data_YD7 # _chem_comp.id YD7 _chem_comp.name "~{N}-[(5~{R})-2-[2-[(1-methylpyrazol-4-yl)amino]pyrimidin-4-yl]-6,7,8,9-tetrahydro-5~{H}-benzo[7]annulen-5-yl]-3-propan-2-yloxy-azetidine-1-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H33 N7 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-02-22 _chem_comp.pdbx_modified_date 2022-01-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 475.586 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YD7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7LTY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YD7 N1 N1 N 0 1 N N N 12.491 9.751 50.894 3.650 -1.789 -0.311 N1 YD7 1 YD7 N3 N2 N 0 1 Y N N 15.747 6.087 56.410 -3.216 -0.370 -0.027 N3 YD7 2 YD7 C4 C1 C 0 1 N N N 14.139 13.073 46.148 6.380 4.067 -0.137 C4 YD7 3 YD7 C5 C2 C 0 1 N N N 15.523 13.550 46.467 6.065 5.018 1.019 C5 YD7 4 YD7 C6 C3 C 0 1 N N N 13.724 13.428 44.753 7.627 4.557 -0.876 C6 YD7 5 YD7 C7 C4 C 0 1 N N N 13.897 9.457 47.449 5.477 0.910 1.600 C7 YD7 6 YD7 C8 C5 C 0 1 N N R 11.932 9.040 52.045 2.785 -2.965 -0.184 C8 YD7 7 YD7 C10 C6 C 0 1 N N N 10.131 9.478 53.858 2.983 -2.870 -2.685 C10 YD7 8 YD7 C13 C7 C 0 1 Y N N 12.651 7.424 53.866 0.788 -1.567 -0.747 C13 YD7 9 YD7 C15 C8 C 0 1 Y N N 14.365 8.458 52.527 0.633 -3.094 1.090 C15 YD7 10 YD7 C17 C9 C 0 1 Y N N 15.001 6.926 54.289 -1.252 -1.726 0.504 C17 YD7 11 YD7 C20 C10 C 0 1 Y N N 15.219 5.756 59.259 -6.348 1.403 -0.424 C20 YD7 12 YD7 C21 C11 C 0 1 Y N N 14.082 6.351 58.751 -7.016 2.333 -1.154 C21 YD7 13 YD7 C22 C12 C 0 1 N N N 11.881 7.057 59.783 -9.325 3.333 -1.112 C22 YD7 14 YD7 C24 C13 C 0 1 Y N N 18.189 5.377 55.524 -4.699 -1.428 1.969 C24 YD7 15 YD7 C26 C14 C 0 1 Y N N 13.646 6.761 54.578 -0.515 -1.159 -0.534 C26 YD7 16 YD7 C1 C15 C 0 1 N N N 12.833 9.129 49.749 4.053 -1.128 0.792 C1 YD7 17 YD7 C11 C16 C 0 1 N N N 10.546 8.430 54.886 1.774 -2.000 -2.970 C11 YD7 18 YD7 C12 C17 C 0 1 N N N 11.195 7.210 54.244 1.587 -0.948 -1.875 C12 YD7 19 YD7 C14 C18 C 0 1 Y N N 13.010 8.292 52.817 1.356 -2.524 0.056 C14 YD7 20 YD7 C16 C19 C 0 1 Y N N 15.349 7.782 53.243 -0.670 -2.697 1.316 C16 YD7 21 YD7 C18 C20 C 0 1 Y N N 16.044 6.256 55.112 -2.651 -1.297 0.744 C18 YD7 22 YD7 C19 C21 C 0 1 Y N N 16.686 5.563 57.217 -4.464 0.014 0.186 C19 YD7 23 YD7 C2 C22 C 0 1 N N N 13.541 11.345 48.652 5.467 0.700 -0.430 C2 YD7 24 YD7 C23 C23 C 0 1 Y N N 14.956 5.569 60.614 -7.216 0.933 0.572 C23 YD7 25 YD7 C25 C24 C 0 1 Y N N 17.292 5.916 54.619 -3.398 -1.860 1.783 C25 YD7 26 YD7 C3 C25 C 0 1 N N N 14.375 10.966 47.380 5.443 1.945 0.467 C3 YD7 27 YD7 C9 C26 C 0 1 N N N 11.229 10.052 52.962 2.830 -3.778 -1.480 C9 YD7 28 YD7 N2 N3 N 0 1 N N N 13.354 9.890 48.743 4.848 -0.045 0.676 N2 YD7 29 YD7 N4 N4 N 0 1 N N N 16.389 5.383 58.561 -5.021 0.981 -0.634 N4 YD7 30 YD7 N5 N5 N 0 1 Y N N 13.224 6.484 59.791 -8.265 2.443 -0.631 N5 YD7 31 YD7 N6 N6 N 0 1 Y N N 13.751 5.999 60.953 -8.361 1.555 0.447 N6 YD7 32 YD7 N7 N7 N 0 1 Y N N 17.913 5.197 56.811 -5.195 -0.502 1.163 N7 YD7 33 YD7 O1 O1 O 0 1 N N N 12.721 7.904 49.612 3.699 -1.507 1.892 O1 YD7 34 YD7 O2 O2 O 0 1 N N N 14.094 11.633 46.191 6.617 2.755 0.377 O2 YD7 35 YD7 H1 H1 H 0 1 N N N 12.625 10.740 50.960 3.935 -1.489 -1.188 H1 YD7 36 YD7 H2 H2 H 0 1 N N N 13.425 13.502 46.867 5.536 4.040 -0.826 H2 YD7 37 YD7 H3 H3 H 0 1 N N N 15.781 13.266 47.498 5.177 4.669 1.545 H3 YD7 38 YD7 H4 H4 H 0 1 N N N 16.239 13.090 45.770 6.909 5.045 1.708 H4 YD7 39 YD7 H5 H5 H 0 1 N N N 15.566 14.645 46.366 5.885 6.019 0.627 H5 YD7 40 YD7 H6 H6 H 0 1 N N N 13.732 14.522 44.635 7.851 3.880 -1.700 H6 YD7 41 YD7 H7 H7 H 0 1 N N N 14.425 12.977 44.036 7.446 5.558 -1.268 H7 YD7 42 YD7 H8 H8 H 0 1 N N N 12.710 13.046 44.564 8.471 4.584 -0.187 H8 YD7 43 YD7 H9 H9 H 0 1 N N N 13.154 9.157 46.696 6.486 0.626 1.898 H9 YD7 44 YD7 H10 H10 H 0 1 N N N 14.698 8.704 47.495 4.846 1.173 2.449 H10 YD7 45 YD7 H11 H11 H 0 1 N N N 11.185 8.313 51.695 3.124 -3.580 0.649 H11 YD7 46 YD7 H12 H12 H 0 1 N N N 9.678 10.318 54.406 3.179 -3.488 -3.561 H12 YD7 47 YD7 H13 H13 H 0 1 N N N 9.376 9.018 53.203 3.844 -2.223 -2.523 H13 YD7 48 YD7 H14 H14 H 0 1 N N N 14.657 9.126 51.730 1.088 -3.846 1.718 H14 YD7 49 YD7 H15 H15 H 0 1 N N N 13.910 6.651 57.728 -6.625 2.885 -1.995 H15 YD7 50 YD7 H16 H16 H 0 1 N N N 11.456 7.010 60.796 -9.919 2.818 -1.867 H16 YD7 51 YD7 H17 H17 H 0 1 N N N 11.932 8.106 59.455 -9.966 3.618 -0.278 H17 YD7 52 YD7 H18 H18 H 0 1 N N N 11.243 6.487 59.091 -8.879 4.227 -1.549 H18 YD7 53 YD7 H19 H19 H 0 1 N N N 19.166 5.087 55.165 -5.304 -1.842 2.762 H19 YD7 54 YD7 H20 H20 H 0 1 N N N 13.360 6.097 55.380 -0.959 -0.405 -1.168 H20 YD7 55 YD7 H21 H21 H 0 1 N N N 11.264 8.885 55.584 1.912 -1.500 -3.929 H21 YD7 56 YD7 H22 H22 H 0 1 N N N 9.652 8.105 55.439 0.884 -2.628 -3.019 H22 YD7 57 YD7 H23 H23 H 0 1 N N N 10.633 6.956 53.333 1.047 -0.091 -2.279 H23 YD7 58 YD7 H24 H24 H 0 1 N N N 11.140 6.372 54.955 2.560 -0.629 -1.503 H24 YD7 59 YD7 H25 H25 H 0 1 N N N 16.389 7.921 52.987 -1.237 -3.140 2.122 H25 YD7 60 YD7 H26 H26 H 0 1 N N N 14.110 11.804 49.474 4.826 0.785 -1.308 H26 YD7 61 YD7 H27 H27 H 0 1 N N N 12.629 11.931 48.465 6.473 0.359 -0.674 H27 YD7 62 YD7 H28 H28 H 0 1 N N N 15.654 5.125 61.308 -6.981 0.185 1.314 H28 YD7 63 YD7 H29 H29 H 0 1 N N N 17.552 6.064 53.581 -2.969 -2.614 2.426 H29 YD7 64 YD7 H30 H30 H 0 1 N N N 15.446 11.011 47.626 4.517 2.517 0.412 H30 YD7 65 YD7 H31 H31 H 0 1 N N N 11.991 10.508 53.611 3.675 -4.467 -1.442 H31 YD7 66 YD7 H32 H32 H 0 1 N N N 10.777 10.828 52.327 1.907 -4.350 -1.577 H32 YD7 67 YD7 H33 H33 H 0 1 N N N 17.095 4.931 59.106 -4.497 1.367 -1.354 H33 YD7 68 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YD7 C6 C4 SING N N 1 YD7 C4 O2 SING N N 2 YD7 C4 C5 SING N N 3 YD7 O2 C3 SING N N 4 YD7 C3 C7 SING N N 5 YD7 C3 C2 SING N N 6 YD7 C7 N2 SING N N 7 YD7 C2 N2 SING N N 8 YD7 N2 C1 SING N N 9 YD7 O1 C1 DOUB N N 10 YD7 C1 N1 SING N N 11 YD7 N1 C8 SING N N 12 YD7 C8 C14 SING N N 13 YD7 C8 C9 SING N N 14 YD7 C15 C14 DOUB Y N 15 YD7 C15 C16 SING Y N 16 YD7 C14 C13 SING Y N 17 YD7 C9 C10 SING N N 18 YD7 C16 C17 DOUB Y N 19 YD7 C10 C11 SING N N 20 YD7 C13 C12 SING N N 21 YD7 C13 C26 DOUB Y N 22 YD7 C12 C11 SING N N 23 YD7 C17 C26 SING Y N 24 YD7 C17 C18 SING N N 25 YD7 C25 C18 DOUB Y N 26 YD7 C25 C24 SING Y N 27 YD7 C18 N3 SING Y N 28 YD7 C24 N7 DOUB Y N 29 YD7 N3 C19 DOUB Y N 30 YD7 N7 C19 SING Y N 31 YD7 C19 N4 SING N N 32 YD7 N4 C20 SING N N 33 YD7 C21 C20 DOUB Y N 34 YD7 C21 N5 SING Y N 35 YD7 C20 C23 SING Y N 36 YD7 C22 N5 SING N N 37 YD7 N5 N6 SING Y N 38 YD7 C23 N6 DOUB Y N 39 YD7 N1 H1 SING N N 40 YD7 C4 H2 SING N N 41 YD7 C5 H3 SING N N 42 YD7 C5 H4 SING N N 43 YD7 C5 H5 SING N N 44 YD7 C6 H6 SING N N 45 YD7 C6 H7 SING N N 46 YD7 C6 H8 SING N N 47 YD7 C7 H9 SING N N 48 YD7 C7 H10 SING N N 49 YD7 C8 H11 SING N N 50 YD7 C10 H12 SING N N 51 YD7 C10 H13 SING N N 52 YD7 C15 H14 SING N N 53 YD7 C21 H15 SING N N 54 YD7 C22 H16 SING N N 55 YD7 C22 H17 SING N N 56 YD7 C22 H18 SING N N 57 YD7 C24 H19 SING N N 58 YD7 C26 H20 SING N N 59 YD7 C11 H21 SING N N 60 YD7 C11 H22 SING N N 61 YD7 C12 H23 SING N N 62 YD7 C12 H24 SING N N 63 YD7 C16 H25 SING N N 64 YD7 C2 H26 SING N N 65 YD7 C2 H27 SING N N 66 YD7 C23 H28 SING N N 67 YD7 C25 H29 SING N N 68 YD7 C3 H30 SING N N 69 YD7 C9 H31 SING N N 70 YD7 C9 H32 SING N N 71 YD7 N4 H33 SING N N 72 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YD7 InChI InChI 1.03 "InChI=1S/C26H33N7O2/c1-17(2)35-21-15-33(16-21)26(34)31-24-7-5-4-6-18-12-19(8-9-22(18)24)23-10-11-27-25(30-23)29-20-13-28-32(3)14-20/h8-14,17,21,24H,4-7,15-16H2,1-3H3,(H,31,34)(H,27,29,30)/t24-/m1/s1" YD7 InChIKey InChI 1.03 HYNHKNQQFCVJGQ-XMMPIXPASA-N YD7 SMILES_CANONICAL CACTVS 3.385 "CC(C)OC1CN(C1)C(=O)N[C@@H]2CCCCc3cc(ccc23)c4ccnc(Nc5cnn(C)c5)n4" YD7 SMILES CACTVS 3.385 "CC(C)OC1CN(C1)C(=O)N[CH]2CCCCc3cc(ccc23)c4ccnc(Nc5cnn(C)c5)n4" YD7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)OC1CN(C1)C(=O)N[C@@H]2CCCCc3c2ccc(c3)c4ccnc(n4)Nc5cnn(c5)C" YD7 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)OC1CN(C1)C(=O)NC2CCCCc3c2ccc(c3)c4ccnc(n4)Nc5cnn(c5)C" # _pdbx_chem_comp_identifier.comp_id YD7 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(5~{R})-2-[2-[(1-methylpyrazol-4-yl)amino]pyrimidin-4-yl]-6,7,8,9-tetrahydro-5~{H}-benzo[7]annulen-5-yl]-3-propan-2-yloxy-azetidine-1-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YD7 "Create component" 2021-02-22 RCSB YD7 "Initial release" 2022-01-12 RCSB ##