data_YGI # _chem_comp.id YGI _chem_comp.name "{[(4S)-8,9-dimethylthieno[3,2-e][1,2,4]triazolo[4,3-c]pyrimidin-3-yl]sulfanyl}acetic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H10 N4 O2 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-14 _chem_comp.pdbx_modified_date 2023-07-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 294.353 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YGI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8T5K _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YGI C1 C1 C 0 1 N N N 39.149 -4.558 14.308 -5.534 0.159 -0.001 C1 YGI 1 YGI N1 N1 N 0 1 Y N N 38.907 -6.009 17.478 -0.162 -0.489 -0.002 N1 YGI 2 YGI O1 O1 O 0 1 N N N 39.323 -5.807 14.406 -6.574 1.008 0.001 O1 YGI 3 YGI C2 C2 C 0 1 N N N 37.761 -4.007 14.678 -4.125 0.694 0.000 C2 YGI 4 YGI N2 N2 N 0 1 Y N N 40.526 -4.852 18.366 0.086 1.664 0.001 N2 YGI 5 YGI O2 O2 O 0 1 N N N 40.103 -3.828 13.930 -5.727 -1.034 0.003 O2 YGI 6 YGI C3 C3 C 0 1 Y N N 38.722 -4.702 17.218 -1.386 0.117 -0.001 C3 YGI 7 YGI N3 N3 N 0 1 Y N N 39.707 -4.003 17.734 -1.178 1.414 0.001 N3 YGI 8 YGI C4 C4 C 0 1 Y N N 40.026 -6.084 18.193 0.757 0.539 -0.001 C4 YGI 9 YGI N4 N4 N 0 1 Y N N 38.615 -8.286 17.543 1.528 -2.087 0.004 N4 YGI 10 YGI C5 C5 C 0 1 Y N N 38.205 -7.095 17.151 0.268 -1.782 0.001 C5 YGI 11 YGI C6 C6 C 0 1 Y N N 39.709 -8.445 18.263 2.512 -1.161 -0.003 C6 YGI 12 YGI C7 C7 C 0 1 Y N N 40.477 -7.340 18.621 2.192 0.192 -0.001 C7 YGI 13 YGI C8 C8 C 0 1 Y N N 41.797 -9.038 19.644 4.491 0.396 -0.001 C8 YGI 14 YGI C9 C9 C 0 1 Y N N 41.646 -7.658 19.392 3.324 1.020 -0.000 C9 YGI 15 YGI C10 C10 C 0 1 N N N 42.900 -9.746 20.431 5.832 1.085 0.001 C10 YGI 16 YGI C11 C11 C 0 1 N N N 42.610 -6.579 19.888 3.218 2.523 0.001 C11 YGI 17 YGI S1 S1 S 0 1 N N N 37.374 -4.080 16.226 -2.953 -0.690 -0.002 S1 YGI 18 YGI S2 S2 S 0 1 Y N N 40.493 -9.791 18.890 4.263 -1.344 0.000 S2 YGI 19 YGI H1 H1 H 0 1 N N N 40.215 -6.023 14.161 -7.459 0.617 0.001 H1 YGI 20 YGI H2 H2 H 0 1 N N N 37.724 -2.952 14.370 -3.968 1.305 -0.889 H2 YGI 21 YGI H3 H3 H 0 1 N N N 37.009 -4.580 14.115 -3.968 1.302 0.891 H3 YGI 22 YGI H4 H4 H 0 1 N N N 37.302 -6.999 16.566 -0.463 -2.577 -0.000 H4 YGI 23 YGI H5 H5 H 0 1 N N N 42.713 -10.830 20.431 6.154 1.250 1.029 H5 YGI 24 YGI H6 H6 H 0 1 N N N 43.874 -9.542 19.962 6.562 0.461 -0.514 H6 YGI 25 YGI H7 H7 H 0 1 N N N 42.907 -9.375 21.467 5.748 2.044 -0.511 H7 YGI 26 YGI H8 H8 H 0 1 N N N 42.288 -6.226 20.879 3.192 2.884 1.029 H8 YGI 27 YGI H9 H9 H 0 1 N N N 43.624 -6.999 19.961 4.080 2.948 -0.512 H9 YGI 28 YGI H10 H10 H 0 1 N N N 42.612 -5.736 19.181 2.305 2.823 -0.513 H10 YGI 29 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YGI O2 C1 DOUB N N 1 YGI C1 O1 SING N N 2 YGI C1 C2 SING N N 3 YGI C2 S1 SING N N 4 YGI S1 C3 SING N N 5 YGI C5 N1 SING Y N 6 YGI C5 N4 DOUB Y N 7 YGI C3 N1 SING Y N 8 YGI C3 N3 DOUB Y N 9 YGI N1 C4 SING Y N 10 YGI N4 C6 SING Y N 11 YGI N3 N2 SING Y N 12 YGI C4 N2 DOUB Y N 13 YGI C4 C7 SING Y N 14 YGI C6 C7 DOUB Y N 15 YGI C6 S2 SING Y N 16 YGI C7 C9 SING Y N 17 YGI S2 C8 SING Y N 18 YGI C9 C8 DOUB Y N 19 YGI C9 C11 SING N N 20 YGI C8 C10 SING N N 21 YGI O1 H1 SING N N 22 YGI C2 H2 SING N N 23 YGI C2 H3 SING N N 24 YGI C5 H4 SING N N 25 YGI C10 H5 SING N N 26 YGI C10 H6 SING N N 27 YGI C10 H7 SING N N 28 YGI C11 H8 SING N N 29 YGI C11 H9 SING N N 30 YGI C11 H10 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YGI SMILES ACDLabs 12.01 "O=C(O)CSc1nnc2n1cnc1sc(C)c(C)c21" YGI InChI InChI 1.06 "InChI=1S/C11H10N4O2S2/c1-5-6(2)19-10-8(5)9-13-14-11(15(9)4-12-10)18-3-7(16)17/h4H,3H2,1-2H3,(H,16,17)" YGI InChIKey InChI 1.06 LKRSMSJNYWHAHQ-UHFFFAOYSA-N YGI SMILES_CANONICAL CACTVS 3.385 "Cc1sc2ncn3c(SCC(O)=O)nnc3c2c1C" YGI SMILES CACTVS 3.385 "Cc1sc2ncn3c(SCC(O)=O)nnc3c2c1C" YGI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(sc2c1c3nnc(n3cn2)SCC(=O)O)C" YGI SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(sc2c1c3nnc(n3cn2)SCC(=O)O)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YGI "SYSTEMATIC NAME" ACDLabs 12.01 "{[(4S)-8,9-dimethylthieno[3,2-e][1,2,4]triazolo[4,3-c]pyrimidin-3-yl]sulfanyl}acetic acid" YGI "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[(11,12-dimethyl-10-thia-3,4,6,8-tetrazatricyclo[7.3.0.0^{2,6}]dodeca-1(9),2,4,7,11-pentaen-5-yl)sulfanyl]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YGI "Create component" 2023-06-14 RCSB YGI "Initial release" 2023-07-12 RCSB #