data_YF6 # _chem_comp.id YF6 _chem_comp.name "N-(1-[1,1-di(pyridin-2-yl)ethyl]-6-{1-methyl-6-oxo-5-[(piperidin-4-yl)amino]-1,6-dihydropyridin-3-yl}-1H-indol-4-yl)ethanesulfonamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H37 N7 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-07-30 _chem_comp.pdbx_modified_date 2021-08-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 611.757 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YF6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7JKY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YF6 C1 C1 C 0 1 Y N N 13.018 14.845 5.499 0.498 1.808 0.171 C1 YF6 1 YF6 C2 C2 C 0 1 Y N N 14.196 15.590 5.669 -0.404 2.481 0.972 C2 YF6 2 YF6 C3 C3 C 0 1 Y N N 14.986 15.857 4.531 -1.651 1.903 1.252 C3 YF6 3 YF6 C4 C4 C 0 1 Y N N 14.573 15.362 3.283 -1.980 0.644 0.720 C4 YF6 4 YF6 C5 C5 C 0 1 Y N N 13.390 14.650 3.108 -1.063 -0.023 -0.084 C5 YF6 5 YF6 C6 C6 C 0 1 Y N N 12.609 14.405 4.240 0.168 0.558 -0.362 C6 YF6 6 YF6 C7 C7 C 0 1 N N N 11.265 13.804 4.037 1.143 -0.156 -1.222 C7 YF6 7 YF6 C8 C8 C 0 1 N N N 10.468 14.316 2.982 2.371 -0.599 -0.683 C8 YF6 8 YF6 C9 C9 C 0 1 N N N 9.201 13.809 2.732 3.254 -1.255 -1.491 C9 YF6 9 YF6 C10 C10 C 0 1 N N N 8.659 12.771 3.560 2.919 -1.476 -2.846 C10 YF6 10 YF6 N1 N1 N 0 1 N N N 9.494 12.316 4.585 1.741 -1.042 -3.332 N1 YF6 11 YF6 C11 C11 C 0 1 N N N 10.751 12.847 4.844 0.854 -0.394 -2.533 C11 YF6 12 YF6 N2 N2 N 0 1 N N N 8.389 14.315 1.727 4.480 -1.704 -0.983 N2 YF6 13 YF6 C12 C12 C 0 1 N N N 8.927 15.027 0.590 4.780 -1.556 0.443 C12 YF6 14 YF6 C13 C13 C 0 1 N N N 7.838 15.697 -0.236 6.296 -1.476 0.641 C13 YF6 15 YF6 C14 C14 C 0 1 N N N 8.427 16.465 -1.402 6.606 -1.383 2.136 C14 YF6 16 YF6 N3 N3 N 0 1 N N N 9.256 15.608 -2.242 6.066 -2.562 2.824 N3 YF6 17 YF6 C15 C15 C 0 1 N N N 10.395 15.050 -1.476 4.606 -2.634 2.688 C15 YF6 18 YF6 C16 C16 C 0 1 N N N 9.868 14.216 -0.303 4.235 -2.764 1.209 C16 YF6 19 YF6 C17 C17 C 0 1 N N N 9.027 11.224 5.442 1.408 -1.279 -4.739 C17 YF6 20 YF6 O1 O1 O 0 1 N N N 7.547 12.225 3.375 3.701 -2.061 -3.579 O1 YF6 21 YF6 C18 C18 C 0 1 Y N N 16.195 16.619 4.330 -2.811 2.326 2.040 C18 YF6 22 YF6 C19 C19 C 0 1 Y N N 16.487 16.536 3.018 -3.728 1.351 1.945 C19 YF6 23 YF6 N4 N4 N 0 1 Y N N 15.527 15.787 2.350 -3.249 0.336 1.159 N4 YF6 24 YF6 N5 N5 N 0 1 N N N 14.639 16.098 6.900 -0.076 3.731 1.500 N5 YF6 25 YF6 S1 S1 S 0 1 N N N 13.745 16.329 8.216 0.852 4.784 0.621 S1 YF6 26 YF6 C20 C20 C 0 1 N N N 13.584 14.777 9.028 -0.108 5.081 -0.890 C20 YF6 27 YF6 C21 C21 C 0 1 N N N 14.944 14.235 9.461 0.653 6.050 -1.796 C21 YF6 28 YF6 O2 O2 O 0 1 N N N 12.409 16.757 7.867 0.902 5.958 1.419 O2 YF6 29 YF6 O3 O3 O 0 1 N N N 14.503 17.209 9.050 2.032 4.049 0.325 O3 YF6 30 YF6 C22 C22 C 0 1 N N N 15.414 15.655 0.898 -3.978 -0.893 0.834 C22 YF6 31 YF6 C23 C23 C 0 1 N N N 16.828 15.859 0.274 -5.386 -0.822 1.427 C23 YF6 32 YF6 C24 C24 C 0 1 Y N N 14.971 14.253 0.476 -4.069 -1.041 -0.663 C24 YF6 33 YF6 C25 C25 C 0 1 Y N N 14.365 16.638 0.291 -3.248 -2.078 1.413 C25 YF6 34 YF6 N6 N6 N 0 1 Y N N 15.515 13.161 1.040 -3.786 -0.014 -1.438 N6 YF6 35 YF6 C26 C26 C 0 1 Y N N 15.119 11.937 0.625 -3.852 -0.098 -2.753 C26 YF6 36 YF6 C27 C27 C 0 1 Y N N 14.183 11.802 -0.382 -4.225 -1.278 -3.368 C27 YF6 37 YF6 C28 C28 C 0 1 Y N N 13.712 12.955 -0.973 -4.531 -2.380 -2.585 C28 YF6 38 YF6 C29 C29 C 0 1 Y N N 14.103 14.185 -0.544 -4.444 -2.256 -1.207 C29 YF6 39 YF6 C30 C30 C 0 1 Y N N 14.242 16.788 -1.085 -3.890 -3.298 1.503 C30 YF6 40 YF6 C31 C31 C 0 1 Y N N 13.305 17.669 -1.606 -3.210 -4.382 2.037 C31 YF6 41 YF6 C32 C32 C 0 1 Y N N 12.463 18.343 -0.775 -1.903 -4.196 2.463 C32 YF6 42 YF6 C33 C33 C 0 1 Y N N 12.554 18.095 0.565 -1.327 -2.946 2.341 C33 YF6 43 YF6 N7 N7 N 0 1 Y N N 13.455 17.220 1.089 -2.002 -1.939 1.823 N7 YF6 44 YF6 H1 H1 H 0 1 N N N 12.415 14.607 6.363 1.459 2.250 -0.048 H1 YF6 45 YF6 H2 H2 H 0 1 N N N 13.087 14.300 2.132 -1.309 -0.990 -0.497 H2 YF6 46 YF6 H3 H3 H 0 1 N N N 10.853 15.113 2.363 2.609 -0.421 0.356 H3 YF6 47 YF6 H4 H4 H 0 1 N N N 11.320 12.495 5.692 -0.088 -0.058 -2.942 H4 YF6 48 YF6 H5 H5 H 0 1 N N N 7.751 14.942 2.173 5.129 -2.114 -1.576 H5 YF6 49 YF6 H6 H6 H 0 1 N N N 9.538 15.847 0.995 4.315 -0.645 0.820 H6 YF6 50 YF6 H7 H7 H 0 1 N N N 7.278 16.393 0.406 6.765 -2.369 0.227 H7 YF6 51 YF6 H8 H8 H 0 1 N N N 7.156 14.926 -0.623 6.684 -0.594 0.132 H8 YF6 52 YF6 H9 H9 H 0 1 N N N 9.044 17.288 -1.013 7.686 -1.340 2.282 H9 YF6 53 YF6 H10 H10 H 0 1 N N N 7.608 16.876 -2.010 6.149 -0.482 2.546 H10 YF6 54 YF6 H11 H11 H 0 1 N N N 9.609 16.145 -3.008 6.339 -2.572 3.796 H11 YF6 55 YF6 H13 H13 H 0 1 N N N 11.002 14.412 -2.135 4.232 -3.500 3.234 H13 YF6 56 YF6 H14 H14 H 0 1 N N N 11.015 15.873 -1.090 4.158 -1.728 3.095 H14 YF6 57 YF6 H15 H15 H 0 1 N N N 9.322 13.347 -0.700 3.150 -2.802 1.108 H15 YF6 58 YF6 H16 H16 H 0 1 N N N 10.721 13.869 0.299 4.670 -3.678 0.803 H16 YF6 59 YF6 H17 H17 H 0 1 N N N 9.798 10.990 6.191 2.227 -1.812 -5.221 H17 YF6 60 YF6 H18 H18 H 0 1 N N N 8.101 11.529 5.952 0.499 -1.876 -4.801 H18 YF6 61 YF6 H19 H19 H 0 1 N N N 8.831 10.333 4.827 1.250 -0.324 -5.240 H19 YF6 62 YF6 H20 H20 H 0 1 N N N 16.756 17.151 5.084 -2.909 3.249 2.593 H20 YF6 63 YF6 H21 H21 H 0 1 N N N 17.348 16.989 2.550 -4.699 1.365 2.417 H21 YF6 64 YF6 H22 H22 H 0 1 N N N 15.371 15.480 7.188 -0.391 3.983 2.382 H22 YF6 65 YF6 H23 H23 H 0 1 N N N 12.948 14.902 9.917 -0.261 4.137 -1.414 H23 YF6 66 YF6 H24 H24 H 0 1 N N N 13.115 14.059 8.339 -1.074 5.511 -0.627 H24 YF6 67 YF6 H25 H25 H 0 1 N N N 14.810 13.266 9.964 0.807 6.993 -1.271 H25 YF6 68 YF6 H26 H26 H 0 1 N N N 15.584 14.103 8.576 1.620 5.619 -2.058 H26 YF6 69 YF6 H27 H27 H 0 1 N N N 15.418 14.946 10.154 0.076 6.229 -2.703 H27 YF6 70 YF6 H28 H28 H 0 1 N N N 17.535 15.149 0.728 -5.914 0.035 1.009 H28 YF6 71 YF6 H29 H29 H 0 1 N N N 16.779 15.684 -0.811 -5.928 -1.737 1.186 H29 YF6 72 YF6 H30 H30 H 0 1 N N N 17.168 16.888 0.465 -5.320 -0.715 2.510 H30 YF6 73 YF6 H31 H31 H 0 1 N N N 15.539 11.055 1.086 -3.612 0.766 -3.355 H31 YF6 74 YF6 H32 H32 H 0 1 N N N 13.833 10.829 -0.695 -4.278 -1.340 -4.444 H32 YF6 75 YF6 H33 H33 H 0 1 N N N 13.016 12.880 -1.796 -4.821 -3.317 -3.038 H33 YF6 76 YF6 H34 H34 H 0 1 N N N 13.725 15.082 -1.012 -4.675 -3.094 -0.566 H34 YF6 77 YF6 H35 H35 H 0 1 N N N 14.876 16.219 -1.749 -4.909 -3.407 1.161 H35 YF6 78 YF6 H36 H36 H 0 1 N N N 13.243 17.820 -2.674 -3.686 -5.347 2.119 H36 YF6 79 YF6 H37 H37 H 0 1 N N N 11.746 19.051 -1.163 -1.343 -5.018 2.884 H37 YF6 80 YF6 H38 H38 H 0 1 N N N 11.885 18.614 1.235 -0.310 -2.793 2.671 H38 YF6 81 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YF6 N3 C15 SING N N 1 YF6 N3 C14 SING N N 2 YF6 C31 C30 DOUB Y N 3 YF6 C31 C32 SING Y N 4 YF6 C15 C16 SING N N 5 YF6 C14 C13 SING N N 6 YF6 C30 C25 SING Y N 7 YF6 C28 C29 DOUB Y N 8 YF6 C28 C27 SING Y N 9 YF6 C32 C33 DOUB Y N 10 YF6 C29 C24 SING Y N 11 YF6 C27 C26 DOUB Y N 12 YF6 C16 C12 SING N N 13 YF6 C13 C12 SING N N 14 YF6 C23 C22 SING N N 15 YF6 C25 C22 SING N N 16 YF6 C25 N7 DOUB Y N 17 YF6 C24 C22 SING N N 18 YF6 C24 N6 DOUB Y N 19 YF6 C33 N7 SING Y N 20 YF6 C12 N2 SING N N 21 YF6 C26 N6 SING Y N 22 YF6 C22 N4 SING N N 23 YF6 N2 C9 SING N N 24 YF6 N4 C19 SING Y N 25 YF6 N4 C4 SING Y N 26 YF6 C9 C8 DOUB N N 27 YF6 C9 C10 SING N N 28 YF6 C8 C7 SING N N 29 YF6 C19 C18 DOUB Y N 30 YF6 C5 C4 DOUB Y N 31 YF6 C5 C6 SING Y N 32 YF6 C4 C3 SING Y N 33 YF6 O1 C10 DOUB N N 34 YF6 C10 N1 SING N N 35 YF6 C7 C6 SING N N 36 YF6 C7 C11 DOUB N N 37 YF6 C6 C1 DOUB Y N 38 YF6 C18 C3 SING Y N 39 YF6 C3 C2 DOUB Y N 40 YF6 N1 C11 SING N N 41 YF6 N1 C17 SING N N 42 YF6 C1 C2 SING Y N 43 YF6 C2 N5 SING N N 44 YF6 N5 S1 SING N N 45 YF6 O2 S1 DOUB N N 46 YF6 S1 C20 SING N N 47 YF6 S1 O3 DOUB N N 48 YF6 C20 C21 SING N N 49 YF6 C1 H1 SING N N 50 YF6 C5 H2 SING N N 51 YF6 C8 H3 SING N N 52 YF6 C11 H4 SING N N 53 YF6 N2 H5 SING N N 54 YF6 C12 H6 SING N N 55 YF6 C13 H7 SING N N 56 YF6 C13 H8 SING N N 57 YF6 C14 H9 SING N N 58 YF6 C14 H10 SING N N 59 YF6 N3 H11 SING N N 60 YF6 C15 H13 SING N N 61 YF6 C15 H14 SING N N 62 YF6 C16 H15 SING N N 63 YF6 C16 H16 SING N N 64 YF6 C17 H17 SING N N 65 YF6 C17 H18 SING N N 66 YF6 C17 H19 SING N N 67 YF6 C18 H20 SING N N 68 YF6 C19 H21 SING N N 69 YF6 N5 H22 SING N N 70 YF6 C20 H23 SING N N 71 YF6 C20 H24 SING N N 72 YF6 C21 H25 SING N N 73 YF6 C21 H26 SING N N 74 YF6 C21 H27 SING N N 75 YF6 C23 H28 SING N N 76 YF6 C23 H29 SING N N 77 YF6 C23 H30 SING N N 78 YF6 C26 H31 SING N N 79 YF6 C27 H32 SING N N 80 YF6 C28 H33 SING N N 81 YF6 C29 H34 SING N N 82 YF6 C30 H35 SING N N 83 YF6 C31 H36 SING N N 84 YF6 C32 H37 SING N N 85 YF6 C33 H38 SING N N 86 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YF6 SMILES ACDLabs 12.01 "c1c(NS(CC)(=O)=O)c4c(cc1C2=CN(C(C(=C2)NC3CCNCC3)=O)C)n(cc4)C(C)(c5ncccc5)c6ncccc6" YF6 InChI InChI 1.03 "InChI=1S/C33H37N7O3S/c1-4-44(42,43)38-27-19-23(24-20-28(32(41)39(3)22-24)37-25-11-16-34-17-12-25)21-29-26(27)13-18-40(29)33(2,30-9-5-7-14-35-30)31-10-6-8-15-36-31/h5-10,13-15,18-22,25,34,37-38H,4,11-12,16-17H2,1-3H3" YF6 InChIKey InChI 1.03 RDWRDUFEWMSPGQ-UHFFFAOYSA-N YF6 SMILES_CANONICAL CACTVS 3.385 "CC[S](=O)(=O)Nc1cc(cc2n(ccc12)C(C)(c3ccccn3)c4ccccn4)C5=CN(C)C(=O)C(=C5)NC6CCNCC6" YF6 SMILES CACTVS 3.385 "CC[S](=O)(=O)Nc1cc(cc2n(ccc12)C(C)(c3ccccn3)c4ccccn4)C5=CN(C)C(=O)C(=C5)NC6CCNCC6" YF6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCS(=O)(=O)Nc1cc(cc2c1ccn2C(C)(c3ccccn3)c4ccccn4)C5=CN(C(=O)C(=C5)NC6CCNCC6)C" YF6 SMILES "OpenEye OEToolkits" 2.0.7 "CCS(=O)(=O)Nc1cc(cc2c1ccn2C(C)(c3ccccn3)c4ccccn4)C5=CN(C(=O)C(=C5)NC6CCNCC6)C" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YF6 "SYSTEMATIC NAME" ACDLabs 12.01 "N-(1-[1,1-di(pyridin-2-yl)ethyl]-6-{1-methyl-6-oxo-5-[(piperidin-4-yl)amino]-1,6-dihydropyridin-3-yl}-1H-indol-4-yl)ethanesulfonamide" YF6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[1-(1,1-dipyridin-2-ylethyl)-6-[1-methyl-6-oxidanylidene-5-(piperidin-4-ylamino)pyridin-3-yl]indol-4-yl]ethanesulfonamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YF6 "Create component" 2020-07-30 RCSB YF6 "Initial release" 2021-08-25 RCSB ##