data_YFL # _chem_comp.id YFL _chem_comp.name "N-[4-(1H-imidazol-1-yl)butyl]-N-({6-[4-(propan-2-yl)anilino]pyridin-3-yl}methyl)acetamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H31 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-13 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 405.536 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YFL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G4V _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YFL C01 C1 C 0 1 Y N N N N N -13.905 9.491 48.849 0.218 2.280 0.874 C01 YFL 1 YFL C02 C2 C 0 1 N N N N N N -13.857 10.565 49.912 -1.205 2.395 1.357 C02 YFL 2 YFL C04 C3 C 0 1 Y N N N N N -15.190 9.022 48.543 0.826 1.044 0.781 C04 YFL 3 YFL C06 C4 C 0 1 Y N N N N N -12.988 7.922 47.303 2.233 3.268 0.074 C06 YFL 4 YFL C10 C5 C 0 1 Y N N N N N -14.305 7.466 46.980 2.784 1.992 0.010 C10 YFL 5 YFL C11 C6 C 0 1 N N N N N N -11.130 11.984 51.428 -3.999 0.752 0.418 C11 YFL 6 YFL C15 C7 C 0 1 N N N N N N -9.607 12.194 51.600 -4.530 -0.612 -0.027 C15 YFL 7 YFL C16 C8 C 0 1 Y N N N N N -13.607 5.672 45.342 4.692 0.566 -0.382 C16 YFL 8 YFL C17 C9 C 0 1 N N N N N N -9.300 12.312 53.110 -5.904 -0.854 0.601 C17 YFL 9 YFL C18 C10 C 0 1 Y N N N N N -12.726 6.402 44.532 5.628 0.206 -1.344 C18 YFL 10 YFL C19 C11 C 0 1 Y N N N N N -13.525 4.255 45.460 4.356 -0.331 0.625 C19 YFL 11 YFL C21 C12 C 0 1 Y N N N N N -11.738 5.658 43.844 6.221 -1.041 -1.296 C21 YFL 12 YFL C22 C13 C 0 1 Y N N N N N -12.557 3.509 44.746 4.953 -1.575 0.667 C22 YFL 13 YFL C23 C14 C 0 1 Y N N N N N -7.119 13.565 53.465 -6.212 -3.357 0.810 C23 YFL 14 YFL C24 C15 C 0 1 Y N N N N N -7.142 11.426 54.012 -7.166 -2.409 -0.917 C24 YFL 15 YFL C25 C16 C 0 1 Y N N N N N -11.665 4.252 43.929 5.884 -1.931 -0.292 C25 YFL 16 YFL C26 C17 C 0 1 Y N N N N N -5.853 13.247 53.967 -6.850 -4.295 0.084 C26 YFL 17 YFL C28 C18 C 0 1 N N N N N N -10.480 3.532 43.133 6.532 -3.290 -0.244 C28 YFL 18 YFL C03 C19 C 0 1 Y N N N N N -12.805 8.944 48.224 0.929 3.417 0.512 C03 YFL 19 YFL N05 N1 N 0 1 N N N N N N -12.987 11.736 49.625 -2.117 2.301 0.215 N05 YFL 20 YFL N07 N2 N 0 1 Y N N N N N -15.371 8.038 47.619 2.071 0.932 0.360 N07 YFL 21 YFL C08 C20 C 0 1 N N N N N N -11.519 11.688 49.945 -2.626 0.995 -0.211 C08 YFL 22 YFL C09 C21 C 0 1 N N N N N N -13.622 12.950 49.096 -2.489 3.417 -0.444 C09 YFL 23 YFL C12 C22 C 0 1 N N N N N N -15.010 12.896 48.444 -3.337 3.311 -1.685 C12 YFL 24 YFL O13 O1 O 0 1 N N N N N N -13.027 14.083 49.178 -2.141 4.505 -0.038 O13 YFL 25 YFL N14 N3 N 0 1 N N N N N N -14.603 6.403 46.058 4.095 1.828 -0.424 N14 YFL 26 YFL N20 N4 N 0 1 Y N N N N N -7.920 12.412 53.487 -6.412 -2.161 0.175 N20 YFL 27 YFL N27 N5 N 0 1 Y N N N N N -5.858 11.942 54.315 -7.419 -3.689 -0.968 N27 YFL 28 YFL C29 C23 C 0 1 N N N N N N -9.888 2.448 44.114 7.283 -3.449 1.080 C29 YFL 29 YFL C30 C24 C 0 1 N N N N N N -10.943 2.929 41.873 5.456 -4.372 -0.353 C30 YFL 30 YFL H32 H1 H 0 1 N N N N N N -14.882 10.937 50.060 -1.416 1.588 2.059 H32 YFL 31 YFL H31 H2 H 0 1 N N N N N N -13.498 10.100 50.842 -1.343 3.354 1.855 H31 YFL 32 YFL H34 H3 H 0 1 N N N N N N -16.047 9.446 49.046 0.275 0.157 1.058 H34 YFL 33 YFL H35 H4 H 0 1 N N N N N N -12.131 7.468 46.827 2.816 4.130 -0.212 H35 YFL 34 YFL H38 H5 H 0 1 N N N N N N -11.653 12.894 51.757 -4.689 1.533 0.096 H38 YFL 35 YFL H39 H6 H 0 1 N N N N N N -11.444 11.135 52.053 -3.910 0.771 1.504 H39 YFL 36 YFL H45 H7 H 0 1 N N N N N N -9.063 11.337 51.176 -4.619 -0.630 -1.114 H45 YFL 37 YFL H44 H8 H 0 1 N N N N N N -9.298 13.115 51.085 -3.841 -1.393 0.294 H44 YFL 38 YFL H46 H9 H 0 1 N N N N N N -9.812 13.211 53.484 -5.814 -0.836 1.687 H46 YFL 39 YFL H47 H10 H 0 1 N N N N N N -9.715 11.421 53.604 -6.593 -0.074 0.280 H47 YFL 40 YFL H48 H11 H 0 1 N N N N N N -12.797 7.476 44.438 5.891 0.900 -2.128 H48 YFL 41 YFL H49 H12 H 0 1 N N N N N N -14.217 3.738 46.109 3.629 -0.054 1.374 H49 YFL 42 YFL H50 H13 H 0 1 N N N N N N -11.017 6.183 43.235 6.948 -1.321 -2.043 H50 YFL 43 YFL H51 H14 H 0 1 N N N N N N -12.500 2.433 44.819 4.692 -2.272 1.449 H51 YFL 44 YFL H52 H15 H 0 1 N N N N N N -7.430 14.539 53.117 -5.653 -3.517 1.720 H52 YFL 45 YFL H53 H16 H 0 1 N N N N N N -7.456 10.405 54.173 -7.499 -1.673 -1.634 H53 YFL 46 YFL H54 H17 H 0 1 N N N N N N -5.018 13.926 54.060 -6.895 -5.350 0.310 H54 YFL 47 YFL H55 H18 H 0 1 N N N N N N -9.700 4.279 42.926 7.232 -3.388 -1.073 H55 YFL 48 YFL H33 H19 H 0 1 N N N N N N -11.813 9.306 48.448 0.475 4.395 0.572 H33 YFL 49 YFL H36 H20 H 0 1 N N N N N N -11.153 10.681 49.696 -1.936 0.214 0.110 H36 YFL 50 YFL H37 H21 H 0 1 N N N N N N -11.012 12.429 49.310 -2.715 0.976 -1.297 H37 YFL 51 YFL H41 H22 H 0 1 N N N N N N -15.305 13.906 48.124 -3.625 2.272 -1.841 H41 YFL 52 YFL H40 H23 H 0 1 N N N N N N -14.979 12.229 47.570 -4.233 3.922 -1.566 H40 YFL 53 YFL H42 H24 H 0 1 N N N N N N -15.742 12.514 49.171 -2.768 3.664 -2.545 H42 YFL 54 YFL H43 H25 H 0 1 N N N N N N -15.562 6.162 45.910 4.595 2.590 -0.757 H43 YFL 55 YFL H57 H26 H 0 1 N N N N N N -9.063 1.916 43.618 6.583 -3.351 1.909 H57 YFL 56 YFL H58 H27 H 0 1 N N N N N N -9.512 2.942 45.022 7.753 -4.433 1.115 H58 YFL 57 YFL H56 H28 H 0 1 N N N N N N -10.676 1.730 44.386 8.050 -2.678 1.158 H56 YFL 58 YFL H61 H29 H 0 1 N N N N N N -10.096 2.448 41.363 4.921 -4.259 -1.296 H61 YFL 59 YFL H59 H30 H 0 1 N N N N N N -11.716 2.177 42.089 5.925 -5.356 -0.318 H59 YFL 60 YFL H60 H31 H 0 1 N N N N N N -11.364 3.712 41.225 4.756 -4.274 0.477 H60 YFL 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YFL C01 C02 SING N N 1 YFL C01 C03 DOUB Y N 2 YFL C01 C04 SING Y N 3 YFL C02 N05 SING N N 4 YFL C03 C06 SING Y N 5 YFL C04 N07 DOUB Y N 6 YFL N05 C08 SING N N 7 YFL N05 C09 SING N N 8 YFL C06 C10 DOUB Y N 9 YFL N07 C10 SING Y N 10 YFL C08 C11 SING N N 11 YFL C09 C12 SING N N 12 YFL C09 O13 DOUB N N 13 YFL C10 N14 SING N N 14 YFL C11 C15 SING N N 15 YFL N14 C16 SING N N 16 YFL C15 C17 SING N N 17 YFL C16 C18 DOUB Y N 18 YFL C16 C19 SING Y N 19 YFL C17 N20 SING N N 20 YFL C18 C21 SING Y N 21 YFL C19 C22 DOUB Y N 22 YFL N20 C23 SING Y N 23 YFL N20 C24 SING Y N 24 YFL C21 C25 DOUB Y N 25 YFL C22 C25 SING Y N 26 YFL C23 C26 DOUB Y N 27 YFL C24 N27 DOUB Y N 28 YFL C26 N27 SING Y N 29 YFL C25 C28 SING N N 30 YFL C28 C29 SING N N 31 YFL C28 C30 SING N N 32 YFL C02 H32 SING N N 33 YFL C02 H31 SING N N 34 YFL C04 H34 SING N N 35 YFL C06 H35 SING N N 36 YFL C11 H38 SING N N 37 YFL C11 H39 SING N N 38 YFL C15 H45 SING N N 39 YFL C15 H44 SING N N 40 YFL C17 H46 SING N N 41 YFL C17 H47 SING N N 42 YFL C18 H48 SING N N 43 YFL C19 H49 SING N N 44 YFL C21 H50 SING N N 45 YFL C22 H51 SING N N 46 YFL C23 H52 SING N N 47 YFL C24 H53 SING N N 48 YFL C26 H54 SING N N 49 YFL C28 H55 SING N N 50 YFL C03 H33 SING N N 51 YFL C08 H36 SING N N 52 YFL C08 H37 SING N N 53 YFL C12 H41 SING N N 54 YFL C12 H40 SING N N 55 YFL C12 H42 SING N N 56 YFL N14 H43 SING N N 57 YFL C29 H57 SING N N 58 YFL C29 H58 SING N N 59 YFL C29 H56 SING N N 60 YFL C30 H61 SING N N 61 YFL C30 H59 SING N N 62 YFL C30 H60 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YFL SMILES ACDLabs 12.01 "CC(C)c1ccc(cc1)Nc1ccc(cn1)CN(CCCCn1ccnc1)C(C)=O" YFL InChI InChI 1.06 "InChI=1S/C24H31N5O/c1-19(2)22-7-9-23(10-8-22)27-24-11-6-21(16-26-24)17-29(20(3)30)14-5-4-13-28-15-12-25-18-28/h6-12,15-16,18-19H,4-5,13-14,17H2,1-3H3,(H,26,27)" YFL InChIKey InChI 1.06 RXDPQGNPSDYGLU-UHFFFAOYSA-N YFL SMILES_CANONICAL CACTVS 3.385 "CC(C)c1ccc(Nc2ccc(CN(CCCCn3ccnc3)C(C)=O)cn2)cc1" YFL SMILES CACTVS 3.385 "CC(C)c1ccc(Nc2ccc(CN(CCCCn3ccnc3)C(C)=O)cn2)cc1" YFL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)c1ccc(cc1)Nc2ccc(cn2)CN(CCCCn3ccnc3)C(=O)C" YFL SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)c1ccc(cc1)Nc2ccc(cn2)CN(CCCCn3ccnc3)C(=O)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YFL "SYSTEMATIC NAME" ACDLabs 12.01 "N-[4-(1H-imidazol-1-yl)butyl]-N-({6-[4-(propan-2-yl)anilino]pyridin-3-yl}methyl)acetamide" YFL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-(4-imidazol-1-ylbutyl)-~{N}-[[6-[(4-propan-2-ylphenyl)amino]pyridin-3-yl]methyl]ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YFL "Create component" 2023-06-13 RCSB YFL "Initial release" 2024-12-18 RCSB #