data_YFB # _chem_comp.id YFB _chem_comp.name "AMORFRUTIN B" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H32 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-10-20 _chem_comp.pdbx_modified_date 2014-09-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 408.530 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YFB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4A4W _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YFB CAB CAB C 0 1 N N N -37.822 -12.215 -42.146 -3.387 3.615 0.743 CAB YFB 1 YFB CAV CAV C 0 1 N N N -38.901 -11.152 -42.101 -4.888 3.592 0.615 CAV YFB 2 YFB CAC CAC C 0 1 N N N -40.327 -11.595 -41.742 -5.702 4.773 1.078 CAC YFB 3 YFB CAH CAH C 0 1 N N N -38.544 -9.818 -42.356 -5.486 2.546 0.102 CAH YFB 4 YFB CAP CAP C 0 1 N N N -39.325 -8.652 -42.362 -4.673 1.364 -0.360 CAP YFB 5 YFB CAR CAR C 0 1 N N N -38.692 -7.467 -43.137 -5.176 0.096 0.332 CAR YFB 6 YFB CAW CAW C 0 1 N N N -37.297 -7.014 -42.619 -4.362 -1.085 -0.131 CAW YFB 7 YFB CAD CAD C 0 1 N N N -36.682 -5.718 -43.144 -4.734 -1.805 -1.401 CAD YFB 8 YFB CAI CAI C 0 1 N N N -36.545 -7.781 -41.721 -3.332 -1.486 0.572 CAI YFB 9 YFB CAQ CAQ C 0 1 N N N -35.270 -7.521 -41.199 -2.444 -2.585 0.047 CAQ YFB 10 YFB CBC CBC C 0 1 Y N N -34.978 -8.545 -40.088 -1.013 -2.115 0.040 CBC YFB 11 YFB CBB CBB C 0 1 Y N N -34.859 -8.144 -38.743 -0.211 -2.316 1.154 CBB YFB 12 YFB CAO CAO C 0 1 Y N N -34.615 -9.088 -37.758 1.112 -1.883 1.155 CAO YFB 13 YFB OAU OAU O 0 1 N N N -34.988 -6.822 -38.347 -0.719 -2.937 2.249 OAU YFB 14 YFB CAA CAA C 0 1 N N N -34.820 -6.669 -36.863 0.160 -3.112 3.362 CAA YFB 15 YFB CAZ CAZ C 0 1 Y N N -34.819 -9.911 -40.383 -0.497 -1.487 -1.080 CAZ YFB 16 YFB OAG OAG O 0 1 N N N -34.920 -10.400 -41.670 -1.278 -1.294 -2.172 OAG YFB 17 YFB CBD CBD C 0 1 Y N N -34.569 -10.844 -39.381 0.838 -1.050 -1.082 CBD YFB 18 YFB CAX CAX C 0 1 N N N -34.431 -12.308 -39.837 1.395 -0.382 -2.268 CAX YFB 19 YFB OAF OAF O 0 1 N N N -34.642 -12.588 -41.053 1.988 -1.110 -3.235 OAF YFB 20 YFB OAE OAE O 0 1 N N N -34.140 -13.159 -38.980 1.321 0.826 -2.376 OAE YFB 21 YFB CBA CBA C 0 1 Y N N -34.455 -10.431 -38.038 1.635 -1.253 0.050 CBA YFB 22 YFB CAT CAT C 0 1 N N N -34.164 -11.312 -36.819 3.067 -0.785 0.056 CAT YFB 23 YFB CAS CAS C 0 1 N N N -32.640 -11.611 -36.791 3.122 0.687 0.469 CAS YFB 24 YFB CAY CAY C 0 1 Y N N -32.366 -12.790 -35.868 4.555 1.154 0.476 CAY YFB 25 YFB CAM CAM C 0 1 Y N N -32.350 -12.601 -34.495 5.111 1.694 -0.669 CAM YFB 26 YFB CAK CAK C 0 1 Y N N -32.099 -13.680 -33.653 6.425 2.122 -0.663 CAK YFB 27 YFB CAJ CAJ C 0 1 Y N N -31.885 -14.953 -34.211 7.183 2.011 0.488 CAJ YFB 28 YFB CAL CAL C 0 1 Y N N -31.888 -15.148 -35.595 6.627 1.472 1.633 CAL YFB 29 YFB CAN CAN C 0 1 Y N N -32.130 -14.050 -36.426 5.311 1.048 1.628 CAN YFB 30 YFB HAB1 HAB1 H 0 0 N N N -36.861 -11.752 -42.415 -3.074 4.559 1.188 HAB1 YFB 31 YFB HAB2 HAB2 H 0 0 N N N -37.736 -12.692 -41.158 -3.064 2.789 1.378 HAB2 YFB 32 YFB HAB3 HAB3 H 0 0 N N N -38.086 -12.974 -42.898 -2.937 3.512 -0.244 HAB3 YFB 33 YFB HAC1 HAC1 H 0 0 N N N -40.996 -10.722 -41.749 -5.824 5.475 0.253 HAC1 YFB 34 YFB HAC2 HAC2 H 0 0 N N N -40.679 -12.332 -42.479 -6.681 4.431 1.413 HAC2 YFB 35 YFB HAC3 HAC3 H 0 0 N N N -40.328 -12.050 -40.740 -5.188 5.268 1.903 HAC3 YFB 36 YFB HAH HAH H 0 1 N N N -37.500 -9.665 -42.584 -6.562 2.529 0.011 HAH YFB 37 YFB HAP1 HAP1 H 0 0 N N N -40.294 -8.888 -42.825 -4.774 1.254 -1.440 HAP1 YFB 38 YFB HAP2 HAP2 H 0 0 N N N -39.483 -8.337 -41.320 -3.624 1.524 -0.109 HAP2 YFB 39 YFB HAR1 HAR1 H 0 0 N N N -38.584 -7.766 -44.190 -5.074 0.207 1.412 HAR1 YFB 40 YFB HAR2 HAR2 H 0 0 N N N -39.377 -6.609 -43.068 -6.224 -0.064 0.080 HAR2 YFB 41 YFB HAD1 HAD1 H 0 0 N N N -35.702 -5.559 -42.671 -5.662 -1.390 -1.796 HAD1 YFB 42 YFB HAD2 HAD2 H 0 0 N N N -36.556 -5.788 -44.234 -3.939 -1.680 -2.136 HAD2 YFB 43 YFB HAD3 HAD3 H 0 0 N N N -37.346 -4.874 -42.905 -4.871 -2.866 -1.191 HAD3 YFB 44 YFB HAI HAI H 0 1 N N N -37.010 -8.696 -41.385 -3.118 -1.029 1.527 HAI YFB 45 YFB HAQ1 HAQ1 H 0 0 N N N -34.517 -7.613 -41.996 -2.535 -3.463 0.688 HAQ1 YFB 46 YFB HAQ2 HAQ2 H 0 0 N N N -35.240 -6.503 -40.783 -2.747 -2.844 -0.967 HAQ2 YFB 47 YFB HAO HAO H 0 1 N N N -34.547 -8.761 -36.731 1.730 -2.043 2.026 HAO YFB 48 YFB HAA1 HAA1 H 0 0 N N N -34.929 -5.609 -36.588 1.017 -3.712 3.056 HAA1 YFB 49 YFB HAA2 HAA2 H 0 0 N N N -35.587 -7.263 -36.344 0.503 -2.138 3.711 HAA2 YFB 50 YFB HAA3 HAA3 H 0 0 N N N -33.821 -7.023 -36.569 -0.371 -3.620 4.167 HAA3 YFB 51 YFB HAG HAG H 0 1 N N N -34.783 -11.340 -41.664 -1.759 -0.455 -2.168 HAG YFB 52 YFB HAF HAF H 0 1 N N N -34.542 -13.523 -41.185 2.339 -0.627 -3.996 HAF YFB 53 YFB HAT1 HAT1 H 0 0 N N N -34.457 -10.784 -35.899 3.641 -1.383 0.765 HAT1 YFB 54 YFB HAT2 HAT2 H 0 0 N N N -34.727 -12.254 -36.897 3.491 -0.899 -0.942 HAT2 YFB 55 YFB HAS1 HAS1 H 0 0 N N N -32.296 -11.854 -37.807 2.548 1.284 -0.239 HAS1 YFB 56 YFB HAS2 HAS2 H 0 0 N N N -32.100 -10.726 -36.424 2.698 0.800 1.467 HAS2 YFB 57 YFB HAM HAM H 0 1 N N N -32.532 -11.620 -34.080 4.518 1.781 -1.568 HAM YFB 58 YFB HAN HAN H 0 1 N N N -32.135 -14.175 -37.499 4.875 0.630 2.523 HAN YFB 59 YFB HAK HAK H 0 1 N N N -32.069 -13.541 -32.582 6.859 2.544 -1.557 HAK YFB 60 YFB HAJ HAJ H 0 1 N N N -31.715 -15.796 -33.558 8.210 2.346 0.492 HAJ YFB 61 YFB HAL HAL H 0 1 N N N -31.707 -16.127 -36.014 7.219 1.385 2.531 HAL YFB 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YFB CAB CAV SING N N 1 YFB CAV CAC SING N N 2 YFB CAV CAH DOUB N N 3 YFB CAH CAP SING N N 4 YFB CAP CAR SING N N 5 YFB CAR CAW SING N N 6 YFB CAW CAD SING N N 7 YFB CAW CAI DOUB N E 8 YFB CAI CAQ SING N N 9 YFB CAQ CBC SING N N 10 YFB CBC CBB SING Y N 11 YFB CBC CAZ DOUB Y N 12 YFB CBB CAO DOUB Y N 13 YFB CBB OAU SING N N 14 YFB CAO CBA SING Y N 15 YFB OAU CAA SING N N 16 YFB CAZ OAG SING N N 17 YFB CAZ CBD SING Y N 18 YFB CBD CAX SING N N 19 YFB CBD CBA DOUB Y N 20 YFB CAX OAF SING N N 21 YFB CAX OAE DOUB N N 22 YFB CBA CAT SING N N 23 YFB CAT CAS SING N N 24 YFB CAS CAY SING N N 25 YFB CAY CAM SING Y N 26 YFB CAY CAN DOUB Y N 27 YFB CAM CAK DOUB Y N 28 YFB CAK CAJ SING Y N 29 YFB CAJ CAL DOUB Y N 30 YFB CAL CAN SING Y N 31 YFB CAB HAB1 SING N N 32 YFB CAB HAB2 SING N N 33 YFB CAB HAB3 SING N N 34 YFB CAC HAC1 SING N N 35 YFB CAC HAC2 SING N N 36 YFB CAC HAC3 SING N N 37 YFB CAH HAH SING N N 38 YFB CAP HAP1 SING N N 39 YFB CAP HAP2 SING N N 40 YFB CAR HAR1 SING N N 41 YFB CAR HAR2 SING N N 42 YFB CAD HAD1 SING N N 43 YFB CAD HAD2 SING N N 44 YFB CAD HAD3 SING N N 45 YFB CAI HAI SING N N 46 YFB CAQ HAQ1 SING N N 47 YFB CAQ HAQ2 SING N N 48 YFB CAO HAO SING N N 49 YFB CAA HAA1 SING N N 50 YFB CAA HAA2 SING N N 51 YFB CAA HAA3 SING N N 52 YFB OAG HAG SING N N 53 YFB OAF HAF SING N N 54 YFB CAT HAT1 SING N N 55 YFB CAT HAT2 SING N N 56 YFB CAS HAS1 SING N N 57 YFB CAS HAS2 SING N N 58 YFB CAM HAM SING N N 59 YFB CAN HAN SING N N 60 YFB CAK HAK SING N N 61 YFB CAJ HAJ SING N N 62 YFB CAL HAL SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YFB SMILES ACDLabs 12.01 "O=C(O)c1c(cc(OC)c(c1O)C/C=C(\C)CC\C=C(/C)C)CCc2ccccc2" YFB InChI InChI 1.03 "InChI=1S/C26H32O4/c1-18(2)9-8-10-19(3)13-16-22-23(30-4)17-21(24(25(22)27)26(28)29)15-14-20-11-6-5-7-12-20/h5-7,9,11-13,17,27H,8,10,14-16H2,1-4H3,(H,28,29)/b19-13+" YFB InChIKey InChI 1.03 DKNIJLWIVUCTHW-CPNJWEJPSA-N YFB SMILES_CANONICAL CACTVS 3.385 "COc1cc(CCc2ccccc2)c(C(O)=O)c(O)c1C/C=C(C)/CCC=C(C)C" YFB SMILES CACTVS 3.385 "COc1cc(CCc2ccccc2)c(C(O)=O)c(O)c1CC=C(C)CCC=C(C)C" YFB SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CC(=CCC/C(=C/Cc1c(cc(c(c1O)C(=O)O)CCc2ccccc2)OC)/C)C" YFB SMILES "OpenEye OEToolkits" 1.9.2 "CC(=CCCC(=CCc1c(cc(c(c1O)C(=O)O)CCc2ccccc2)OC)C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YFB "SYSTEMATIC NAME" ACDLabs 12.01 "3-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-2-hydroxy-4-methoxy-6-(2-phenylethyl)benzoic acid" YFB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "3-[(2E)-3,7-dimethylocta-2,6-dienyl]-4-methoxy-2-oxidanyl-6-(2-phenylethyl)benzoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YFB "Create component" 2011-10-20 EBI YFB "Initial release" 2012-09-28 RCSB YFB "Modify descriptor" 2014-09-05 RCSB #