data_YH1 # _chem_comp.id YH1 _chem_comp.name "2-amino-8-[(2-oxo-2-phenylethyl)sulfanyl]-1,9-dihydro-6H-purin-6-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H11 N5 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-09-03 _chem_comp.pdbx_modified_date 2014-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 301.324 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YH1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4M5G _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YH1 N01 N01 N 0 1 N N N 54.751 6.342 32.009 4.688 1.522 -0.002 N01 YH1 1 YH1 C02 C02 C 0 1 N N N 54.246 7.281 31.193 5.287 0.298 -0.001 C02 YH1 2 YH1 N03 N03 N 0 1 N N N 54.662 8.537 31.177 4.590 -0.816 0.000 N03 YH1 3 YH1 C04 C04 C 0 1 Y N N 55.653 8.865 32.045 3.252 -0.794 0.000 C04 YH1 4 YH1 C05 C05 C 0 1 Y N N 56.209 7.935 32.899 2.579 0.431 -0.001 C05 YH1 5 YH1 C06 C06 C 0 1 N N N 55.729 6.608 32.872 3.340 1.621 -0.002 C06 YH1 6 YH1 O07 O07 O 0 1 N N N 56.225 5.640 33.692 2.794 2.712 0.003 O07 YH1 7 YH1 N08 N08 N 0 1 N N N 53.209 6.913 30.315 6.659 0.227 -0.001 N08 YH1 8 YH1 N09 N09 N 0 1 Y N N 56.284 10.044 32.265 2.282 -1.766 0.001 N09 YH1 9 YH1 C10 C10 C 0 1 Y N N 57.185 9.833 33.224 1.067 -1.134 0.001 C10 YH1 10 YH1 N11 N11 N 0 1 Y N N 57.169 8.564 33.648 1.247 0.163 -0.000 N11 YH1 11 YH1 S12 S12 S 0 1 N N N 58.190 11.124 33.804 -0.498 -1.944 0.001 S12 YH1 12 YH1 C13 C13 C 0 1 N N N 57.123 12.571 33.770 -1.596 -0.504 -0.000 C13 YH1 13 YH1 C14 C14 C 0 1 N N N 55.739 12.596 34.381 -3.030 -0.967 -0.000 C14 YH1 14 YH1 C15 C15 C 0 1 Y N N 54.913 13.855 34.427 -4.121 0.020 -0.001 C15 YH1 15 YH1 O16 O16 O 0 1 N N N 55.255 11.573 34.846 -3.285 -2.152 -0.000 O16 YH1 16 YH1 C17 C17 C 0 1 Y N N 53.556 13.785 34.730 -5.454 -0.405 -0.001 C17 YH1 17 YH1 C18 C18 C 0 1 Y N N 52.776 14.936 34.780 -6.471 0.526 -0.001 C18 YH1 18 YH1 C19 C19 C 0 1 Y N N 53.350 16.169 34.518 -6.176 1.879 -0.001 C19 YH1 19 YH1 C20 C20 C 0 1 Y N N 54.700 16.252 34.213 -4.860 2.307 -0.001 C20 YH1 20 YH1 C21 C21 C 0 1 Y N N 55.479 15.099 34.170 -3.832 1.388 0.005 C21 YH1 21 YH1 H1 H1 H 0 1 N N N 54.381 5.414 31.967 5.231 2.326 0.002 H1 YH1 22 YH1 H2 H2 H 0 1 N N N 52.808 7.594 29.702 7.187 1.041 -0.002 H2 YH1 23 YH1 H3 H3 H 0 1 N N N 52.874 5.971 30.304 7.100 -0.637 -0.001 H3 YH1 24 YH1 H4 H4 H 0 1 N N N 56.107 10.909 31.796 2.431 -2.724 0.002 H4 YH1 25 YH1 H6 H6 H 0 1 N N N 57.687 13.374 34.268 -1.408 0.096 0.890 H6 YH1 26 YH1 H7 H7 H 0 1 N N N 56.988 12.822 32.707 -1.407 0.096 -0.890 H7 YH1 27 YH1 H8 H8 H 0 1 N N N 53.103 12.825 34.929 -5.685 -1.460 -0.002 H8 YH1 28 YH1 H9 H9 H 0 1 N N N 51.726 14.868 35.022 -7.500 0.200 -0.001 H9 YH1 29 YH1 H10 H10 H 0 1 N N N 52.747 17.064 34.551 -6.977 2.603 -0.002 H10 YH1 30 YH1 H11 H11 H 0 1 N N N 55.148 17.213 34.008 -4.637 3.364 -0.002 H11 YH1 31 YH1 H12 H12 H 0 1 N N N 56.531 15.171 33.935 -2.805 1.724 0.005 H12 YH1 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YH1 N08 C02 SING N N 1 YH1 N03 C02 DOUB N N 2 YH1 N03 C04 SING N N 3 YH1 C02 N01 SING N N 4 YH1 N01 C06 SING N N 5 YH1 C04 N09 SING Y N 6 YH1 C04 C05 DOUB Y N 7 YH1 N09 C10 SING Y N 8 YH1 C06 C05 SING N N 9 YH1 C06 O07 DOUB N N 10 YH1 C05 N11 SING Y N 11 YH1 C10 N11 DOUB Y N 12 YH1 C10 S12 SING N N 13 YH1 C13 S12 SING N N 14 YH1 C13 C14 SING N N 15 YH1 C21 C20 DOUB Y N 16 YH1 C21 C15 SING Y N 17 YH1 C20 C19 SING Y N 18 YH1 C14 C15 SING N N 19 YH1 C14 O16 DOUB N N 20 YH1 C15 C17 DOUB Y N 21 YH1 C19 C18 DOUB Y N 22 YH1 C17 C18 SING Y N 23 YH1 N01 H1 SING N N 24 YH1 N08 H2 SING N N 25 YH1 N08 H3 SING N N 26 YH1 N09 H4 SING N N 27 YH1 C13 H6 SING N N 28 YH1 C13 H7 SING N N 29 YH1 C17 H8 SING N N 30 YH1 C18 H9 SING N N 31 YH1 C19 H10 SING N N 32 YH1 C20 H11 SING N N 33 YH1 C21 H12 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YH1 SMILES ACDLabs 12.01 "O=C(c1ccccc1)CSc3nc2c(N=C(N)NC2=O)n3" YH1 InChI InChI 1.03 "InChI=1S/C13H11N5O2S/c14-12-16-10-9(11(20)18-12)15-13(17-10)21-6-8(19)7-4-2-1-3-5-7/h1-5H,6H2,(H4,14,15,16,17,18,20)" YH1 InChIKey InChI 1.03 NKOHKWPHYBOMJX-UHFFFAOYSA-N YH1 SMILES_CANONICAL CACTVS 3.385 "NC1=Nc2[nH]c(SCC(=O)c3ccccc3)nc2C(=O)N1" YH1 SMILES CACTVS 3.385 "NC1=Nc2[nH]c(SCC(=O)c3ccccc3)nc2C(=O)N1" YH1 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)C(=O)CSc2[nH]c3c(n2)C(=O)NC(=N3)N" YH1 SMILES "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)C(=O)CSc2[nH]c3c(n2)C(=O)NC(=N3)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YH1 "SYSTEMATIC NAME" ACDLabs 12.01 "2-amino-8-[(2-oxo-2-phenylethyl)sulfanyl]-1,9-dihydro-6H-purin-6-one" YH1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 2-azanyl-8-phenacylsulfanyl-1,9-dihydropurin-6-one # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YH1 "Create component" 2013-09-03 RCSB YH1 "Initial release" 2014-04-02 RCSB #