data_YGE # _chem_comp.id YGE _chem_comp.name "(4-cyano-2-ethoxyphenyl)methyl (3aR,6aS)-5-(1H-benzotriazole-5-carbonyl)hexahydropyrrolo[3,4-c]pyrrole-2(1H)-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H24 N6 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-13 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 460.485 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YGE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7G5S _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YGE C11 C1 C 0 1 N N N N N N -10.962 12.827 51.465 4.985 1.591 0.261 C11 YGE 1 YGE C15 C2 C 0 1 Y N N N N N -7.421 13.757 52.403 5.569 -2.083 0.704 C15 YGE 2 YGE C16 C3 C 0 1 Y N N N N N -9.261 11.532 52.870 6.972 0.169 -0.171 C16 YGE 3 YGE C17 C4 C 0 1 Y N N N N N -7.954 11.549 53.405 7.598 -1.081 -0.176 C17 YGE 4 YGE C18 C5 C 0 1 Y N N N N N -7.047 12.648 53.178 6.886 -2.211 0.267 C18 YGE 5 YGE C22 C6 C 0 1 N N N N N N -14.245 7.798 47.648 -2.097 2.039 -0.150 C22 YGE 6 YGE C25 C7 C 0 1 N N N N N N -13.790 5.978 46.157 -4.282 1.086 -0.034 C25 YGE 7 YGE C26 C8 C 0 1 Y N N N N N -12.836 5.164 45.280 -4.947 -0.266 -0.041 C26 YGE 8 YGE C27 C9 C 0 1 Y N N N N N -11.989 5.743 44.243 -6.329 -0.358 0.053 C27 YGE 9 YGE C28 C10 C 0 1 Y N N N N N -11.177 4.903 43.459 -6.944 -1.599 0.047 C28 YGE 10 YGE N1 N1 N 0 1 N N N N N N -11.569 11.950 50.579 3.663 1.674 0.011 N1 YGE 11 YGE C2 C11 C 0 1 N N N N N N -10.912 10.704 50.057 2.867 2.936 -0.114 C2 YGE 12 YGE C3 C12 C 0 1 N N N N N N -13.081 11.863 50.464 2.732 0.525 -0.197 C3 YGE 13 YGE C4 C13 C 0 1 N N S N N N -13.268 10.405 50.048 1.441 1.157 -0.606 C4 YGE 14 YGE C5 C14 C 0 1 N N S N N N -12.025 10.249 49.122 1.474 2.479 0.262 C5 YGE 15 YGE C6 C15 C 0 1 N N N N N N -12.227 8.849 48.607 0.202 3.105 -0.270 C6 YGE 16 YGE N7 N2 N 0 1 N N N N N N -13.663 8.916 48.271 -0.756 1.955 -0.248 N7 YGE 17 YGE C8 C16 C 0 1 N N N N N N -14.418 9.840 49.191 0.041 0.696 -0.355 C8 YGE 18 YGE C12 C17 C 0 1 Y N N N N N -9.606 12.636 52.091 5.655 0.274 0.259 C12 YGE 19 YGE O13 O1 O 0 1 N N N N N N -11.608 13.827 51.786 5.627 2.599 0.482 O13 YGE 20 YGE C14 C18 C 0 1 Y N N N N N -8.701 13.732 51.885 4.963 -0.862 0.701 C14 YGE 21 YGE N19 N3 N 0 1 Y N N N N N -5.867 12.317 53.870 7.747 -3.274 0.148 N19 YGE 22 YGE N20 N4 N 0 1 Y N N N N N -6.054 11.116 54.466 8.950 -2.762 -0.359 N20 YGE 23 YGE N21 N5 N 0 1 Y N N N N N -7.247 10.642 54.202 8.836 -1.493 -0.537 N21 YGE 24 YGE O23 O2 O 0 1 N N N N N N -15.435 7.451 47.778 -2.633 3.127 -0.069 O23 YGE 25 YGE O24 O3 O 0 1 N N N N N N -13.310 7.116 46.838 -2.844 0.919 -0.142 O24 YGE 26 YGE C29 C19 C 0 1 Y N N N N N -11.206 3.519 43.691 -6.169 -2.755 -0.055 C29 YGE 27 YGE C30 C20 C 0 1 Y N N N N N -12.006 2.946 44.658 -4.780 -2.653 -0.149 C30 YGE 28 YGE C31 C21 C 0 1 Y N N N N N -12.810 3.776 45.435 -4.179 -1.411 -0.147 C31 YGE 29 YGE O32 O4 O 0 1 N N N N N N -12.027 7.112 44.081 -7.080 0.771 0.151 O32 YGE 30 YGE C33 C22 C 0 1 N N N N N N -11.182 7.664 43.056 -8.495 0.603 0.244 C33 YGE 31 YGE C34 C23 C 0 1 N N N N N N -11.145 9.164 43.336 -9.166 1.974 0.347 C34 YGE 32 YGE C35 C24 C 0 1 N N N N N N -10.402 2.676 42.906 -6.797 -4.042 -0.061 C35 YGE 33 YGE N36 N6 N 0 1 N N N N N N -9.747 1.969 42.277 -7.295 -5.063 -0.066 N36 YGE 34 YGE H46 H1 H 0 1 N N N N N N -6.747 14.582 52.222 5.027 -2.953 1.042 H46 YGE 35 YGE H47 H2 H 0 1 N N N N N N -9.947 10.718 53.052 7.506 1.045 -0.508 H47 YGE 36 YGE H49 H3 H 0 1 N N N N N N -14.186 5.292 46.920 -4.644 1.674 -0.878 H49 YGE 37 YGE H50 H4 H 0 1 N N N N N N -14.611 6.317 45.507 -4.519 1.603 0.896 H50 YGE 38 YGE H51 H5 H 0 1 N N N N N N -10.541 5.317 42.690 -8.019 -1.671 0.120 H51 YGE 39 YGE H38 H6 H 0 1 N N N N N N -9.978 10.921 49.518 3.227 3.692 0.583 H38 YGE 40 YGE H37 H7 H 0 1 N N N N N N -10.714 9.973 50.855 2.890 3.309 -1.138 H37 YGE 41 YGE H39 H8 H 0 1 N N N N N N -13.570 12.073 51.427 3.103 -0.127 -0.987 H39 YGE 42 YGE H40 H9 H 0 1 N N N N N N -13.467 12.552 49.699 2.605 -0.034 0.730 H40 YGE 43 YGE H10 H10 H 0 1 N N N N N N -13.132 9.761 50.929 1.514 1.449 -1.654 H10 YGE 44 YGE H9 H11 H 0 1 N N N N N N -12.112 10.962 48.289 1.402 2.266 1.328 H9 YGE 45 YGE H42 H12 H 0 1 N N N N N N -11.608 8.645 47.721 -0.139 3.906 0.386 H42 YGE 46 YGE H41 H13 H 0 1 N N N N N N -12.022 8.094 49.380 0.346 3.470 -1.287 H41 YGE 47 YGE H43 H14 H 0 1 N N N N N N -15.148 9.292 49.805 -0.315 0.090 -1.188 H43 YGE 48 YGE H44 H15 H 0 1 N N N N N N -14.933 10.635 48.632 -0.012 0.132 0.577 H44 YGE 49 YGE H45 H16 H 0 1 N N N N N N -9.037 14.575 51.299 3.942 -0.770 1.042 H45 YGE 50 YGE H48 H17 H 0 1 N N N N N N -5.036 12.872 53.914 7.559 -4.199 0.372 H48 YGE 51 YGE H52 H18 H 0 1 N N N N N N -12.009 1.877 44.809 -4.176 -3.545 -0.227 H52 YGE 52 YGE H53 H19 H 0 1 N N N N N N -13.440 3.328 46.189 -3.104 -1.333 -0.224 H53 YGE 53 YGE H54 H20 H 0 1 N N N N N N -10.171 7.235 43.116 -8.859 0.086 -0.644 H54 YGE 54 YGE H55 H21 H 0 1 N N N N N N -11.605 7.467 42.060 -8.734 0.015 1.130 H55 YGE 55 YGE H57 H22 H 0 1 N N N N N N -10.512 9.662 42.587 -10.247 1.846 0.418 H57 YGE 56 YGE H56 H23 H 0 1 N N N N N N -12.165 9.572 43.283 -8.803 2.491 1.235 H56 YGE 57 YGE H58 H24 H 0 1 N N N N N N -10.731 9.339 44.340 -8.928 2.563 -0.539 H58 YGE 58 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YGE N1 C2 SING N N 1 YGE N1 C3 SING N N 2 YGE N1 C11 SING N N 3 YGE C2 C5 SING N N 4 YGE C3 C4 SING N N 5 YGE C4 C5 SING N N 6 YGE C4 C8 SING N N 7 YGE C5 C6 SING N N 8 YGE C6 N7 SING N N 9 YGE N7 C8 SING N N 10 YGE N7 C22 SING N N 11 YGE C11 C12 SING N N 12 YGE C11 O13 DOUB N N 13 YGE C12 C14 DOUB Y N 14 YGE C12 C16 SING Y N 15 YGE C14 C15 SING Y N 16 YGE C15 C18 DOUB Y N 17 YGE C16 C17 DOUB Y N 18 YGE C17 C18 SING Y N 19 YGE C17 N21 SING Y N 20 YGE C18 N19 SING Y N 21 YGE N19 N20 SING Y N 22 YGE N20 N21 DOUB Y N 23 YGE C22 O23 DOUB N N 24 YGE C22 O24 SING N N 25 YGE O24 C25 SING N N 26 YGE C25 C26 SING N N 27 YGE C26 C27 DOUB Y N 28 YGE C26 C31 SING Y N 29 YGE C27 C28 SING Y N 30 YGE C27 O32 SING N N 31 YGE C28 C29 DOUB Y N 32 YGE C29 C30 SING Y N 33 YGE C29 C35 SING N N 34 YGE C30 C31 DOUB Y N 35 YGE O32 C33 SING N N 36 YGE C33 C34 SING N N 37 YGE C35 N36 TRIP N N 38 YGE C15 H46 SING N N 39 YGE C16 H47 SING N N 40 YGE C25 H49 SING N N 41 YGE C25 H50 SING N N 42 YGE C28 H51 SING N N 43 YGE C2 H38 SING N N 44 YGE C2 H37 SING N N 45 YGE C3 H39 SING N N 46 YGE C3 H40 SING N N 47 YGE C4 H10 SING N N 48 YGE C5 H9 SING N N 49 YGE C6 H42 SING N N 50 YGE C6 H41 SING N N 51 YGE C8 H43 SING N N 52 YGE C8 H44 SING N N 53 YGE C14 H45 SING N N 54 YGE N19 H48 SING N N 55 YGE C30 H52 SING N N 56 YGE C31 H53 SING N N 57 YGE C33 H54 SING N N 58 YGE C33 H55 SING N N 59 YGE C34 H57 SING N N 60 YGE C34 H56 SING N N 61 YGE C34 H58 SING N N 62 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YGE SMILES ACDLabs 12.01 "N#Cc1ccc(COC(=O)N2CC3CN(CC3C2)C(=O)c2cc3nn[NH]c3cc2)c(OCC)c1" YGE InChI InChI 1.06 "InChI=1S/C24H24N6O4/c1-2-33-22-7-15(9-25)3-4-17(22)14-34-24(32)30-12-18-10-29(11-19(18)13-30)23(31)16-5-6-20-21(8-16)27-28-26-20/h3-8,18-19H,2,10-14H2,1H3,(H,26,27,28)" YGE InChIKey InChI 1.06 SXYSIHXUTNMGIJ-UHFFFAOYSA-N YGE SMILES_CANONICAL CACTVS 3.385 "CCOc1cc(ccc1COC(=O)N2C[C@@H]3CN(C[C@H]3C2)C(=O)c4ccc5[nH]nnc5c4)C#N" YGE SMILES CACTVS 3.385 "CCOc1cc(ccc1COC(=O)N2C[CH]3CN(C[CH]3C2)C(=O)c4ccc5[nH]nnc5c4)C#N" YGE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCOc1cc(ccc1COC(=O)N2C[C@@H]3CN(C[C@H]3C2)C(=O)c4ccc5c(c4)nn[nH]5)C#N" YGE SMILES "OpenEye OEToolkits" 2.0.7 "CCOc1cc(ccc1COC(=O)N2CC3CN(CC3C2)C(=O)c4ccc5c(c4)nn[nH]5)C#N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YGE "SYSTEMATIC NAME" ACDLabs 12.01 "(4-cyano-2-ethoxyphenyl)methyl (3aR,6aS)-5-(1H-benzotriazole-5-carbonyl)hexahydropyrrolo[3,4-c]pyrrole-2(1H)-carboxylate" YGE "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(4-cyano-2-ethoxy-phenyl)methyl (3~{a}~{S},6~{a}~{S})-2-(1~{H}-benzotriazol-5-ylcarbonyl)-1,3,3~{a},4,6,6~{a}-hexahydropyrrolo[3,4-c]pyrrole-5-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YGE "Create component" 2023-06-13 RCSB YGE "Initial release" 2024-12-18 RCSB #