data_YH3 # _chem_comp.id YH3 _chem_comp.name "2-amino-8-{[2-(3-methylphenyl)-2-oxoethyl]sulfanyl}-1,9-dihydro-6H-purin-6-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H13 N5 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-09-04 _chem_comp.pdbx_modified_date 2014-03-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 315.350 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YH3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4M5K _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YH3 O16 O16 O 0 1 N N N 54.267 12.358 34.599 -2.927 2.157 -0.001 O16 YH3 1 YH3 C14 C14 C 0 1 N N N 54.797 13.416 34.291 -2.673 0.971 0.002 C14 YH3 2 YH3 C15 C15 C 0 1 Y N N 53.933 14.655 34.364 -3.765 -0.015 0.003 C15 YH3 3 YH3 C17 C17 C 0 1 Y N N 52.644 14.571 34.902 -5.097 0.411 0.000 C17 YH3 4 YH3 C18 C18 C 0 1 Y N N 51.812 15.688 34.987 -6.115 -0.519 0.001 C18 YH3 5 YH3 C22 C22 C 0 1 N N N 50.439 15.582 35.574 -7.551 -0.062 -0.002 C22 YH3 6 YH3 C19 C19 C 0 1 Y N N 52.261 16.913 34.522 -5.821 -1.871 0.004 C19 YH3 7 YH3 C20 C20 C 0 1 Y N N 53.536 17.015 33.984 -4.505 -2.301 0.006 C20 YH3 8 YH3 C21 C21 C 0 1 Y N N 54.364 15.898 33.903 -3.476 -1.384 0.001 C21 YH3 9 YH3 C13 C13 C 0 1 N N N 56.251 13.431 33.850 -1.239 0.507 -0.001 C13 YH3 10 YH3 S12 S12 S 0 1 N N N 57.341 11.995 33.795 -0.140 1.946 -0.001 S12 YH3 11 YH3 C10 C10 C 0 1 Y N N 56.375 10.696 33.161 1.425 1.135 -0.005 C10 YH3 12 YH3 N09 N09 N 0 1 Y N N 55.504 10.904 32.174 2.640 1.765 -0.001 N09 YH3 13 YH3 C04 C04 C 0 1 Y N N 54.899 9.715 31.925 3.609 0.793 0.000 C04 YH3 14 YH3 C05 C05 C 0 1 Y N N 55.428 8.773 32.784 2.935 -0.432 -0.004 C05 YH3 15 YH3 N11 N11 N 0 1 Y N N 56.359 9.415 33.562 1.603 -0.162 -0.007 N11 YH3 16 YH3 N03 N03 N 0 1 N N N 53.950 9.390 31.015 4.947 0.813 0.004 N03 YH3 17 YH3 C02 C02 C 0 1 N N N 53.519 8.137 31.003 5.643 -0.302 0.004 C02 YH3 18 YH3 N08 N08 N 0 1 N N N 52.508 7.784 30.090 7.015 -0.232 0.008 N08 YH3 19 YH3 N01 N01 N 0 1 N N N 53.994 7.187 31.819 5.042 -1.525 0.000 N01 YH3 20 YH3 C06 C06 C 0 1 N N N 54.950 7.451 32.712 3.694 -1.623 -0.004 C06 YH3 21 YH3 O07 O07 O 0 1 N N N 55.426 6.478 33.538 3.147 -2.713 -0.007 O07 YH3 22 YH3 H1 H1 H 0 1 N N N 52.284 13.618 35.260 -5.328 1.466 -0.002 H1 YH3 23 YH3 H2 H2 H 0 1 N N N 49.718 15.341 34.779 -7.896 0.046 -1.031 H2 YH3 24 YH3 H3 H3 H 0 1 N N N 50.426 14.787 36.335 -8.168 -0.799 0.512 H3 YH3 25 YH3 H4 H4 H 0 1 N N N 50.165 16.540 36.040 -7.628 0.897 0.509 H4 YH3 26 YH3 H5 H5 H 0 1 N N N 51.623 17.783 34.578 -6.623 -2.595 0.004 H5 YH3 27 YH3 H6 H6 H 0 1 N N N 53.890 17.970 33.625 -4.284 -3.359 0.009 H6 YH3 28 YH3 H7 H7 H 0 1 N N N 55.352 15.996 33.478 -2.450 -1.721 0.002 H7 YH3 29 YH3 H8 H8 H 0 1 N N N 56.750 14.150 34.516 -1.050 -0.095 0.888 H8 YH3 30 YH3 H9 H9 H 0 1 N N N 56.240 13.828 32.824 -1.053 -0.092 -0.892 H9 YH3 31 YH3 H10 H10 H 0 1 N N N 55.330 11.771 31.706 2.790 2.724 0.001 H10 YH3 32 YH3 H12 H12 H 0 1 N N N 52.132 8.472 29.470 7.457 0.631 0.011 H12 YH3 33 YH3 H13 H13 H 0 1 N N N 52.166 6.845 30.061 7.542 -1.047 0.008 H13 YH3 34 YH3 H14 H14 H 0 1 N N N 53.624 6.260 31.758 5.585 -2.330 -0.000 H14 YH3 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YH3 N08 C02 SING N N 1 YH3 C02 N03 DOUB N N 2 YH3 C02 N01 SING N N 3 YH3 N03 C04 SING N N 4 YH3 N01 C06 SING N N 5 YH3 C04 N09 SING Y N 6 YH3 C04 C05 DOUB Y N 7 YH3 N09 C10 SING Y N 8 YH3 C06 C05 SING N N 9 YH3 C06 O07 DOUB N N 10 YH3 C05 N11 SING Y N 11 YH3 C10 N11 DOUB Y N 12 YH3 C10 S12 SING N N 13 YH3 S12 C13 SING N N 14 YH3 C13 C14 SING N N 15 YH3 C21 C20 DOUB Y N 16 YH3 C21 C15 SING Y N 17 YH3 C20 C19 SING Y N 18 YH3 C14 C15 SING N N 19 YH3 C14 O16 DOUB N N 20 YH3 C15 C17 DOUB Y N 21 YH3 C19 C18 DOUB Y N 22 YH3 C17 C18 SING Y N 23 YH3 C18 C22 SING N N 24 YH3 C17 H1 SING N N 25 YH3 C22 H2 SING N N 26 YH3 C22 H3 SING N N 27 YH3 C22 H4 SING N N 28 YH3 C19 H5 SING N N 29 YH3 C20 H6 SING N N 30 YH3 C21 H7 SING N N 31 YH3 C13 H8 SING N N 32 YH3 C13 H9 SING N N 33 YH3 N09 H10 SING N N 34 YH3 N08 H12 SING N N 35 YH3 N08 H13 SING N N 36 YH3 N01 H14 SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YH3 SMILES ACDLabs 12.01 "O=C(c1cccc(c1)C)CSc3nc2c(N=C(N)NC2=O)n3" YH3 InChI InChI 1.03 "InChI=1S/C14H13N5O2S/c1-7-3-2-4-8(5-7)9(20)6-22-14-16-10-11(18-14)17-13(15)19-12(10)21/h2-5H,6H2,1H3,(H4,15,16,17,18,19,21)" YH3 InChIKey InChI 1.03 KDLSQBTYPBZMRM-UHFFFAOYSA-N YH3 SMILES_CANONICAL CACTVS 3.385 "Cc1cccc(c1)C(=O)CSc2[nH]c3N=C(N)NC(=O)c3n2" YH3 SMILES CACTVS 3.385 "Cc1cccc(c1)C(=O)CSc2[nH]c3N=C(N)NC(=O)c3n2" YH3 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1cccc(c1)C(=O)CSc2[nH]c3c(n2)C(=O)NC(=N3)N" YH3 SMILES "OpenEye OEToolkits" 1.7.6 "Cc1cccc(c1)C(=O)CSc2[nH]c3c(n2)C(=O)NC(=N3)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YH3 "SYSTEMATIC NAME" ACDLabs 12.01 "2-amino-8-{[2-(3-methylphenyl)-2-oxoethyl]sulfanyl}-1,9-dihydro-6H-purin-6-one" YH3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-azanyl-8-[2-(3-methylphenyl)-2-oxidanylidene-ethyl]sulfanyl-1,9-dihydropurin-6-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YH3 "Create component" 2013-09-04 RCSB YH3 "Initial release" 2014-04-02 RCSB #