data_YEH # _chem_comp.id YEH _chem_comp.name "[(3aS,3bS,6aS,6bS)-5-(1H-benzotriazole-5-carbonyl)octahydrocyclobuta[1,2-c:3,4-c']dipyrrol-2(1H)-yl](6-chloro-9H-carbazol-2-yl)methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H23 Cl N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-13 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 510.974 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YEH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G4W _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YEH C10 C1 C 0 1 N N N N N N -15.838 13.859 38.631 3.576 -0.206 0.064 C10 YEH 1 YEH C15 C2 C 0 1 N N N N N N -13.164 10.692 43.338 -1.758 -2.905 -0.786 C15 YEH 2 YEH C28 C3 C 0 1 Y N N N N N -12.554 9.299 43.292 -2.930 -2.050 -0.504 C28 YEH 3 YEH N1 N1 N 0 1 N N N N N N -13.391 11.449 42.159 -0.539 -2.350 -0.932 N1 YEH 4 YEH C2 C4 C 0 1 N N N N N N -13.015 10.919 40.786 0.678 -3.069 -1.326 C2 YEH 5 YEH C3 C5 C 0 1 N N S N N N -14.174 11.348 39.904 1.868 -2.180 -0.924 C3 YEH 6 YEH C4 C6 C 0 1 N N R N N N -15.045 12.407 40.688 1.286 -0.746 -0.967 C4 YEH 7 YEH C5 C7 C 0 1 N N N N N N -14.346 12.596 42.066 -0.220 -0.934 -0.723 C5 YEH 8 YEH C6 C8 C 0 1 N N S N N N -13.791 12.431 38.858 2.019 -1.993 0.591 C6 YEH 9 YEH C7 C9 C 0 1 N N R N N N -14.704 13.475 39.612 2.080 -0.470 0.320 C7 YEH 10 YEH C8 C10 C 0 1 N N N N N N -14.332 12.249 37.428 3.417 -2.346 1.126 C8 YEH 11 YEH N9 N2 N 0 1 N N N N N N -15.355 13.355 37.305 4.318 -1.235 0.801 N9 YEH 12 YEH O16 O1 O 0 1 N N N N N N -13.487 11.196 44.408 -1.895 -4.109 -0.886 O16 YEH 13 YEH C29 C11 C 0 1 Y N N N N N -11.507 8.940 42.411 -3.882 -2.459 0.436 C29 YEH 14 YEH C30 C12 C 0 1 Y N N N N N -11.107 7.598 42.299 -4.966 -1.675 0.702 C30 YEH 15 YEH C31 C13 C 0 1 Y N N N N N -13.191 8.349 44.132 -3.079 -0.836 -1.172 C31 YEH 16 YEH C32 C14 C 0 1 Y N N N N N -12.783 7.030 44.017 -4.180 -0.034 -0.905 C32 YEH 17 YEH C33 C15 C 0 1 Y N N N N N -11.771 6.645 43.099 -5.131 -0.461 0.037 C33 YEH 18 YEH N34 N3 N 0 1 Y N N N N N -13.273 5.905 44.674 -4.581 1.194 -1.403 N34 YEH 19 YEH C35 C16 C 0 1 Y N N N N N -12.624 4.799 44.166 -5.769 1.586 -0.814 C35 YEH 20 YEH C36 C17 C 0 1 Y N N N N N -11.683 5.231 43.184 -6.163 0.590 0.093 C36 YEH 21 YEH C37 C18 C 0 1 Y N N N N N -10.895 4.320 42.485 -7.337 0.741 0.829 C37 YEH 22 YEH C38 C19 C 0 1 Y N N N N N -11.103 3.009 42.801 -8.114 1.867 0.655 C38 YEH 23 YEH C39 C20 C 0 1 Y N N N N N -12.024 2.540 43.774 -7.730 2.848 -0.249 C39 YEH 24 YEH C40 C21 C 0 1 Y N N N N N -12.813 3.458 44.484 -6.564 2.717 -0.971 C40 YEH 25 YEH CL41 CL1 CL 0 0 N N N N N N -10.228 1.895 41.884 -9.577 2.058 1.570 CL41 YEH 26 YEH H48 H1 H 0 1 N N N N N N -16.782 13.371 38.914 3.791 -0.282 -1.002 H48 YEH 27 YEH H49 H2 H 0 1 N N N N N N -15.981 14.949 38.606 3.848 0.784 0.430 H49 YEH 28 YEH H43 H3 H 0 1 N N N N N N -12.072 11.365 40.438 0.734 -4.024 -0.803 H43 YEH 29 YEH H42 H4 H 0 1 N N N N N N -12.919 9.823 40.801 0.683 -3.234 -2.403 H42 YEH 30 YEH H12 H5 H 0 1 N N N N N N -14.763 10.517 39.489 2.784 -2.352 -1.491 H12 YEH 31 YEH H11 H6 H 0 1 N N N N N N -16.113 12.150 40.752 1.539 -0.142 -1.839 H11 YEH 32 YEH H44 H7 H 0 1 N N N N N N -15.081 12.558 42.884 -0.787 -0.321 -1.423 H44 YEH 33 YEH H45 H8 H 0 1 N N N N N N -13.808 13.555 42.101 -0.466 -0.649 0.300 H45 YEH 34 YEH H14 H9 H 0 1 N N N N N N -12.725 12.701 38.888 1.183 -2.344 1.197 H14 YEH 35 YEH H13 H10 H 0 1 N N N N N N -14.146 14.337 40.006 1.608 0.191 1.047 H13 YEH 36 YEH H47 H11 H 0 1 N N N N N N -13.530 12.368 36.684 3.374 -2.482 2.207 H47 YEH 37 YEH H46 H12 H 0 1 N N N N N N -14.801 11.262 37.306 3.773 -3.261 0.653 H46 YEH 38 YEH H54 H15 H 0 1 N N N N N N -11.014 9.700 41.823 -3.757 -3.400 0.953 H54 YEH 39 YEH H55 H16 H 0 1 N N N N N N -10.317 7.306 41.623 -5.698 -1.996 1.429 H55 YEH 40 YEH H56 H17 H 0 1 N N N N N N -13.961 8.642 44.831 -2.341 -0.520 -1.894 H56 YEH 41 YEH H57 H18 H 0 1 N N N N N N -13.973 5.900 45.389 -4.097 1.706 -2.070 H57 YEH 42 YEH H58 H19 H 0 1 N N N N N N -10.171 4.629 41.746 -7.637 -0.021 1.533 H58 YEH 43 YEH H59 H20 H 0 1 N N N N N N -12.117 1.481 43.967 -8.344 3.726 -0.378 H59 YEH 44 YEH H60 H21 H 0 1 N N N N N N -13.524 3.142 45.233 -6.272 3.489 -1.669 H60 YEH 45 YEH C1 C22 C 0 1 N N N N N N ? ? ? 5.624 -1.171 1.127 C1 YEH 46 YEH O1 O2 O 0 1 N N N N N N ? ? ? 6.163 -2.117 1.668 O1 YEH 47 YEH C11 C23 C 0 1 Y N N N N N ? ? ? 6.401 0.049 0.828 C11 YEH 48 YEH C12 C24 C 0 1 Y N N N N N ? ? ? 7.433 0.448 1.689 C12 YEH 49 YEH C13 C25 C 0 1 Y N N N N N ? ? ? 8.158 1.572 1.424 C13 YEH 50 YEH C9 C26 C 0 1 Y N N N N N ? ? ? 7.877 2.335 0.293 C9 YEH 51 YEH C14 C27 C 0 1 Y N N N N N ? ? ? 6.845 1.950 -0.582 C14 YEH 52 YEH C17 C28 C 0 1 Y N N N N N ? ? ? 6.109 0.794 -0.308 C17 YEH 53 YEH N3 N4 N 0 1 Y N N N N N ? ? ? 6.794 2.862 -1.582 N3 YEH 54 YEH N4 N5 N 0 1 Y N N N N N ? ? ? 7.694 3.765 -1.403 N4 YEH 55 YEH N5 N6 N 0 1 Y N N N N N ? ? ? 8.412 3.485 -0.232 N5 YEH 56 YEH H1 H22 H 0 1 N N N N N N ? ? ? 7.656 -0.139 2.568 H1 YEH 57 YEH H2 H23 H 0 1 N N N N N N ? ? ? 8.951 1.872 2.093 H2 YEH 58 YEH H3 H24 H 0 1 N N N N N N ? ? ? 5.314 0.486 -0.970 H3 YEH 59 YEH H4 H25 H 0 1 N N N N N N ? ? ? 9.144 4.004 0.136 H4 YEH 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YEH N1 C2 SING N N 1 YEH N1 C5 SING N N 2 YEH N1 C15 SING N N 3 YEH C2 C3 SING N N 4 YEH C3 C4 SING N N 5 YEH C3 C6 SING N N 6 YEH C4 C5 SING N N 7 YEH C4 C7 SING N N 8 YEH C6 C7 SING N N 9 YEH C6 C8 SING N N 10 YEH C7 C10 SING N N 11 YEH C8 N9 SING N N 12 YEH N9 C10 SING N N 13 YEH C15 O16 DOUB N N 14 YEH C15 C28 SING N N 15 YEH C28 C29 DOUB Y N 16 YEH C28 C31 SING Y N 17 YEH C29 C30 SING Y N 18 YEH C30 C33 DOUB Y N 19 YEH C31 C32 DOUB Y N 20 YEH C32 C33 SING Y N 21 YEH C32 N34 SING Y N 22 YEH C33 C36 SING Y N 23 YEH N34 C35 SING Y N 24 YEH C35 C36 DOUB Y N 25 YEH C35 C40 SING Y N 26 YEH C36 C37 SING Y N 27 YEH C37 C38 DOUB Y N 28 YEH C38 C39 SING Y N 29 YEH C38 CL41 SING N N 30 YEH C39 C40 DOUB Y N 31 YEH C10 H48 SING N N 32 YEH C10 H49 SING N N 33 YEH C2 H43 SING N N 34 YEH C2 H42 SING N N 35 YEH C3 H12 SING N N 36 YEH C4 H11 SING N N 37 YEH C5 H44 SING N N 38 YEH C5 H45 SING N N 39 YEH C6 H14 SING N N 40 YEH C7 H13 SING N N 41 YEH C8 H47 SING N N 42 YEH C8 H46 SING N N 43 YEH C29 H54 SING N N 44 YEH C30 H55 SING N N 45 YEH C31 H56 SING N N 46 YEH N34 H57 SING N N 47 YEH C37 H58 SING N N 48 YEH C39 H59 SING N N 49 YEH C40 H60 SING N N 50 YEH N9 C1 SING N N 51 YEH C1 O1 DOUB N N 52 YEH C1 C11 SING N N 53 YEH C11 C12 DOUB Y N 54 YEH C12 C13 SING Y N 55 YEH C13 C9 DOUB Y N 56 YEH C9 C14 SING Y N 57 YEH C14 C17 DOUB Y N 58 YEH C17 C11 SING Y N 59 YEH C14 N3 SING Y N 60 YEH N3 N4 DOUB Y N 61 YEH N4 N5 SING Y N 62 YEH N5 C9 SING Y N 63 YEH C12 H1 SING N N 64 YEH C13 H2 SING N N 65 YEH C17 H3 SING N N 66 YEH N5 H4 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YEH SMILES ACDLabs 12.01 "Clc1cc2c3ccc(cc3[NH]c2cc1)C(=O)N1CC2C(C1)C1CN(CC21)C(=O)c1cc2nn[NH]c2cc1" YEH InChI InChI 1.06 "InChI=1S/C28H23ClN6O2/c29-16-3-6-23-18(9-16)17-4-1-14(7-25(17)30-23)27(36)34-10-19-20(11-34)22-13-35(12-21(19)22)28(37)15-2-5-24-26(8-15)32-33-31-24/h1-9,19-22,30H,10-13H2,(H,31,32,33)/t19-,20+,21+,22?/m0/s1" YEH InChIKey InChI 1.06 UCSZLTVMEILRKY-DJQAVYROSA-N YEH SMILES_CANONICAL CACTVS 3.385 "Clc1ccc2[nH]c3cc(ccc3c2c1)C(=O)N4C[C@H]5[C@@H](C4)[C@@H]6CN(C[C@H]56)C(=O)c7ccc8[nH]nnc8c7" YEH SMILES CACTVS 3.385 "Clc1ccc2[nH]c3cc(ccc3c2c1)C(=O)N4C[CH]5[CH](C4)[CH]6CN(C[CH]56)C(=O)c7ccc8[nH]nnc8c7" YEH SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c3cc(ccc3[nH]c2cc1C(=O)N4C[C@@H]5[C@H](C4)[C@@H]6[C@H]5CN(C6)C(=O)c7ccc8c(c7)nn[nH]8)Cl" YEH SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2c3cc(ccc3[nH]c2cc1C(=O)N4CC5C(C4)C6C5CN(C6)C(=O)c7ccc8c(c7)nn[nH]8)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YEH "SYSTEMATIC NAME" ACDLabs 12.01 "[(3aS,3bS,6aS,6bS)-5-(1H-benzotriazole-5-carbonyl)octahydrocyclobuta[1,2-c:3,4-c']dipyrrol-2(1H)-yl](6-chloro-9H-carbazol-2-yl)methanone" YEH "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(1~{S},2~{S},6~{R},7~{R})-9-(1~{H}-benzotriazol-5-ylcarbonyl)-4,9-diazatricyclo[5.3.0.0^{2,6}]decan-4-yl]-(6-chloranyl-9~{H}-carbazol-2-yl)methanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YEH "Create component" 2023-06-13 RCSB YEH "Initial release" 2024-12-18 RCSB #