data_YGL # _chem_comp.id YGL _chem_comp.name "2-amino-5,6-diphenyl-3H-pyrrolo[2,3-d]pyrimidin-4(7H)-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H14 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-01-15 _chem_comp.pdbx_modified_date 2015-01-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 302.330 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YGL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4CM9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YGL CAK CAK C 0 1 Y N N 1.807 -15.478 31.320 -0.621 -2.331 -0.982 CAK YGL 1 YGL CAG CAG C 0 1 Y N N 2.490 -16.689 31.254 -1.344 -3.504 -0.917 CAG YGL 2 YGL CAD CAD C 0 1 Y N N 3.179 -17.150 32.375 -2.117 -3.783 0.197 CAD YGL 3 YGL CAH CAH C 0 1 Y N N 3.171 -16.390 33.543 -2.170 -2.889 1.251 CAH YGL 4 YGL CAL CAL C 0 1 Y N N 2.491 -15.168 33.593 -1.452 -1.712 1.198 CAL YGL 5 YGL CAR CAR C 0 1 Y N N 1.804 -14.668 32.481 -0.670 -1.425 0.078 CAR YGL 6 YGL CAT CAT C 0 1 Y N N 1.180 -13.450 32.442 0.103 -0.165 0.015 CAT YGL 7 YGL CAW CAW C 0 1 Y N N 0.269 -12.840 33.310 1.563 -0.026 0.015 CAW YGL 8 YGL CAU CAU C 0 1 N N N -0.384 -13.153 34.484 2.639 -0.939 0.070 CAU YGL 9 YGL OAB OAB O 0 1 N N N -0.246 -14.216 35.102 2.438 -2.140 0.133 OAB YGL 10 YGL NAN NAN N 0 1 N N N -1.276 -12.230 35.064 3.898 -0.446 0.050 NAN YGL 11 YGL CAP CAP C 0 1 N N N -1.534 -10.988 34.425 4.105 0.900 -0.022 CAP YGL 12 YGL NAA NAA N 0 1 N N N -2.401 -10.101 34.953 5.392 1.373 -0.040 NAA YGL 13 YGL NAM NAM N 0 1 N N N -0.857 -10.711 33.292 3.111 1.758 -0.073 NAM YGL 14 YGL CAV CAV C 0 1 Y N N 0.006 -11.602 32.766 1.835 1.347 -0.057 CAV YGL 15 YGL NAO NAO N 0 1 Y N N 0.710 -11.486 31.636 0.642 2.011 -0.100 NAO YGL 16 YGL CAS CAS C 0 1 Y N N 1.463 -12.575 31.416 -0.405 1.117 -0.062 CAS YGL 17 YGL CAQ CAQ C 0 1 Y N N 2.266 -12.728 30.290 -1.837 1.471 -0.096 CAQ YGL 18 YGL CAI CAI C 0 1 Y N N 1.823 -12.214 29.055 -2.328 2.489 0.725 CAI YGL 19 YGL CAE CAE C 0 1 Y N N 2.528 -12.339 27.858 -3.667 2.815 0.689 CAE YGL 20 YGL CAC CAC C 0 1 Y N N 3.720 -13.064 27.836 -4.525 2.135 -0.158 CAC YGL 21 YGL CAF CAF C 0 1 Y N N 4.197 -13.593 29.027 -4.047 1.125 -0.974 CAF YGL 22 YGL CAJ CAJ C 0 1 Y N N 3.469 -13.439 30.225 -2.708 0.793 -0.953 CAJ YGL 23 YGL HAK HAK H 0 1 N N N 1.258 -15.143 30.452 -0.015 -2.116 -1.850 HAK YGL 24 YGL HAG HAG H 0 1 N N N 2.486 -17.267 30.342 -1.308 -4.206 -1.737 HAG YGL 25 YGL HAD HAD H 0 1 N N N 3.714 -18.087 32.338 -2.681 -4.703 0.243 HAD YGL 26 YGL HAH HAH H 0 1 N N N 3.694 -16.747 34.418 -2.775 -3.112 2.117 HAH YGL 27 YGL HAL HAL H 0 1 N N N 2.496 -14.598 34.510 -1.494 -1.015 2.021 HAL YGL 28 YGL HAN HAN H 0 1 N N N -1.729 -12.450 35.928 4.655 -1.051 0.086 HAN YGL 29 YGL HAA1 HAA1 H 0 0 N N N -2.551 -9.220 34.504 6.137 0.753 -0.003 HAA1 YGL 30 YGL HAA2 HAA2 H 0 0 N N N -2.894 -10.324 35.794 5.557 2.327 -0.090 HAA2 YGL 31 YGL HAO HAO H 0 1 N N N 0.680 -10.690 31.032 0.546 2.974 -0.152 HAO YGL 32 YGL HAI HAI H 0 1 N N N 0.879 -11.691 29.034 -1.659 3.020 1.387 HAI YGL 33 YGL HAJ HAJ H 0 1 N N N 3.856 -13.888 31.128 -2.335 0.008 -1.593 HAJ YGL 34 YGL HAE HAE H 0 1 N N N 2.154 -11.878 26.955 -4.048 3.602 1.323 HAE YGL 35 YGL HAC HAC H 0 1 N N N 4.260 -13.210 26.912 -5.573 2.395 -0.182 HAC YGL 36 YGL HAF HAF H 0 1 N N N 5.135 -14.128 29.037 -4.722 0.599 -1.632 HAF YGL 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YGL CAK CAG SING Y N 1 YGL CAK CAR DOUB Y N 2 YGL CAG CAD DOUB Y N 3 YGL CAD CAH SING Y N 4 YGL CAH CAL DOUB Y N 5 YGL CAL CAR SING Y N 6 YGL CAR CAT SING N N 7 YGL CAT CAW SING Y N 8 YGL CAT CAS DOUB Y N 9 YGL CAW CAU SING N N 10 YGL CAW CAV DOUB Y N 11 YGL CAU OAB DOUB N N 12 YGL CAU NAN SING N N 13 YGL NAN CAP SING N N 14 YGL CAP NAA SING N N 15 YGL CAP NAM DOUB N N 16 YGL NAM CAV SING N N 17 YGL CAV NAO SING Y N 18 YGL NAO CAS SING Y N 19 YGL CAS CAQ SING N N 20 YGL CAQ CAI SING Y N 21 YGL CAQ CAJ DOUB Y N 22 YGL CAI CAE DOUB Y N 23 YGL CAE CAC SING Y N 24 YGL CAC CAF DOUB Y N 25 YGL CAF CAJ SING Y N 26 YGL CAK HAK SING N N 27 YGL CAG HAG SING N N 28 YGL CAD HAD SING N N 29 YGL CAH HAH SING N N 30 YGL CAL HAL SING N N 31 YGL NAN HAN SING N N 32 YGL NAA HAA1 SING N N 33 YGL NAA HAA2 SING N N 34 YGL NAO HAO SING N N 35 YGL CAI HAI SING N N 36 YGL CAJ HAJ SING N N 37 YGL CAE HAE SING N N 38 YGL CAC HAC SING N N 39 YGL CAF HAF SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YGL SMILES ACDLabs 12.01 "O=C1c2c(c(nc2N=C(N)N1)c3ccccc3)c4ccccc4" YGL InChI InChI 1.03 "InChI=1S/C18H14N4O/c19-18-21-16-14(17(23)22-18)13(11-7-3-1-4-8-11)15(20-16)12-9-5-2-6-10-12/h1-10H,(H4,19,20,21,22,23)" YGL InChIKey InChI 1.03 XTJRPOFKSXCKPF-UHFFFAOYSA-N YGL SMILES_CANONICAL CACTVS 3.385 "NC1=Nc2[nH]c(c3ccccc3)c(c4ccccc4)c2C(=O)N1" YGL SMILES CACTVS 3.385 "NC1=Nc2[nH]c(c3ccccc3)c(c4ccccc4)c2C(=O)N1" YGL SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1ccc(cc1)c2c3c([nH]c2c4ccccc4)N=C(NC3=O)N" YGL SMILES "OpenEye OEToolkits" 1.9.2 "c1ccc(cc1)c2c3c([nH]c2c4ccccc4)N=C(NC3=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YGL "SYSTEMATIC NAME" ACDLabs 12.01 "2-amino-5,6-diphenyl-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one" YGL "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "2-azanyl-5,6-diphenyl-3,7-dihydropyrrolo[2,3-d]pyrimidin-4-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YGL "Create component" 2014-01-15 EBI YGL "Modify descriptor" 2014-09-05 RCSB YGL "Initial release" 2015-01-21 RCSB #