data_YG7
#
_chem_comp.id YG7
_chem_comp.name "5-{4-[4-(5-cyano-1H-indol-3-yl)butyl]piperazin-1-yl}-1-benzofuran-2-carboxamide"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C26 H27 N5 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-03-02
_chem_comp.pdbx_modified_date 2021-08-06
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 441.525
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code YG7
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7LWD
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YG7 C10 C1 C 0 1 N N N 154.694 166.693 151.350 1.809 -0.180 -0.174 C10 YG7 1
YG7 C13 C2 C 0 1 N N N 152.399 169.547 149.775 -2.332 -1.243 -0.479 C13 YG7 2
YG7 C15 C3 C 0 1 Y N N 156.724 165.128 150.767 3.961 -0.698 0.657 C15 YG7 3
YG7 C17 C4 C 0 1 Y N N 151.655 172.561 148.814 -6.094 -0.987 -1.140 C17 YG7 4
YG7 C20 C5 C 0 1 Y N N 152.114 173.956 148.869 -6.907 0.085 -0.558 C20 YG7 5
YG7 C21 C6 C 0 1 Y N N 158.390 163.478 151.504 5.930 0.551 0.083 C21 YG7 6
YG7 C22 C7 C 0 1 Y N N 150.518 172.488 149.612 -6.917 -2.024 -1.362 C22 YG7 7
YG7 C24 C8 C 0 1 Y N N 156.945 162.986 149.634 6.070 -1.836 0.422 C24 YG7 8
YG7 C26 C9 C 0 1 Y N N 159.452 162.785 152.205 6.867 1.619 -0.262 C26 YG7 9
YG7 C28 C10 C 0 1 Y N N 151.410 176.010 149.942 -9.234 0.378 0.045 C28 YG7 10
YG7 C08 C11 C 0 1 N N N 153.959 167.731 150.455 0.324 -0.180 0.200 C08 YG7 11
YG7 C09 C12 C 0 1 N N N 155.927 168.877 150.058 0.676 -2.124 1.599 C09 YG7 12
YG7 C11 C13 C 0 1 N N N 156.771 167.727 150.695 2.161 -2.123 1.226 C11 YG7 13
YG7 C12 C14 C 0 1 N N N 153.952 169.838 149.766 -1.544 -1.607 0.782 C12 YG7 14
YG7 C14 C15 C 0 1 N N N 151.752 170.021 148.478 -3.830 -1.298 -0.177 C14 YG7 15
YG7 C16 C16 C 0 1 N N N 152.305 171.390 148.020 -4.618 -0.934 -1.437 C16 YG7 16
YG7 C18 C17 C 0 1 Y N N 157.756 164.756 151.642 4.560 0.510 0.357 C18 YG7 17
YG7 C19 C18 C 0 1 Y N N 156.314 164.262 149.767 4.720 -1.867 0.691 C19 YG7 18
YG7 C23 C19 C 0 1 Y N N 157.986 162.613 150.516 6.692 -0.631 0.112 C23 YG7 19
YG7 C25 C20 C 0 1 Y N N 151.239 174.611 149.679 -8.218 -0.421 -0.475 C25 YG7 20
YG7 C27 C21 C 0 1 Y N N 153.219 174.667 148.270 -6.631 1.379 -0.122 C27 YG7 21
YG7 C29 C22 C 0 1 Y N N 159.573 161.541 151.539 8.079 1.024 -0.408 C29 YG7 22
YG7 C30 C23 C 0 1 Y N N 153.387 176.051 148.531 -7.661 2.161 0.394 C30 YG7 23
YG7 C31 C24 C 0 1 Y N N 152.496 176.712 149.355 -8.962 1.644 0.471 C31 YG7 24
YG7 C32 C25 C 0 1 N N N 160.554 160.466 151.908 9.326 1.719 -0.756 C32 YG7 25
YG7 C33 C26 C 0 1 N N N 154.548 176.822 147.910 -7.391 3.492 0.846 C33 YG7 26
YG7 N03 N1 N 0 1 N N N 154.606 168.921 150.436 -0.105 -1.555 0.492 N03 YG7 27
YG7 N04 N2 N 0 1 N N N 156.074 166.491 150.935 2.590 -0.748 0.934 N04 YG7 28
YG7 N05 N3 N 0 1 Y N N 150.283 173.705 150.116 -8.189 -1.703 -0.971 N05 YG7 29
YG7 N06 N4 N 0 1 N N N 160.735 159.324 151.051 10.474 1.023 -0.876 N06 YG7 30
YG7 N07 N5 N 0 1 N N N 155.643 176.990 148.896 -7.177 4.549 1.205 N07 YG7 31
YG7 O01 O1 O 0 1 Y N N 158.725 161.483 150.590 7.964 -0.303 -0.189 O01 YG7 32
YG7 O02 O2 O 0 1 N N N 161.175 160.570 152.877 9.322 2.922 -0.937 O02 YG7 33
YG7 H1 H1 H 0 1 N N N 154.685 167.052 152.390 1.958 -0.782 -1.070 H1 YG7 34
YG7 H2 H2 H 0 1 N N N 154.161 165.732 151.289 2.136 0.842 -0.363 H2 YG7 35
YG7 H3 H3 H 0 1 N N N 151.938 170.076 150.622 -2.061 -0.237 -0.798 H3 YG7 36
YG7 H4 H4 H 0 1 N N N 152.235 168.465 149.885 -2.095 -1.952 -1.272 H4 YG7 37
YG7 H5 H5 H 0 1 N N N 149.927 171.602 149.793 -6.620 -2.971 -1.787 H5 YG7 38
YG7 H6 H6 H 0 1 N N N 156.626 162.305 148.858 6.647 -2.748 0.452 H6 YG7 39
YG7 H7 H7 H 0 1 N N N 160.025 163.139 153.049 6.641 2.669 -0.376 H7 YG7 40
YG7 H8 H8 H 0 1 N N N 150.714 176.529 150.585 -10.241 -0.007 0.111 H8 YG7 41
YG7 H9 H9 H 0 1 N N N 152.943 167.884 150.847 0.171 0.443 1.081 H9 YG7 42
YG7 H10 H10 H 0 1 N N N 153.901 167.340 149.429 -0.260 0.215 -0.631 H10 YG7 43
YG7 H11 H11 H 0 1 N N N 155.963 168.758 148.965 0.349 -3.146 1.788 H11 YG7 44
YG7 H12 H12 H 0 1 N N N 156.392 169.834 150.338 0.527 -1.522 2.496 H12 YG7 45
YG7 H13 H13 H 0 1 N N N 157.612 167.513 150.019 2.746 -2.518 2.057 H13 YG7 46
YG7 H14 H14 H 0 1 N N N 157.158 168.088 151.659 2.315 -2.747 0.345 H14 YG7 47
YG7 H15 H15 H 0 1 N N N 154.310 169.847 148.726 -1.781 -0.898 1.575 H15 YG7 48
YG7 H16 H16 H 0 1 N N N 154.137 170.820 150.226 -1.814 -2.614 1.101 H16 YG7 49
YG7 H17 H17 H 0 1 N N N 150.667 170.111 148.635 -4.101 -2.304 0.143 H17 YG7 50
YG7 H18 H18 H 0 1 N N N 151.948 169.278 147.691 -4.067 -0.589 0.617 H18 YG7 51
YG7 H19 H19 H 0 1 N N N 153.393 171.409 148.182 -4.381 -1.643 -2.230 H19 YG7 52
YG7 H20 H20 H 0 1 N N N 152.091 171.522 146.949 -4.348 0.073 -1.756 H20 YG7 53
YG7 H21 H21 H 0 1 N N N 158.073 165.434 152.421 3.974 1.417 0.334 H21 YG7 54
YG7 H22 H22 H 0 1 N N N 155.522 164.549 149.091 4.245 -2.807 0.931 H22 YG7 55
YG7 H23 H23 H 0 1 N N N 153.914 174.148 147.627 -5.627 1.772 -0.183 H23 YG7 56
YG7 H24 H24 H 0 1 N N N 152.626 177.766 149.553 -9.757 2.256 0.872 H24 YG7 57
YG7 H28 H28 H 0 1 N N N 149.522 173.931 150.725 -8.956 -2.293 -1.035 H28 YG7 58
YG7 H29 H29 H 0 1 N N N 161.400 158.617 151.293 10.478 0.064 -0.732 H29 YG7 59
YG7 H30 H30 H 0 1 N N N 160.196 159.237 150.213 11.298 1.482 -1.105 H30 YG7 60
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YG7 C33 C30 SING N N 1
YG7 C33 N07 TRIP N N 2
YG7 C16 C14 SING N N 3
YG7 C16 C17 SING N N 4
YG7 C27 C30 DOUB Y N 5
YG7 C27 C20 SING Y N 6
YG7 C14 C13 SING N N 7
YG7 C30 C31 SING Y N 8
YG7 C17 C20 SING Y N 9
YG7 C17 C22 DOUB Y N 10
YG7 C20 C25 DOUB Y N 11
YG7 C31 C28 DOUB Y N 12
YG7 C22 N05 SING Y N 13
YG7 C24 C19 DOUB Y N 14
YG7 C24 C23 SING Y N 15
YG7 C25 C28 SING Y N 16
YG7 C25 N05 SING Y N 17
YG7 C12 C13 SING N N 18
YG7 C12 N03 SING N N 19
YG7 C19 C15 SING Y N 20
YG7 C09 N03 SING N N 21
YG7 C09 C11 SING N N 22
YG7 N03 C08 SING N N 23
YG7 C08 C10 SING N N 24
YG7 C23 O01 SING Y N 25
YG7 C23 C21 DOUB Y N 26
YG7 O01 C29 SING Y N 27
YG7 C11 N04 SING N N 28
YG7 C15 N04 SING N N 29
YG7 C15 C18 DOUB Y N 30
YG7 N04 C10 SING N N 31
YG7 N06 C32 SING N N 32
YG7 C21 C18 SING Y N 33
YG7 C21 C26 SING Y N 34
YG7 C29 C32 SING N N 35
YG7 C29 C26 DOUB Y N 36
YG7 C32 O02 DOUB N N 37
YG7 C10 H1 SING N N 38
YG7 C10 H2 SING N N 39
YG7 C13 H3 SING N N 40
YG7 C13 H4 SING N N 41
YG7 C22 H5 SING N N 42
YG7 C24 H6 SING N N 43
YG7 C26 H7 SING N N 44
YG7 C28 H8 SING N N 45
YG7 C08 H9 SING N N 46
YG7 C08 H10 SING N N 47
YG7 C09 H11 SING N N 48
YG7 C09 H12 SING N N 49
YG7 C11 H13 SING N N 50
YG7 C11 H14 SING N N 51
YG7 C12 H15 SING N N 52
YG7 C12 H16 SING N N 53
YG7 C14 H17 SING N N 54
YG7 C14 H18 SING N N 55
YG7 C16 H19 SING N N 56
YG7 C16 H20 SING N N 57
YG7 C18 H21 SING N N 58
YG7 C19 H22 SING N N 59
YG7 C27 H23 SING N N 60
YG7 C31 H24 SING N N 61
YG7 N05 H28 SING N N 62
YG7 N06 H29 SING N N 63
YG7 N06 H30 SING N N 64
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YG7 SMILES ACDLabs 12.01 "N#Cc1ccc2[NH]cc(CCCCN3CCN(CC3)c3cc4cc(oc4cc3)C(N)=O)c2c1"
YG7 InChI InChI 1.03 "InChI=1S/C26H27N5O2/c27-16-18-4-6-23-22(13-18)19(17-29-23)3-1-2-8-30-9-11-31(12-10-30)21-5-7-24-20(14-21)15-25(33-24)26(28)32/h4-7,13-15,17,29H,1-3,8-12H2,(H2,28,32)"
YG7 InChIKey InChI 1.03 SGEGOXDYSFKCPT-UHFFFAOYSA-N
YG7 SMILES_CANONICAL CACTVS 3.385 "NC(=O)c1oc2ccc(cc2c1)N3CCN(CCCCc4c[nH]c5ccc(cc45)C#N)CC3"
YG7 SMILES CACTVS 3.385 "NC(=O)c1oc2ccc(cc2c1)N3CCN(CCCCc4c[nH]c5ccc(cc45)C#N)CC3"
YG7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1C#N)c(c[nH]2)CCCCN3CCN(CC3)c4ccc5c(c4)cc(o5)C(=O)N"
YG7 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1C#N)c(c[nH]2)CCCCN3CCN(CC3)c4ccc5c(c4)cc(o5)C(=O)N"
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YG7 "SYSTEMATIC NAME" ACDLabs 12.01 "5-{4-[4-(5-cyano-1H-indol-3-yl)butyl]piperazin-1-yl}-1-benzofuran-2-carboxamide"
YG7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-[4-[4-(5-cyano-1~{H}-indol-3-yl)butyl]piperazin-1-yl]-1-benzofuran-2-carboxamide"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YG7 "Create component" 2021-03-02 RCSB
YG7 "Initial release" 2021-08-11 RCSB
##