data_YHC # _chem_comp.id YHC _chem_comp.name "~{N}-[2-chloranyl-4-(trifluoromethyl)phenyl]-2-[2-(3,6-dihydro-2~{H}-pyran-4-yl)-5-ethyl-6-[4-(6-methyl-5-oxidanyl-pyrimidin-4-yl)carbonylpiperazin-1-yl]-7-oxidanylidene-[1,2,4]triazolo[1,5-a]pyrimidin-4-yl]ethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H31 Cl F3 N9 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-06-16 _chem_comp.pdbx_modified_date 2024-04-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 702.083 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YHC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PFO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YHC C1 C1 C 0 1 N N N N N N -6.380 0.911 25.111 -0.994 0.063 -3.718 C1 YHC 1 YHC C2 C2 C 0 1 N N N N N N -6.148 0.029 23.872 -0.654 -0.317 -2.276 C2 YHC 2 YHC C3 C3 C 0 1 N N N N N N -6.647 -1.378 24.084 -0.414 0.934 -1.470 C3 YHC 3 YHC C42 C4 C 0 1 Y N N N N N 0.450 -2.093 25.762 -6.867 -1.180 0.640 C42 YHC 4 YHC C44 C5 C 0 1 Y N N N N N 1.970 -1.245 24.312 -6.294 -2.815 2.155 C44 YHC 5 YHC C46 C6 C 0 1 Y N N N N N 2.297 -3.384 24.969 -8.361 -2.981 1.163 C46 YHC 6 YHC C47 C7 C 0 1 N N N N N N 3.084 -4.658 24.891 -9.673 -3.705 0.995 C47 YHC 7 YHC C48 C8 C 0 1 Y N N N N N 1.146 -3.289 25.766 -8.102 -1.813 0.446 C48 YHC 8 YHC C11 C9 C 0 1 Y N N N N N -8.304 -3.081 23.808 1.071 2.604 -0.653 C11 YHC 9 YHC C13 C10 C 0 1 N N N N N N -8.917 -0.800 23.120 1.959 0.808 -2.078 C13 YHC 10 YHC C14 C11 C 0 1 N N N N N N -9.839 -0.427 24.267 2.600 -0.202 -1.162 C14 YHC 11 YHC C17 C12 C 0 1 Y N N N N N -11.765 1.025 24.820 4.185 -1.936 -0.778 C17 YHC 12 YHC C18 C13 C 0 1 Y N N N N N -13.106 1.001 24.436 4.206 -1.779 0.601 C18 YHC 13 YHC C19 C14 C 0 1 Y N N N N N -14.086 1.441 25.307 4.728 -2.777 1.401 C19 YHC 14 YHC C20 C15 C 0 1 Y N N N N N -13.757 1.920 26.570 5.227 -3.933 0.830 C20 YHC 15 YHC C21 C16 C 0 1 Y N N N N N -12.426 1.950 26.969 5.208 -4.094 -0.544 C21 YHC 16 YHC C22 C17 C 0 1 Y N N N N N -11.450 1.511 26.096 4.688 -3.099 -1.350 C22 YHC 17 YHC C24 C18 C 0 1 N N N N N N -14.818 2.445 27.484 5.795 -5.020 1.706 C24 YHC 18 YHC C28 C19 C 0 1 N N N N N N -10.344 -5.922 23.766 2.834 5.366 0.834 C28 YHC 19 YHC C29 C20 C 0 1 N N N N N N -10.196 -7.247 24.485 2.342 6.485 1.709 C29 YHC 20 YHC C30 C21 C 0 1 N N N N N N -11.463 -8.124 24.303 3.531 7.153 2.406 C30 YHC 21 YHC C4 C22 C 0 1 N N N N N N -5.841 -2.318 24.697 -1.444 1.536 -0.828 C4 YHC 22 YHC C5 C23 C 0 1 N N N N N N -6.229 -3.699 24.894 -1.205 2.710 -0.074 C5 YHC 23 YHC O6 O1 O 0 1 N N N N N N -5.541 -4.583 25.399 -2.122 3.260 0.509 O6 YHC 24 YHC N7 N1 N 0 1 Y N N N N N -7.501 -3.978 24.411 0.040 3.214 -0.004 N7 YHC 25 YHC N8 N2 N 0 1 Y N N N N N -8.126 -5.195 24.501 0.581 4.336 0.640 N8 YHC 26 YHC C9 C24 C 0 1 Y N N N N N -9.294 -4.923 23.915 1.868 4.352 0.361 C9 YHC 27 YHC N10 N3 N 0 1 Y N N N N N -9.445 -3.628 23.467 2.161 3.304 -0.421 N10 YHC 28 YHC N12 N4 N 0 1 N N N N N N -7.933 -1.760 23.631 0.846 1.460 -1.383 N12 YHC 29 YHC O15 O2 O 0 1 N N N N N N -9.695 -0.938 25.376 2.170 -0.362 -0.039 O15 YHC 30 YHC N16 N5 N 0 1 N N N N N N -10.745 0.531 23.975 3.652 -0.928 -1.591 N16 YHC 31 YHC CL23 CL1 CL 0 0 N N N N N N -9.792 1.618 26.596 4.663 -3.301 -3.074 CL23 YHC 32 YHC F25 F1 F 0 1 N N N N N N -15.999 1.905 27.245 6.338 -4.450 2.862 F25 YHC 33 YHC F26 F2 F 0 1 N N N N N N -14.552 2.208 28.783 4.778 -5.913 2.059 F26 YHC 34 YHC F27 F3 F 0 1 N N N N N N -14.989 3.769 27.361 6.796 -5.705 1.009 F27 YHC 35 YHC O31 O3 O 0 1 N N N N N N -12.016 -7.986 22.983 4.540 7.419 1.424 O31 YHC 36 YHC C32 C25 C 0 1 N N N N N N -12.473 -6.661 22.723 5.151 6.233 0.913 C32 YHC 37 YHC C33 C26 C 0 1 N N N N N N -11.425 -5.641 23.006 4.095 5.260 0.470 C33 YHC 38 YHC N34 N6 N 0 1 N N N N N N -4.571 -2.161 25.140 -2.742 0.997 -0.909 N34 YHC 39 YHC C35 C27 C 0 1 N N N N N N -4.280 -2.013 26.581 -3.043 -0.319 -0.329 C35 YHC 40 YHC C36 C28 C 0 1 N N N N N N -3.086 -1.090 26.798 -4.212 -0.166 0.652 C36 YHC 41 YHC N37 N7 N 0 1 N N N N N N -1.945 -1.540 25.996 -5.290 0.579 -0.014 N37 YHC 42 YHC C38 C29 C 0 1 N N N N N N -2.245 -1.532 24.559 -4.988 1.895 -0.594 C38 YHC 43 YHC C39 C30 C 0 1 N N N N N N -3.422 -2.470 24.265 -3.821 1.744 -1.570 C39 YHC 44 YHC C40 C31 C 0 1 N N N N N N -0.797 -1.934 26.594 -6.533 0.063 -0.092 C40 YHC 45 YHC O41 O4 O 0 1 N N N N N N -0.728 -2.158 27.797 -7.380 0.619 -0.763 O41 YHC 46 YHC N43 N8 N 0 1 Y N N N N N 0.862 -1.041 25.031 -6.000 -1.714 1.499 N43 YHC 47 YHC N45 N9 N 0 1 Y N N N N N 2.719 -2.350 24.236 -7.447 -3.438 1.998 N45 YHC 48 YHC O49 O5 O 0 1 N N N N N N 0.765 -4.331 26.549 -9.019 -1.303 -0.414 O49 YHC 49 YHC H1 H1 H 0 1 N N N N N N -6.003 1.926 24.915 -1.892 0.680 -3.729 H1 YHC 50 YHC H2 H2 H 0 1 N N N N N N -7.457 0.956 25.332 -0.164 0.620 -4.153 H2 YHC 51 YHC H3 H3 H 0 1 N N N N N N -5.846 0.482 25.972 -1.168 -0.842 -4.301 H3 YHC 52 YHC H4 H4 H 0 1 N N N N N N -5.070 -0.004 23.656 -1.484 -0.875 -1.842 H4 YHC 53 YHC H5 H5 H 0 1 N N N N N N -6.680 0.470 23.016 0.244 -0.935 -2.265 H5 YHC 54 YHC H6 H6 H 0 1 N N N N N N 2.304 -0.409 23.715 -5.569 -3.222 2.845 H6 YHC 55 YHC H7 H7 H 0 1 N N N N N N 3.931 -4.525 24.202 -9.584 -4.437 0.193 H7 YHC 56 YHC H8 H8 H 0 1 N N N N N N 3.462 -4.917 25.891 -9.928 -4.214 1.925 H8 YHC 57 YHC H9 H9 H 0 1 N N N N N N 2.436 -5.467 24.523 -10.455 -2.987 0.747 H9 YHC 58 YHC H10 H10 H 0 1 N N N N N N -8.404 0.098 22.745 2.697 1.557 -2.365 H10 YHC 59 YHC H11 H11 H 0 1 N N N N N N -9.498 -1.257 22.306 1.586 0.305 -2.970 H11 YHC 60 YHC H12 H12 H 0 1 N N N N N N -13.379 0.638 23.456 3.816 -0.876 1.048 H12 YHC 61 YHC H13 H13 H 0 1 N N N N N N -15.122 1.412 25.002 4.745 -2.655 2.474 H13 YHC 62 YHC H14 H14 H 0 1 N N N N N N -12.158 2.312 27.950 5.600 -4.997 -0.987 H14 YHC 63 YHC H15 H15 H 0 1 N N N N N N -9.326 -7.783 24.077 1.819 7.221 1.098 H15 YHC 64 YHC H16 H16 H 0 1 N N N N N N -10.040 -7.059 25.557 1.659 6.086 2.460 H16 YHC 65 YHC H17 H17 H 0 1 N N N N N N -12.219 -7.817 25.041 3.209 8.089 2.863 H17 YHC 66 YHC H18 H18 H 0 1 N N N N N N -11.195 -9.178 24.470 3.927 6.488 3.173 H18 YHC 67 YHC H19 H19 H 0 1 N N N N N N -10.688 0.935 23.062 4.040 -0.753 -2.462 H19 YHC 68 YHC H20 H20 H 0 1 N N N N N N -12.763 -6.587 21.665 5.782 6.489 0.062 H20 YHC 69 YHC H21 H21 H 0 1 N N N N N N -13.348 -6.456 23.358 5.764 5.778 1.691 H21 YHC 70 YHC H22 H22 H 0 1 N N N N N N -11.532 -4.649 22.592 4.384 4.435 -0.165 H22 YHC 71 YHC H23 H23 H 0 1 N N N N N N -5.161 -1.589 27.085 -3.320 -1.013 -1.123 H23 YHC 72 YHC H24 H24 H 0 1 N N N N N N -4.054 -3.002 27.007 -2.168 -0.695 0.200 H24 YHC 73 YHC H25 H25 H 0 1 N N N N N N -2.808 -1.100 27.862 -4.575 -1.151 0.945 H25 YHC 74 YHC H26 H26 H 0 1 N N N N N N -3.359 -0.067 26.500 -3.879 0.379 1.535 H26 YHC 75 YHC H27 H27 H 0 1 N N N N N N -1.360 -1.871 24.000 -5.864 2.271 -1.124 H27 YHC 76 YHC H28 H28 H 0 1 N N N N N N -2.507 -0.510 24.247 -4.714 2.590 0.200 H28 YHC 77 YHC H29 H29 H 0 1 N N N N N N -3.726 -2.349 23.215 -3.459 2.730 -1.863 H29 YHC 78 YHC H30 H30 H 0 1 N N N N N N -3.106 -3.509 24.438 -4.150 1.196 -2.453 H30 YHC 79 YHC H31 H31 H 0 1 N N N N N N 0.164 -4.023 27.217 -8.937 -1.635 -1.318 H31 YHC 80 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YHC C32 O31 SING N N 1 YHC C32 C33 SING N N 2 YHC O31 C30 SING N N 3 YHC C33 C28 DOUB N N 4 YHC C13 N12 SING N N 5 YHC C13 C14 SING N N 6 YHC N10 C11 DOUB Y N 7 YHC N10 C9 SING Y N 8 YHC N12 C11 SING N N 9 YHC N12 C3 SING N N 10 YHC C28 C9 SING N N 11 YHC C28 C29 SING N N 12 YHC C11 N7 SING Y N 13 YHC C2 C3 SING N N 14 YHC C2 C1 SING N N 15 YHC C9 N8 DOUB Y N 16 YHC N16 C14 SING N N 17 YHC N16 C17 SING N N 18 YHC C3 C4 DOUB N N 19 YHC N45 C44 DOUB Y N 20 YHC N45 C46 SING Y N 21 YHC C39 C38 SING N N 22 YHC C39 N34 SING N N 23 YHC C14 O15 DOUB N N 24 YHC C30 C29 SING N N 25 YHC C44 N43 SING Y N 26 YHC N7 N8 SING Y N 27 YHC N7 C5 SING N N 28 YHC C18 C17 DOUB Y N 29 YHC C18 C19 SING Y N 30 YHC C38 N37 SING N N 31 YHC C4 C5 SING N N 32 YHC C4 N34 SING N N 33 YHC C17 C22 SING Y N 34 YHC C47 C46 SING N N 35 YHC C5 O6 DOUB N N 36 YHC C46 C48 DOUB Y N 37 YHC N43 C42 DOUB Y N 38 YHC N34 C35 SING N N 39 YHC C19 C20 DOUB Y N 40 YHC C42 C48 SING Y N 41 YHC C42 C40 SING N N 42 YHC C48 O49 SING N N 43 YHC N37 C40 SING N N 44 YHC N37 C36 SING N N 45 YHC C22 CL23 SING N N 46 YHC C22 C21 DOUB Y N 47 YHC C20 C21 SING Y N 48 YHC C20 C24 SING N N 49 YHC C35 C36 SING N N 50 YHC C40 O41 DOUB N N 51 YHC F25 C24 SING N N 52 YHC F27 C24 SING N N 53 YHC C24 F26 SING N N 54 YHC C1 H1 SING N N 55 YHC C1 H2 SING N N 56 YHC C1 H3 SING N N 57 YHC C2 H4 SING N N 58 YHC C2 H5 SING N N 59 YHC C44 H6 SING N N 60 YHC C47 H7 SING N N 61 YHC C47 H8 SING N N 62 YHC C47 H9 SING N N 63 YHC C13 H10 SING N N 64 YHC C13 H11 SING N N 65 YHC C18 H12 SING N N 66 YHC C19 H13 SING N N 67 YHC C21 H14 SING N N 68 YHC C29 H15 SING N N 69 YHC C29 H16 SING N N 70 YHC C30 H17 SING N N 71 YHC C30 H18 SING N N 72 YHC N16 H19 SING N N 73 YHC C32 H20 SING N N 74 YHC C32 H21 SING N N 75 YHC C33 H22 SING N N 76 YHC C35 H23 SING N N 77 YHC C35 H24 SING N N 78 YHC C36 H25 SING N N 79 YHC C36 H26 SING N N 80 YHC C38 H27 SING N N 81 YHC C38 H28 SING N N 82 YHC C39 H29 SING N N 83 YHC C39 H30 SING N N 84 YHC O49 H31 SING N N 85 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YHC InChI InChI 1.06 "InChI=1S/C31H31ClF3N9O5/c1-3-22-25(41-8-10-42(11-9-41)28(47)24-26(46)17(2)36-16-37-24)29(48)44-30(39-27(40-44)18-6-12-49-13-7-18)43(22)15-23(45)38-21-5-4-19(14-20(21)32)31(33,34)35/h4-6,14,16,46H,3,7-13,15H2,1-2H3,(H,38,45)" YHC InChIKey InChI 1.06 XKYVECRUZPCRQR-UHFFFAOYSA-N YHC SMILES_CANONICAL CACTVS 3.385 "CCC1=C(N2CCN(CC2)C(=O)c3ncnc(C)c3O)C(=O)n4nc(nc4N1CC(=O)Nc5ccc(cc5Cl)C(F)(F)F)C6=CCOCC6" YHC SMILES CACTVS 3.385 "CCC1=C(N2CCN(CC2)C(=O)c3ncnc(C)c3O)C(=O)n4nc(nc4N1CC(=O)Nc5ccc(cc5Cl)C(F)(F)F)C6=CCOCC6" YHC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC1=C(C(=O)n2c(nc(n2)C3=CCOCC3)N1CC(=O)Nc4ccc(cc4Cl)C(F)(F)F)N5CCN(CC5)C(=O)c6c(c(ncn6)C)O" YHC SMILES "OpenEye OEToolkits" 2.0.7 "CCC1=C(C(=O)n2c(nc(n2)C3=CCOCC3)N1CC(=O)Nc4ccc(cc4Cl)C(F)(F)F)N5CCN(CC5)C(=O)c6c(c(ncn6)C)O" # _pdbx_chem_comp_identifier.comp_id YHC _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[2-chloranyl-4-(trifluoromethyl)phenyl]-2-[2-(3,6-dihydro-2~{H}-pyran-4-yl)-5-ethyl-6-[4-(6-methyl-5-oxidanyl-pyrimidin-4-yl)carbonylpiperazin-1-yl]-7-oxidanylidene-[1,2,4]triazolo[1,5-a]pyrimidin-4-yl]ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YHC "Create component" 2023-06-16 PDBE YHC "Initial release" 2024-04-24 RCSB #