.898 1.406 -4.650 4.587 1.160 H35 YCC 77 YCC H36 H36 H 0 1 N N N N N N -29.736 50.151 4.885 -5.518 2.369 2.511 H36 YCC 78 YCC H37 H37 H 0 1 N N N N N N -31.370 49.907 4.179 -4.186 1.138 2.384 H37 YCC 79 YCC H38 H38 H 0 1 N N N N N N -25.560 51.226 4.579 -7.672 1.615 -1.683 H38 YCC 80 YCC H39 H39 H 0 1 N N N N N N -25.675 50.678 2.872 -7.429 3.354 -1.979 H39 YCC 81 YCC H40 H40 H 0 1 N N N N N N -26.159 52.351 3.313 -6.883 2.161 -3.182 H40 YCC 82 YCC H41 H41 H 0 1 N N N N N N -25.658 53.694 7.065 4.115 1.151 -2.572 H41 YCC 83 YCC H42 H42 H 0 1 N N N N N N -23.585 56.910 2.778 4.657 0.278 2.834 H42 YCC 84 YCC H44 H44 H 0 1 N N N N N N -26.000 57.264 2.336 3.033 -1.492 2.548 H44 YCC 85 YCC H45 H45 H 0 1 N N N N N N -31.641 53.499 1.241 -1.718 -0.033 -0.999 H45 YCC 86 YCC H46 H46 H 0 1 N N N N N N -30.665 51.418 1.189 -2.573 2.069 -0.439 H46 YCC 87 YCC H48 H48 H 0 1 N N N N N N -21.256 52.007 5.790 6.473 4.597 -0.674 H48 YCC 88 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YCC C19 C20 SING N N 1 YCC C19 C17 SING N N 2 YCC C20 C21 SING N N 3 YCC O5 C33 DOUB N N 4 YCC C16 C15 SING N N 5 YCC C16 C17 SING N N 6 YCC C31 C30 SING N N 7 YCC C31 O4 SING N N 8 YCC N2 C30 SING N N 9 YCC N2 C29 SING N N 10 YCC C15 C11 SING N N 11 YCC N1 C21 SING N N 12 YCC N1 C29 SING N N 13 YCC C17 C26 SING N N 14 YCC C17 C18 SING N N 15 YCC C33 C30 SING N N 16 YCC C33 O6 SING N N 17 YCC C30 C32 SING N N 18 YCC C21 C28 SING N N 19 YCC C21 C22 SING N N 20 YCC C29 O3 DOUB N N 21 YCC C27 C12 SING N N 22 YCC C23 C1 SING N N 23 YCC C8 C7 SING N N 24 YCC C8 C9 DOUB N N 25 YCC C7 C2 DOUB N N 26 YCC O4 C32 SING N N 27 YCC C34 O6 SING N N 28 YCC C11 C12 SING N N 29 YCC C11 C9 SING N N 30 YCC C11 C24 SING N N 31 YCC C18 C22 SING N N 32 YCC C18 C12 SING N N 33 YCC C12 C13 SING N N 34 YCC C9 C10 SING N N 35 YCC C1 C2 SING N N 36 YCC C1 C6 DOUB N N 37 YCC C2 C3 SING N N 38 YCC O2 C6 SING N N 39 YCC C6 C5 SING N N 40 YCC C13 C14 SING N N 41 YCC C3 C10 SING N N 42 YCC C3 C4 DOUB N N 43 YCC C10 C14 SING N N 44 YCC C10 C25 SING N N 45 YCC C4 C5 SING N N 46 YCC C5 O1 DOUB N N 47 YCC C13 H1 SING N N 48 YCC C13 H2 SING N N 49 YCC C14 H3 SING N N 50 YCC C14 H4 SING N N 51 YCC C15 H5 SING N N 52 YCC C15 H6 SING N N 53 YCC C16 H7 SING N N 54 YCC C16 H8 SING N N 55 YCC C18 H9 SING N N 56 YCC C19 H10 SING N N 57 YCC C19 H11 SING N N 58 YCC C20 H12 SING N N 59 YCC C20 H13 SING N N 60 YCC C22 H14 SING N N 61 YCC C22 H15 SING N N 62 YCC C23 H16 SING N N 63 YCC C23 H17 SING N N 64 YCC C23 H18 SING N N 65 YCC C24 H19 SING N N 66 YCC C24 H20 SING N N 67 YCC C24 H21 SING N N 68 YCC C25 H22 SING N N 69 YCC C25 H23 SING N N 70 YCC C25 H24 SING N N 71 YCC C26 H25 SING N N 72 YCC C26 H26 SING N N 73 YCC C26 H27 SING N N 74 YCC C27 H28 SING N N 75 YCC C27 H29 SING N N 76 YCC C27 H30 SING N N 77 YCC C28 H31 SING N N 78 YCC C28 H32 SING N N 79 YCC C28 H33 SING N N 80 YCC C31 H34 SING N N 81 YCC C31 H35 SING N N 82 YCC C32 H36 SING N N 83 YCC C32 H37 SING N N 84 YCC C34 H38 SING N N 85 YCC C34 H39 SING N N 86 YCC C34 H40 SING N N 87 YCC C4 H41 SING N N 88 YCC C7 H42 SING N N 89 YCC C8 H44 SING N N 90 YCC N1 H45 SING N N 91 YCC N2 H46 SING N N 92 YCC O2 H48 SING N N 93 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YCC InChI InChI 1.06 "InChI=1S/C34H46N2O6/c1-20-21-8-9-24-31(4,22(21)16-23(37)26(20)38)13-15-33(6)25-17-30(3,12-10-29(25,2)11-14-32(24,33)5)35-28(40)36-34(18-42-19-34)27(39)41-7/h8-9,16,25,38H,10-15,17-19H2,1-7H3,(H2,35,36,40)/t25-,29-,30-,31+,32-,33+/m1/s1" YCC InChIKey InChI 1.06 DSRGJYYWXNYGJM-MRZDQBBQSA-N YCC SMILES_CANONICAL CACTVS 3.385 "COC(=O)C1(COC1)NC(=O)N[C@]2(C)CC[C@]3(C)CC[C@]4(C)C5=CC=C6C(=C(O)C(=O)C=C6[C@]5(C)CC[C@@]4(C)[C@@H]3C2)C" YCC SMILES CACTVS 3.385 "COC(=O)C1(COC1)NC(=O)N[C]2(C)CC[C]3(C)CC[C]4(C)C5=CC=C6C(=C(O)C(=O)C=C6[C]5(C)CC[C]4(C)[CH]3C2)C" YCC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=C(C(=O)C=C2C1=CC=C3[C@]2(CC[C@@]4([C@@]3(CC[C@@]5([C@H]4C[C@](CC5)(C)NC(=O)NC6(COC6)C(=O)OC)C)C)C)C)O" YCC SMILES "OpenEye OEToolkits" 2.0.7 "CC1=C(C(=O)C=C2C1=CC=C3C2(CCC4(C3(CCC5(C4CC(CC5)(C)NC(=O)NC6(COC6)C(=O)OC)C)C)C)C)O" # _pdbx_chem_comp_identifier.comp_id YCC _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "methyl 3-[[(2~{R},4~{a}~{S},6~{a}~{R},6~{a}~{S},14~{a}~{S},14~{b}~{R})-2,4~{a},6~{a},6~{a},9,14~{a}-hexamethyl-10-oxidanyl-11-oxidanylidene-1,3,4,5,6,13,14,14~{b}-octahydropicen-2-yl]carbamoylamino]oxetane-3-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YCC "Create component" 2023-11-29 PDBJ YCC "Initial release" 2024-06-19 RCSB #